Limnobacter thiooxidans: RGQ30_16820
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Entry
RGQ30_16820 CDS
T09704
Name
(GenBank) arginine/lysine/ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00330
Arginine and proline metabolism
lto01100
Metabolic pathways
lto01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RGQ30_16820
Enzymes [BR:
lto01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
RGQ30_16820
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
DUF4350
Motif
Other DBs
NCBI-ProteinID:
BET26181
UniProt:
A0AA86JFS4
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All DBs
Position
complement(1849331..1851586)
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AA seq
751 aa
AA seq
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MKFRFPIVIIDEDFRSENASGLGIRALADAIEKEGVEVLGVTSYHDLSQFAQQQSRASAF
ILSIDDEEFGLGSKKEIEDALQNLNNFVQEIRFKNADIPIYLYGETRTSRHIPNAILKEL
HGFIHMFEDTPEFVARHIIREAKSYLDSLAPPFFRALVHYAQDGSYSWHCPGHSGGVAFL
KSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFNADHCFFVTNG
TSTSNKMVWHANVAPGDIVVVDRNCHKSILHSITMTGAIPVFLTPTRNHLGIIGPIPLEE
FQPESIARKIANHPFASKAKNKKPRILTITQSTYDGVLYNVEMIKEVLGSEIDTLHFDEA
WLPHASFHPMYKDMHAIGKDRPRTKDSLVFATQSTHKMLAGLSQASQILVQESENRKLDR
HIFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIIEALDFRRAMRKVDEEF
GDDWWFKVWGPDVLSEEGMSPRDDWLIHTTDTWHGFGKMANGFNMLDPIKATIVNPGLDV
NGQFSDAGIPASIVTKYLAEHGVIVEKTGLYSFFIMFTIGITKGRWNTLVTALQQFKDDY
DKNQPLWRVIPEFCQAHPRYERVGLRDLCNTIHDMYRKSDVARLTTEMYLSDMQPAMVPA
DAYAKVAHREIERVAIDDLEGRITSALLTPYPPGIPLLIPGEIFNSTIMDYLKFARDFNK
QFPGFETDIHGLVEIEDENGNVSYFVDCVKV
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgttttcccattgtcatcattgacgaagatttccgctccgagaatgcatct
ggtctcggcattcgcgccttggctgacgcaatcgaaaaagagggcgttgaagtactggga
gtgacgagttatcacgatctttcccagtttgcccaacagcaaagccgcgcaagcgctttc
atattgtcgattgacgatgaagaattcggcttgggtagcaaaaaggaaattgaagacgca
ctgcaaaacctgaataatttcgttcaggaaatccgcttcaagaacgcagacattccaatt
tatttgtacggtgaaacccgcacatcgcgacacattcccaatgccattctgaaagagttg
catggctttattcacatgttcgaggacacaccggaattcgtggcccgtcacatcattcgt
gaagccaaaagctacctggactcactggcgcccccgtttttccgcgcgcttgtacattac
gcgcaagatggttcctactcttggcactgccctggccattccggcggcgtagcgtttttg
aaaagccctgtgggccagatgtttcaccagttttttggcgagaacatgttgcgcgctgac
gtttgcaacgcggtagatgaactaggccagttgcttgaccacacagggcctgtggctgcc
tctgaacgcaatgctgcccgcattttcaatgctgaccattgcttcttcgtgaccaatggc
acgtccacttccaacaagatggtgtggcacgccaacgtggcgccaggcgacattgtggtg
gttgaccgcaactgccacaaatcgattttgcattccatcacaatgacaggcgccattccg
gtttttctgaccccaactcgcaaccatttgggcattattggtcccattccgcttgaagag
tttcagccagaaagcattgcccgtaaaattgcaaaccacccgtttgccagcaaggccaag
aacaagaagccccgtattttgacgattacgcaaagcacctatgacggtgtgctgtacaac
gtggaaatgatcaaggaagtgctaggttctgaaattgacactttgcactttgacgaagcc
tggctgccacacgccagcttccaccccatgtacaaagacatgcatgcgattggaaaagac
cgcccgcgcaccaaggattccttggtgtttgccacgcagtccactcacaagatgctggct
ggcttgtcgcaggcctcgcaaattcttgtgcaggaatccgagaaccgtaagctggaccgc
catattttcaacgaagcctatttgatgcacacctcgaccagcccgcaatacgccattatt
gccagctgtgacgtggctgcagccatgatggagccacccggtggcaccgctttggttgaa
gaaagcatcattgaagcactggatttccgccgcgccatgcgcaaggtggatgaagagttc
ggtgacgactggtggttcaaggtgtggggccctgacgtgttgagcgaagagggaatgagc
ccgcgcgatgactggctcattcacaccactgacacctggcacggctttggcaaaatggcc
aacggcttcaacatgctcgaccccatcaaggccaccattgtgaacccggggctggatgtg
aacggtcagttttccgatgcgggcattccagcttcgatcgtgaccaagtaccttgccgag
catggtgtgatcgtggagaaaacaggtctgtattccttcttcatcatgttcaccattggc
attaccaaaggccgctggaacacgctggtgactgcactgcagcagttcaaggatgattac
gacaagaaccaacccttgtggcgcgtgattcccgagttttgtcaggcccatccccgctat
gaacgcgtgggcttgcgcgacctgtgcaacaccattcacgacatgtaccgcaagagtgat
gtggcacgcttgaccactgaaatgtatttgagcgacatgcaacccgccatggtgccggca
gatgcctacgccaaagtggctcaccgtgaaatcgagcgtgtcgcaattgacgacctggaa
ggccgcattacgtctgcgttgttgacaccttatccaccaggtattcctttgttgattccg
ggtgaaatattcaacagcaccatcatggactatttgaagtttgctcgggatttcaacaag
caattcccaggtttcgaaaccgacattcatggtttggtcgagatcgaagacgagaatggc
aacgttagctacttcgtggattgcgtgaaggtataa
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