Limnobacter thiooxidans: RGQ30_17760
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Entry
RGQ30_17760 CDS
T09704
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lto03016
]
RGQ30_17760
Enzymes [BR:
lto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
RGQ30_17760
Transfer RNA biogenesis [BR:
lto03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
RGQ30_17760
Prokaryotic type
RGQ30_17760
BRITE hierarchy
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
DctQ
Motif
Other DBs
NCBI-ProteinID:
BET26275
UniProt:
A0AA86MER5
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Position
1948002..1949069
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AA seq
355 aa
AA seq
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MFRKLLLASIALILLGGGIAYLQRTPIAMALVEKIVGERMQDPLARLEDGLHVGLCGTGS
PFPDPDRAAPCTLVIAGKDMFLFDAGSAAAKQISIMRFSTGQLKGVFITHFHSDHIDGLG
EVLMTRWAQHTEGQRLTVHGPNGISNVLQGFKQAYTADTGYRTAHHGAAIMPNELAGADV
NEFSVQKGQYTTVLQQPDLLIEAFAVNHQPISPAVGYRINYKGRTVVLSGDTTGDEQVKD
AARNADLLIHEALSPELVGKLQEAALNNKRSKLAKIFADIPNYHATPLDVAELAQEAGVG
HVVLSHIVPPLPLPPLREVFLGKAPEIFKGPFRIGEDGDFITLPAGSKDVIYSRR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaaaactgctacttgcctccattgccttgatcttgctgggcggcggcattgcc
tacctgcaacgcaccccgattgccatggcactggttgaaaaaattgtgggcgagcgcatg
caagacccgctggcgcgactggaagatgggcttcacgtaggtctgtgcggaacaggctcg
ccgtttcctgaccccgaccgcgctgcaccgtgtaccttggtgattgctggcaaggacatg
tttttgttcgacgcaggcagcgccgccgccaagcagatcagcatcatgcgtttttccacc
gggcagttgaaaggcgttttcatcacccactttcattccgaccacatcgacgggctgggc
gaagtattgatgacccgctgggcacaacacaccgaagggcaacgccttaccgtgcatggc
cccaacggcatttcaaatgttctgcaaggcttcaagcaggcctacacggccgacaccggt
taccgaacagcccaccatggcgcagccatcatgcccaatgaactggctggggcagatgtc
aatgaattttcagtgcaaaaaggccagtacaccaccgtgttgcagcaaccagaccttctg
attgaagctttcgcagtaaatcaccagcccatcagcccggccgtgggctatcgaatcaat
tacaaaggccgcaccgtggtactcagtggtgataccaccggtgatgaacaggtgaaagac
gcagcacgcaatgcggaccttttgattcatgaagccttgagcccggaattggtaggcaag
ttgcaggaagccgccttgaacaacaagcgcagcaagctggccaagatttttgcggacatc
ccgaactaccatgctaccccgctcgacgtggctgaactggcccaggaagccggtgtgggc
catgtggtgctcagccacattgtgcccccactgcccctgccacccttgcgggaagtcttt
cttggaaaggcgccagaaatttttaagggtccattccgcattggcgaagacggcgatttc
atcacccttccagccgggtcgaaagacgtcatttacagccgtcgataa
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