Limnobacter thiooxidans: RGQ30_15110
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Entry
RGQ30_15110 CDS
T09704
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00630
Glyoxylate and dicarboxylate metabolism
lto00680
Methane metabolism
lto01100
Metabolic pathways
lto01120
Microbial metabolism in diverse environments
lto01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RGQ30_15110
09102 Energy metabolism
00680 Methane metabolism
RGQ30_15110
Enzymes [BR:
lto01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RGQ30_15110
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Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
ParE-like_toxin
Motif
Other DBs
NCBI-ProteinID:
BET26010
UniProt:
A0AA86J7M3
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All DBs
Position
1666345..1669284
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AA seq
979 aa
AA seq
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MLKKREDTTVGKAIPNHNHSLLNKIGSRLGATMDRRAFLKRSGIGVGAGAVAGSLPFGMV
RKAEAKAEGGTAGGKIEIKRTICSHCSVGCATDAVVQNGVWVRQNPVFDSPINLGAHCAK
GAALREHGHGEHRLKYPMKLVDGKYQKITWDEALDGITKKMLALREENGPDSLFFIGSSK
HSNEQAYLLRKWVSLWGTNNCDHQARICHSTTVAGVANTWGYGAMTNSYNDMQNTKCALY
IGSNAAEAHPVSMLHMLHAKETGAKMIVVDPRFTRTAARADEYVRIRSGSDIPFLFGMLY
HIFKNGWEDKKYINDRVYGMDQIKAEVMANWTPDKVEEACGVGEAQLYKVTEMMAKSKPS
TIVWCMGQTQHTIGNAIVRASCILQLALGNVGISGGGTNIFRGHCNVQGATDVGPNPDSL
PGYYGVAEGSWKHWCRVWGLDYEYVKSRYAEGMSTKGGMTVSRWVDGVLENPELIDQKAG
NLRGLFFWGHAPNSQTRGLDMKKAMDKLDLLVVVDPYPTAAAAMAAMPGDPAGLNPNREV
YLLPSTTQFESSGSITASNRSIQWREQVIEPLYDSRNDHMIMYQLAEKLGYAAELTKNLT
MVKGKGGMMQPEIESILREINKGTWTIGYTGQSPERLKLHMKNMHTFNVRTLKAEGGPCD
GEYFGLPWPCYGTPEMKHPGSPNLYQTDKHVMDGGGNFRANFGVEKDGVSLLAEDGSHSL
GAEITTGYPEFTADMLKQLGWWDDLTEAEKTEAEGKNWKTDLSGGIQRVVMKHGCHPFGN
AKARAVVWNFPDPIPKHREPLYSTKPDLVAKYPTHDDKAAFWRLPTLYKSVQEKNADIGK
SFPLIMTSGRLVEYEGGGEETRSNPWLAELQQTMFVELSPRAANDRGIKHGDQVRVTTPT
GAKIEVQALVTRRVGDDTVFLPFHFSGHWEGKDMISSYPEGSAPIVRGESVNTATTYGYD
VVTMMQETKTTVCQIEKLA
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaagagagaagacacaacagtgggcaaggcgattccaaaccacaatcacagc
ctgctcaataaaatcggttcacgcttgggtgccaccatggaccgccgcgcgttcctgaag
cgttcaggcattggcgtgggtgcgggtgctgttgcaggcagcttgccttttggcatggtc
cgcaaggccgaggccaaggctgaaggtggtactgcaggcgggaaaatcgagatcaagcgt
acaatttgctcccattgctcagtaggctgtgccacagacgcagtggttcagaatggcgtt
tgggttcgtcagaaccctgtattcgacagcccgatcaacctgggtgcacattgtgccaag
ggcgcagcgttgcgcgaacatggtcatggcgaacaccgcctgaagtaccccatgaagctg
gttgacggcaagtaccagaaaattacctgggacgaagctctggacggcatcaccaagaag
atgttggcactgcgtgaagagaacggccctgattcgctgttcttcattggttcctccaag
cacagcaacgagcaggcttacctgctgcgcaaatgggtctccctgtggggcaccaacaac
tgcgaccaccaggcgcgtatttgccactccaccacggtagctggtgtagccaatacctgg
ggttatggtgcaatgaccaactcctacaacgacatgcagaacaccaagtgtgcgttgtac
atcggctccaacgctgctgaggctcaccctgtatccatgctgcacatgttgcatgccaaa
gagacaggcgcaaaaatgattgttgtggatccacgttttacacgcacggcagcccgtgct
gatgaatacgtgcgtattcggtccggcagtgacattccattcctgttcggcatgctgtac
cacattttcaaaaatggctgggaagacaagaagtacatcaatgaccgtgtatatggcatg
gaccagatcaaggccgaggtgatggccaactggacgcccgacaaggtcgaagaggcttgt
ggcgtgggcgaagctcagttgtacaaggtcaccgaaatgatggccaaatccaagccatcg
accatcgtgtggtgtatgggtcaaacccagcacaccatcggtaacgccattgttcgtgcc
tcctgcatcttgcaactggccttgggcaacgtcggtatttccggtggtggtaccaacatt
ttccgcggtcactgtaacgttcaaggcgccacagacgtgggcccgaacccggattcactg
cctggctactatggcgtggcagagggttcctggaagcactggtgccgtgtgtggggactg
gactacgaatacgtcaagagccgctatgctgaaggcatgagcaccaagggcggtatgaca
gtctcgcgctgggtagacggtgtgcttgagaacccggaactgatcgatcagaaagcaggc
aacctgcgtggcttgttcttctgggggcatgccccgaactcgcaaacccgtggtctggac
atgaaaaaagccatggacaagctggatttgctggttgtggtcgatccttacccaaccgca
gcagcagccatggccgcgatgccaggcgaccctgcaggtttgaacccgaatcgtgaagtg
tacctgttgccatcgacaacacagttcgagtcatcaggttcaatcactgcgtcaaaccgc
tccatccagtggcgcgaacaggtcattgagcccttgtatgacagccgcaatgaccacatg
atcatgtatcaactggccgagaagctgggctatgcagccgagctgaccaagaacctgacc
atggtcaagggcaagggcggcatgatgcaacccgagatcgagtccattctgcgtgaaatc
aacaaaggcacctggacaatcggttacaccggccaaagcccggaacgcttgaagctgcac
atgaaaaacatgcacaccttcaacgttcgcaccttgaaagcagaaggcggaccttgcgat
ggtgagtatttcggtttgccatggccatgctacggcactcccgaaatgaagcatcctggc
tcgccaaacctgtaccagaccgacaaacacgtgatggacggtggcgggaacttccgcgcc
aacttcggtgtggaaaaagacggtgtcagcctgttggctgaagacggatcacactcactg
ggtgctgaaattacaaccggctaccccgagttcacagccgacatgctcaagcagctgggc
tggtgggacgatttgaccgaagccgagaaaaccgaagccgaaggcaagaactggaaaacc
gacctgtcaggtggtatccagcgcgtcgtcatgaagcacggttgccatccgttcggcaac
gccaaggcccgtgccgtggtttggaacttccctgatccaatacccaagcaccgcgaaccg
ctgtactcgaccaagcccgatttggtggccaaatacccaacgcatgacgacaaggctgct
ttctggcgcctgccaaccctgtacaaatcagttcaggaaaagaatgccgacattggcaaa
tccttccccttgatcatgacgtcaggtcgtttggtggaatacgaaggtggtggtgaagaa
acacgttcaaatccgtggcttgccgagcttcaacaaaccatgtttgttgaactgagccca
cgggctgcgaatgaccgtggaatcaaacacggtgaccaggtgcgtgtgaccacgccaaca
ggcgcaaaaatcgaggtacaagccttggtgacccgccgcgtcggtgacgacaccgtgttc
ttgcctttccacttctcgggacactgggaaggaaaggacatgatcagcagctaccccgaa
ggctccgcaccgattgtgcgtggcgaatcggtcaacaccgcaaccacctatggttacgac
gtggtgacgatgatgcaggaaacaaaaacaaccgtgtgccaaatcgagaagttggcataa
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