Limnobacter thiooxidans: RGQ30_16170
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Entry
RGQ30_16170 CDS
T09704
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lto03036
]
RGQ30_16170 (smc)
Chromosome and associated proteins [BR:
lto03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RGQ30_16170 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
SMC_hinge
AAA_29
Put_DNA-bind_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BET26116
UniProt:
A0AA86J1Z1
LinkDB
All DBs
Position
complement(1771670..1775128)
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AA seq
1152 aa
AA seq
DB search
MPSNLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGESMQDVIFNGSTNRKAASRASVE
LVFDNAEGRAGGSWNQYAEISVKRVLTRDGASTYYINQQAVRRRDVQDIFLGTGLGPRAY
AIIGQGMIARIIEARPEELRIFLEEAAGVSKYKERRRETGNRLADTRDNLTRIEDILREL
TSQIERLEQQAKVARQFKELEEAKNTKQRLLWYIRYAESLEQKNTGQAKLERAKAELEAI
QSKSVSTQTELFSIREKQVDAQQQLENDQSQWIEANRQVSRLEADLRVMAESRTRLAARV
AELELEIQNWTLREEDAKARLDEISGSSEEQQAELEERFIALEEAELAVEPVEQALQAAR
FAVDQKRAGVMKIQQELSQVSSQQEAASRAENTIQVKLDRLDAERKQIAAPSIHELDQLV
SRVQSLETELIEATSTQTELEGKLTSSGLELEQVQLVFNSERDKHANAQAQLHALEKLNE
QLAESAELKPWIASTGLGETPRLLGKLQVERGWERALESALRESLDSFQVRTLDIVEGFA
RQPPPARVAFLESATPAAAIPVGPDDLASLVRSSDSSIQQSIVQLLSGYLLAPDLPTALA
KRKSLKPGQRIFTPQGHCVSASGVSFYAADNAQSGRLERQQQIDALRTEVRALEMLKNES
MTKRDQLQLRTGELKANAVQARALVESLTKRQHEAQVQLIRLQEQQSRADSRREQIGLDL
ALLESELEEQRAILLESEDKYAALDEQLAVSSDALEAQKDRVTEAEQLLRDKQAQVQNAM
RKKQDIEFAIRNQESRQRECERDIAFANTQIQQILQRKQLAVNELDGLSEVEGQEALQAA
LEDRVIAEEKVAVSRDALEQIMSKVSELERAEKESDKLADPLRDVVQDLALKIQAAELTI
EQYKNLLDEVQADVDDLGRQLLAMDIPPKASVLQAEVTRLTNAMQELGAVNLAALEELAA
ASERKSFLDMQAGDLMEAMETLEDAIRKIDKETRELLSETFGVVNGHFSRLFPKLFGGGE
ARLVMTGDEILDAGVQVFAQPPGKKNGTIHLLSGGEKALTATALVFAIFELNPAPFCLLD
EVDAPLDDANTERFTRLVKQMSEQTQFLFISHNKIAMEMAQQLIGVTMQEKGVSRIVAVD
LAAAEKMATETV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcaatctggttggcgtggtgggtccgaatggctgtggaaaatcaaacatcatt
gatgccgtgcgctgggtcttgggcgaatccaaggcctcggaattgcgcggtgaatccatg
caggacgtgatcttcaatggctcgaccaaccgaaaagccgcttcgcgtgccagtgtggaa
ctggtattcgacaatgcggaggggcgcgcaggtggcagctggaatcagtacgccgaaatt
tccgtcaagcgcgtgttgacccgcgacggagcgtccacctattacatcaaccagcaggca
gttcgtcgccgcgacgttcaggatattttcctgggtaccggcttgggaccacgcgcctac
gcgattatcgggcaaggcatgatcgcccgaattattgaagcccgcccggaagaattgcgc
attttcctagaagaagctgctggcgtatcaaagtacaaggaacgccgccgtgaaactggt
aaccgcttggccgacacacgcgacaacctgacccgtattgaagatatcctccgcgaattg
accagccagatcgaacggttggagcaacaggcgaaggtcgcccgtcaattcaaggaactt
gaagaagccaaaaataccaagcagcgcctgctgtggtacatccgctatgctgaatcgctg
gaacagaaaaacaccggtcaggccaaacttgagcgggccaaggccgagctcgaagccatt
caaagcaagtcggtgagcacccagaccgagcttttctcgattcgggaaaagcaggtggac
gcccagcagcagcttgaaaatgatcaaagtcagtggattgaagccaaccgccaggttagt
cggcttgaagcggatttgcgcgtgatggctgaatccagaacgcgattggcggcccgtgtc
gccgaactcgagctggaaattcaaaactggactttgcgcgaagaggacgccaaggcgcgc
cttgatgaaatcagcggatccagcgaggagcagcaggccgagcttgaagagcggtttatc
gcactggaggaagctgaactggccgtggagcctgtggagcaggccctccaggcagcccgg
tttgccgtggatcagaaacgtgccggcgtgatgaagattcagcaggaattgagccaggtt
tcatctcagcaagaggctgcaagccgagccgagaacaccattcaggtcaagcttgatcgt
ctggatgcagagcgcaagcaaatcgcggccccttcaattcatgaattggatcagctggtt
tctcgggtgcagtcactggaaaccgagttgatagaggccacgtctacccagacggagttg
gagggcaagctgacgtcaagcggcctagaacttgaacaagtgcagcttgtatttaacagt
gaacgtgacaagcacgccaacgcgcaagcgcaattgcatgcgcttgaaaagctgaatgaa
caactggcagaaagtgcagaactgaagccctggatagccagcactggccttggggaaacg
ccccgcctgctgggaaagttgcaggtggagcggggttgggaacgagcgcttgaatctgca
ttgcgtgaatcactggacagtttccaggttcgaacactggacatcgtggaaggctttgcc
agacagcctccccctgcgcgagtggcttttctggagtcggcgacaccagctgcagctatt
cctgtagggccagatgatttggccagcctggtacggagctcagattcttccatacagcaa
tccattgttcagcttttgtcgggttatcttttggcgcccgatttgcccacagcgcttgcc
aaacgcaaaagcctgaagccggggcagcgtattttcactcctcaaggccattgcgtcagc
gcctccggcgtgtccttttatgctgcggacaacgcccaaagtggaaggcttgagaggcag
cagcagattgacgcattgagaaccgaagtacgcgcattggaaatgctgaagaacgagtcc
atgaccaaacgcgatcagctccagttgcgaaccggcgaactgaaggccaatgcggtgcaa
gcacgtgccttggtggaaagtttgaccaaacggcagcatgaggctcaggtacagttgatt
cgtctgcaagaacagcagagcagggcagacagtcgtcgggaacaaatcggactggacttg
gccttgttggaaagcgaactcgaagagcagcgtgcaattcttttggagtcggaagacaaa
tacgctgcacttgacgagcagcttgctgtgtccagcgatgcgctggaagcacagaaagac
cgcgtgaccgaggcggaacaattgcttcgcgacaagcaggcccaggttcaaaatgcgatg
cgaaagaaacaggacattgagttcgcgatccgcaaccaggaatcaaggcaacgagaatgc
gagcgggacattgcttttgccaacacgcagatacagcagattctgcaacgcaagcagctt
gccgtgaatgagctggatggcttgtctgaagttgaagggcaggaagccctgcaagcggcc
ctcgaagatcgggtaatcgcagaggaaaaagttgctgtgtcacgagatgcactagagcag
atcatgagcaaggtttccgagcttgagcgtgccgagaaggaaagcgacaagctggcagat
ccacttcgggatgttgtccaggatcttgcattgaaaattcaggctgctgaactgactatc
gagcagtataaaaacctgctggacgaagtgcaggccgatgtagatgacttgggacgccaa
ttgttggcgatggatattccacccaaggcttcggttttgcaagcagaggttacccgcctc
accaatgccatgcaggagctgggagcggttaaccttgcggcgcttgaagaactggcggct
gcctcagaaaggaagtcttttctcgacatgcaggccggcgaccttatggaagccatggaa
acccttgaggacgcgattcgcaagatcgacaaggaaacccgggaattgctctcggaaact
tttggtgtggtcaacggtcacttttcacgactgttccccaaattgtttggtggcggggaa
gcgcgattggtcatgaccggggacgaaatcctggatgccggtgttcaggtttttgctcag
ccccctggcaagaaaaacggcaccattcaccttttgtcgggtggtgaaaaagcgctcacc
gccacagccctggtttttgcaatattcgaattgaatccagcaccgttctgcttgcttgac
gaagtagatgcgccgctggatgacgcaaacaccgagcgctttacgcgtttggtcaaacaa
atgtctgaacaaacccagtttttgttcatttctcacaataaaatcgccatggaaatggcg
cagcagttgattggcgtcacgatgcaggaaaaaggtgtgtctcgcattgtggctgtggac
ttggctgctgctgaaaaaatggcaacggaaaccgtatga
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