Limnobacter thiooxidans: RGQ30_16010
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Entry
RGQ30_16010 CDS
T09704
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lto03029
]
RGQ30_16010 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lto02000
]
RGQ30_16010 (bamA)
Mitochondrial biogenesis [BR:
lto03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
RGQ30_16010 (bamA)
Transporters [BR:
lto02000
]
Other transporters
Pores ion channels [TC:
1
]
RGQ30_16010 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
BET26100
UniProt:
A0AA86J7T2
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All DBs
Position
complement(1753450..1755756)
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AA seq
768 aa
AA seq
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MTIRSTLFPARLVYPVVAVCALSVSVVHAQANQFVVKDIEVEGLRRTEAGTVFSYLPIRV
GDTFTDEKALQAIRSLFATGFFEDVKISAKGDVLVVTVVERPAIASVEINGTKEFDKDTL
KEALKGVGIGESLIFDRSLLDKAEQELKRQYLSRSKYGAQVQTRVDQLARNRVGITFNVD
EGESASIKQLKIIGSKEFTEKQLLEEFELSTGGLMSWYSKNDQYSRQKLSGDVEKLRSFY
LNRGYADFSIENTQVQIAPNKQDIFITITIKEGQKFTFGDVELSGQLLGRDAELRGLMQA
KKGETFNGEALTDTTKSIQDRLGNYGYAFANANVIPELDREKRVVNINIAVDPGKRVYVR
RMNVGGNTRTKDEVVRREFRQFESSWYDSRKIQLSKERVDRLGYFSNVDIETQPVPGTSD
QIDVNMQVEEKPTGNLLLGAGISSTDSLVLSAAIQQQNLFGTGKTVGLELNTSKVNRTIS
FSQTDPYFTIDGVSRSFEVYNRRTDPSSLNLGDYIIETTGAGMRFGYPISEFERISFGAG
YEGTDLEVGQFSPARFQRYVNDFGNSSYAVLLNAGYSYDSRDSAIAPTRGRVTRLTAEYA
TPLGDQEFIRTTYQEQFYFPIGKLYTLALNGEVTGGFGLGNSPYPIFRNVYAGGIGTVRG
YRASTLGDRDADNVPIGGSKRLIGNAEFFFPIPGMTKDRTFRAFTFLDAGNVFQSNEKIS
FGDLRYSTGVGISWLSPVGPLKFSLGIPLNSESQDETQRVQFTIGTGF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgacaataagaagtactctgtttcccgcgagattggtatacccagtcgtggcagtctgc
gcattgtccgtgagcgtggtccatgcccaagccaaccagtttgtggtaaaggacatcgag
gttgaaggtctacgccggacagaagcaggaactgtgttcagttacctgccaattcgtgtt
ggtgacactttcacggatgagaaggcacttcaggctattcggtccctgtttgccactggt
ttttttgaagatgtcaaaatttcagccaaaggcgatgttttggtggtcaccgttgttgaa
cgaccagccatcgcctccgtggaaattaacggtactaaagaatttgacaaagacaccttg
aaagaagcactgaaaggcgtgggtatcggtgaatcactgatattcgaccgctccttgctg
gacaaggcagagcaggaattgaagcgccagtacctgtcccgtagcaaatacggtgcgcag
gttcaaacacgtgttgatcaactggctcgcaaccgcgtaggcatcacattcaatgtggat
gaaggtgaatcggcttcaatcaaacagttgaaaatcatcggaagcaaagagtttaccgag
aagcaactgcttgaagaatttgagttgagtaccggtggcttgatgtcttggtatagcaaa
aacgatcaatattcccgccaaaagctaagtggtgacgttgaaaagctgcgctcgttttac
ctgaatcgtggttatgcagattttagtattgaaaatacacaggttcagattgcgccgaac
aagcaggatattttcatcaccatcaccatcaaagaaggtcagaaatttacctttggtgat
gtggagctaagtggccagctacttggacgtgacgcagagcttcgtggcttgatgcaggct
aaaaagggtgaaaccttcaatggtgaagcgttgacggacaccaccaagtccattcaggac
cgtttgggtaactacggctatgcttttgccaatgcaaacgtcattccagagctggatcgt
gagaaacgggtggtgaatatcaacatcgccgttgacccgggcaagcgtgtttatgttcgc
cgtatgaatgtgggtggcaacactcgcaccaaggacgaggtggttcgtcgcgaattccgc
cagtttgaatcttcttggtacgattctcgcaagattcagttgtccaaagaacgagtggac
cgtcttggttatttctcgaatgtcgacattgaaactcaacctgtccccggtacgtctgat
caaattgacgtgaacatgcaggtcgaggaaaagccaacaggcaacttgttgctgggtgct
ggtatatccagtactgacagcctggttctgtccgctgcaattcagcagcaaaacctgttt
ggtacgggtaaaacagttggccttgagctcaataccagcaaggtcaatcgaaccatttcg
ttttcccagacagatccttacttcacaattgacggcgtatcccgcagctttgaagtgtat
aaccgtcggactgaccctagttcactgaatctcggcgactacatcattgaaaccacgggc
gccggcatgcgctttggatatcctatcagcgaattcgagcgcatttcatttggtgcgggc
tatgaaggtaccgatctggaagtcgggcagtttagtcccgcacgattccaacgttatgtg
aatgatttcgggaactccagttatgccgtgcttttgaatgcgggctattcatatgactcc
cgtgattcagcaattgccccaacccggggccgcgttactcgcctgacagccgagtatgca
acgccgttgggcgatcaggaattcattcgaaccacctaccaggaacagttttacttcccg
attggcaagctttacacacttgctttgaacggtgaagtgaccggtggcttcgggctgggc
aattcaccctacccaatcttccgcaatgtgtacgcgggaggtattggcacggtgaggggc
tatcgcgcgtcaacacttggtgatcgtgatgcggacaacgtacctattggtggttcaaag
cgcttgatcggcaatgcggaattcttcttcccaattcccggcatgacgaaagatcgtacg
ttcagggcattcacattccttgacgcgggcaatgtgttccagagcaacgaaaaaatcagt
tttggtgatttgcggtattcaactggtgtaggtatttcctggttgtcgccagtggggcca
ttgaagttcagtttgggcataccactgaatagtgagtctcaggatgaaacgcaacgtgtt
cagttcacgattggcaccggtttctaa
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