Limnobacter thiooxidans: RGQ30_16230
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Entry
RGQ30_16230 CDS
T09704
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lto03012
]
RGQ30_16230
Translation factors [BR:
lto03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
RGQ30_16230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
SMC_N
AAA_21
MMR_HSR1
RsgA_GTPase
MeaB
AAA_29
TsaE
DUF3597
Lumazine_bd_2
MobB
NACHT
NPHP3_N
V-SNARE
Med15_M
Dna2
Dynamin_N
AAA_15
DUF4391
Motif
Other DBs
NCBI-ProteinID:
BET26122
UniProt:
A0AA86JKE2
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All DBs
Position
1779143..1781059
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AA seq
638 aa
AA seq
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MIQINNLSIARGSKPILTNSELTLFPGEKVGLIGHNGAGKSSFLSALLGELPIDQGSIDL
PKVWRLSWIDQEVTANHLTVIDFALEGDRALHDIRQKIHAVEESGDMEQLGHLYEELENL
DGYTAEARVATILHGLGFKTEDLQRKVGEFSGGWKMRLNLAKVLGSRADLILLDEPTNHL
DIEAVVWLEQWIKQVNSTVILVSHDRDFLDEVCTHTVHLNNEKLTKYTGGYSAFERAFAE
RADQVSQANKKAAGEMEKLQKFVDRFKAKASKAKQAQSRVKRLEKIKLIETLQVEPHVSI
PFMEPHKSPDPLVVLNRSDCGYANAAPILKSISLELRPGDRIGLLGANGNGKTTLVKTLV
GELNMLGGDRVEGKGLVYGYFAQDQIESLDMNATPLQHMSRLERQMSEQKAREFLARYHF
RDDKVRQLVGSFSGGEKSRLALALLAYKRPNLLLLDEPTNHLDIATRQALASSLLEFEGA
LVMVSHDRHLLESITDRFWRVHQGAVTEFDGDLDDYAELLRKETSAENQKNKQNGGKAAP
AKVEQAAPPVDRQQVSQRLKQLNNQVKKLEKQIEVDRPKLIGLDASLAGCDYSNPDSAKK
AASQHEERNAIAARLELAENELLNAMVEIESLEEALGV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaatcaacaacctcagcattgcaaggggcagcaagcccattttgaccaattcg
gaactgaccctctttcccggggaaaaggtcggtctgattggccacaacggcgccggcaaa
tcaagcttcctcagtgcacttctgggcgaactgcccatcgaccagggcagcattgacttg
cccaaagtttggcgactgtcctggattgatcaggaagttaccgccaaccacctcaccgtg
attgattttgcgcttgaaggtgacagggccttgcacgacatccgccagaaaattcacgcc
gtggaagaaagcggtgacatggagcagctgggtcacctgtacgaagaacttgaaaatctg
gatggctacaccgcagaagcccgtgtggccaccattctgcatggtttgggttttaaaact
gaagatttgcaacgcaaggtaggcgagttttccggcggctggaagatgcgcctgaacctg
gccaaggtactaggttctcgtgctgaccttattctgctggacgaaccgaccaaccacctg
gacattgaagcagtggtttggcttgaacaatggatcaaacaggtcaacagcacggtgatt
ctggtttcacacgaccgcgattttctcgacgaagtgtgcacccacaccgtacatttgaac
aatgaaaaactgaccaagtacaccggtggatattctgcgtttgagcgcgcattcgccgaa
cgggccgaccaggtcagccaagccaataaaaaggctgctggcgaaatggaaaagctgcaa
aagtttgtggatcgtttcaaggccaaggcgagcaaagccaagcaggcacaaagccgggtc
aagcgcttggaaaaaatcaaattgattgaaacactgcaggtcgaaccgcatgtgtccatt
ccgttcatggagccccacaaaagccccgaccccttggtggttctaaaccgcagcgactgc
ggctatgcaaacgcggcgcccatcctgaaaagcatcagccttgaacttcgaccaggcgac
cgaattggcctgttgggtgcgaacggcaacggcaaaaccactctggtgaaaacactggtt
ggcgaactgaacatgctgggtggtgaccgggttgaaggcaaaggtcttgtgtacgggtac
ttcgcgcaagaccaaatcgaatcgctggacatgaatgccacgccactgcagcacatgtcc
cggcttgaacggcagatgtcggaacagaaggcacgcgaattcctggcccgctaccatttc
cgcgacgacaaggtgcgccagttggtaggcagtttttcgggcggagaaaaatcacgcctg
gcgcttgcgctactggcctacaagcgccctaacctgctcttgctggacgaacccaccaat
cacttggacatcgccacacgccaggccttggccagcagtttgctggagtttgaaggtgct
ttggttatggtttcccacgacaggcacttgctggaatccatcacggaccgtttctggcgt
gtgcatcagggtgcagtcacggaatttgatggtgatctggacgattacgcagaactgctg
cgtaaggaaaccagcgcagaaaaccagaaaaacaaacagaatggtggcaaggcagcgccc
gccaaagtggagcaagcagccccaccagtggatcgccaacaggtcagccaacgcttgaag
caactgaacaaccaggtaaaaaagctcgagaaacaaattgaggtcgatcgacctaaactg
atcgggctggatgcctcgctggctggctgtgattacagcaaccccgattctgcaaaaaaa
gccgcgtcgcaacatgaagaacgcaacgcaattgcagcccgccttgagctggcggaaaac
gagttgctgaatgcaatggtcgagatcgaatcgctggaagaagcattgggagtctaa
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