Limnobacter thiooxidans: RGQ30_15010
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Entry
RGQ30_15010 CDS
T09704
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
lto
Limnobacter thiooxidans
Pathway
lto02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RGQ30_15010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lto02000
]
RGQ30_15010
02044 Secretion system [BR:
lto02044
]
RGQ30_15010
Transporters [BR:
lto02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RGQ30_15010
Secretion system [BR:
lto02044
]
Type I secretion system
Adhesin protein transporter
RGQ30_15010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_18
AAA_28
AAA_22
DUF87
AAA_23
AAA
AAA_16
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BET26000
UniProt:
A0AA86J6V1
LinkDB
All DBs
Position
complement(1655757..1657895)
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AA seq
712 aa
AA seq
DB search
MLQDPRPIKPLQHALCDMLEQLGIEFLPSQWQMQESLLTPDEHTELALLQGYLDACGVPH
QIFKQVGADEVKHLGPYTLAMGHNGQTGSLQELLSGQDKKPSLLWALQLEGEGLQTAAPA
QPTEPPPVSLLNFWRKLRDSKWLREAMQFDNGNFKPVVYASLLINILALAGPLFSLQVYD
RIIPNQAYASLAALLAGVALCLGFEHFLKHARHRLMEFAATSIDTRCTSHLSQSLLNVPV
HKTEPSVLLQHLRSFEQLRELITGVFLLALIDLPFLVLFLGVITLIHPVFLLVSGGVILL
TLLLVVHSHRCLSCLGQEQMKQSRQTQSQWLDSLACLDNIQAQGVQQAHSKLLNNLQLKS
RMGGNAVRDQLFKVNQSIQLLQQGGWIFTIALGVYLIVEKQLTVGGLIAVSMLTMRCFAP
IQKLQGHLVQTHSAQASFEELDQFLGQQPKTQATRAALKGIEHIGIESASVVKPGQSPES
RQIGHFILRHITLELKPGDRVGIIGPTGSGKTSILKLLARQLACDAGHLAVNHLAIDHYH
PGEYNSKIGYATQPPSLIRGTLLENIRFNRPHIDTNACWSILDALGLKKWVEQHPDGIHM
RIENQGNNLSSGQKQSISLCRALVGQPELVLLDEPTVCLDQYMETRLIQYLQQLSTRQIL
VFTTHKLNLLSCAHSLILMNNSQIDTQGEKAKVLHQANTLAKQRDQQPGAIQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaagacccccgcccaatcaagccgcttcaacatgcgctatgcgacatgctggaa
caacttggcatcgagttcctgcccagccagtggcaaatgcaggaatctttgctcacccca
gatgaacacaccgaactggccctgcttcaaggttacctggacgcgtgcggggttccccat
caaatattcaagcaggttggcgcagacgaagtcaaacacctgggaccctacacactggcc
atgggccacaacggtcaaacaggcagccttcaggaattgctgagcggtcaagacaagaag
ccctcattgctctgggccctccaacttgaaggtgaaggattacaaacagctgcacctgca
caacctaccgaaccgccacctgtcagtctgctgaacttttggcgaaaattacgtgacagc
aaatggttgcgggaagccatgcagtttgacaatggcaacttcaagcccgtcgtgtatgca
tcgctgctgatcaacattctggccctggccggccccctgttttcacttcaggtttacgat
cgcatcatccctaaccaggcttatgcatcgcttgccgctttgctggctggtgttgcactt
tgcctaggctttgaacacttcctgaagcacgcccgtcaccgcctgatggaatttgcagcc
acctcgattgacactcgatgtacaagtcatttgtcgcagtcgctgctcaacgtgcccgtg
cacaaaaccgagcccagcgtgctgcttcaacacttgcgatctttcgagcaattgcgtgaa
ctgatcaccggtgtgttcttgctggccctgattgaccttccatttctggtgctttttctg
ggtgtcatcacgctgattcatccggtgttcctgcttgtttcgggcggtgtcattctgctc
accttgctgctggttgttcactcgcatcgttgcttgtcctgccttgggcaagaacagatg
aaacaatccaggcaaacacaaagccaatggctggattcattggcctgtctcgacaacatt
caggcccaaggtgtgcagcaggcccacagcaagctgctaaacaatctgcaactcaagtcc
cgcatgggcggcaatgccgtcagggaccaactgtttaaggtaaaccagtcgatccagttg
ttgcaacagggcggctggatattcaccattgcgcttggtgtttacctgattgttgaaaaa
cagttgactgtgggtggattgattgcagtgtccatgctcaccatgcggtgttttgcaccc
attcaaaaacttcagggacatcttgttcaaacccattctgcgcaagccagcttcgaagaa
ctggaccagtttctgggacagcaacccaaaactcaggccactcgcgcagcgctcaagggc
attgaacacatcggcatcgagtctgccagcgtggtgaaaccggggcaaagccctgaatca
cgacaaattggccatttcatccttcggcacatcacgcttgaattgaaaccaggcgaccgt
gtgggcatcatcggcccaacagggtcgggtaaaacctcgattctgaaattactagcccgt
cagctcgcttgcgatgcggggcaccttgctgtcaatcacctggcgatcgatcattaccac
cctggtgaatacaacagcaagattggctatgccacgcagcccccctccctgattcgcggc
acgctgctggagaacatccgctttaaccgaccccacattgacaccaatgcgtgctggtca
atactggacgcgttggggctcaagaagtgggttgaacaacacccggatggcatccacatg
cgcattgaaaatcagggcaacaacctgtcctctggacagaaacagagtatttcactgtgc
cgtgcgctggtggggcaacccgagcttgtcctgcttgatgaacccaccgtgtgcctggac
cagtacatggaaacgcgcctgatccagtacctacaacagctcagcacccggcaaatcctt
gtattcaccacccacaaactgaatttgctgagctgcgcccactcattgatattgatgaac
aacagccagattgatacgcaaggagaaaaggccaaggtacttcatcaagccaacaccctt
gccaaacaacgcgaccaacaaccgggggctattcaatga
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