KEGG   Limnobacter thiooxidans: RGQ30_17760
Entry
RGQ30_17760       CDS       T09704                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
lto  Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:lto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lto03016]
    RGQ30_17760
Enzymes [BR:lto01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     RGQ30_17760
Transfer RNA biogenesis [BR:lto03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    RGQ30_17760
 Prokaryotic type
    RGQ30_17760
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1 DctQ
Other DBs
NCBI-ProteinID: BET26275
UniProt: A0AA86MER5
LinkDB
Position
1948002..1949069
AA seq 355 aa
MFRKLLLASIALILLGGGIAYLQRTPIAMALVEKIVGERMQDPLARLEDGLHVGLCGTGS
PFPDPDRAAPCTLVIAGKDMFLFDAGSAAAKQISIMRFSTGQLKGVFITHFHSDHIDGLG
EVLMTRWAQHTEGQRLTVHGPNGISNVLQGFKQAYTADTGYRTAHHGAAIMPNELAGADV
NEFSVQKGQYTTVLQQPDLLIEAFAVNHQPISPAVGYRINYKGRTVVLSGDTTGDEQVKD
AARNADLLIHEALSPELVGKLQEAALNNKRSKLAKIFADIPNYHATPLDVAELAQEAGVG
HVVLSHIVPPLPLPPLREVFLGKAPEIFKGPFRIGEDGDFITLPAGSKDVIYSRR
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgttcagaaaactgctacttgcctccattgccttgatcttgctgggcggcggcattgcc
tacctgcaacgcaccccgattgccatggcactggttgaaaaaattgtgggcgagcgcatg
caagacccgctggcgcgactggaagatgggcttcacgtaggtctgtgcggaacaggctcg
ccgtttcctgaccccgaccgcgctgcaccgtgtaccttggtgattgctggcaaggacatg
tttttgttcgacgcaggcagcgccgccgccaagcagatcagcatcatgcgtttttccacc
gggcagttgaaaggcgttttcatcacccactttcattccgaccacatcgacgggctgggc
gaagtattgatgacccgctgggcacaacacaccgaagggcaacgccttaccgtgcatggc
cccaacggcatttcaaatgttctgcaaggcttcaagcaggcctacacggccgacaccggt
taccgaacagcccaccatggcgcagccatcatgcccaatgaactggctggggcagatgtc
aatgaattttcagtgcaaaaaggccagtacaccaccgtgttgcagcaaccagaccttctg
attgaagctttcgcagtaaatcaccagcccatcagcccggccgtgggctatcgaatcaat
tacaaaggccgcaccgtggtactcagtggtgataccaccggtgatgaacaggtgaaagac
gcagcacgcaatgcggaccttttgattcatgaagccttgagcccggaattggtaggcaag
ttgcaggaagccgccttgaacaacaagcgcagcaagctggccaagatttttgcggacatc
ccgaactaccatgctaccccgctcgacgtggctgaactggcccaggaagccggtgtgggc
catgtggtgctcagccacattgtgcccccactgcccctgccacccttgcgggaagtcttt
cttggaaaggcgccagaaatttttaagggtccattccgcattggcgaagacggcgatttc
atcacccttccagccgggtcgaaagacgtcatttacagccgtcgataa

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