Limnobacter thiooxidans: RGQ30_17160
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Entry
RGQ30_17160 CDS
T09704
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lto03000
]
RGQ30_17160
Transcription factors [BR:
lto03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RGQ30_17160
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_20
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
BET26215
UniProt:
A0AA86MEP9
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Position
complement(1881800..1882708)
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AA seq
302 aa
AA seq
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MNLTLRQLHLFTALARLKSLTAVARHFHVTQPTVSMQMKELSESVGLPLYEVIGKAIFLT
PAGIELEATARAMLNELEGFQQRIDDIKGFRRGKLTVAVVSTAEYFVPGLLGDFCARYPE
VDIALEVLNRNGVVQRLEHNLDDLYIMSKPPANLDVEAKAFMTNSLQVVAPLGHPLAQRK
RIKHTELTRYPFILRERGSGTRLACDSHFEQLGFEPVVRLELGSNEAIKQAVQAGMGLAV
LSEHALNAGSATQDLTTLNVQSFPIHANWYTVRPNGKRPSPVAADFWRYLNVELKKGRSQ
KN
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgacccttcggcagttgcacctgttcaccgcgcttgcccgcctgaaaagcctc
accgcggtggcgcggcattttcatgtcacgcagcccacggtgtccatgcagatgaaagag
ctgtctgagtccgtgggtttgcctttgtacgaagtcattggcaaagccatctttctgacg
cctgcaggtattgaactggaagccacagcgagggccatgctcaacgagctggaaggtttt
cagcagcgtattgacgacatcaagggttttcggcgcggcaagttgaccgtggccgtggtc
agtacggcagagtattttgtgccgggcttgcttggtgacttttgtgccaggtatcccgag
gtggacattgcacttgaagtattgaatcgcaacggtgtcgttcaacggctggaacacaac
ctcgacgacctgtacatcatgtccaaacccccggccaacctggacgtggaagccaaagcc
ttcatgaccaattcattgcaggtggttgcccccttgggtcatcctttggcgcagcgcaaa
cggatcaagcacaccgagttgacccgctatcccttcattctgcgggaacggggttcaggc
actcgcctggcgtgcgattctcatttcgaacaactcggcttcgaaccggttgtcaggctt
gaactgggcagtaatgaggcaatcaagcaggcagtacaggcgggtatgggcctggcggtg
ttgtcggagcacgctctgaatgcggggtcggcaacccaggatttgacgaccttgaatgtt
caaagcttcccgatacatgccaactggtacactgtgcggcccaatggcaaaaggccctcg
ccggtggcggccgacttctggcgctacctgaatgtcgagttgaaaaagggcaggtcacaa
aaaaattaa
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