Limnobacter thiooxidans: RGQ30_18100
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Entry
RGQ30_18100 CDS
T09704
Name
(GenBank) hypothetical protein
Organism
lto
Limnobacter thiooxidans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Peptidase_C14
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
EF-hand_5
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
BET26309
UniProt:
A0AA86M8N6
LinkDB
All DBs
Position
complement(1986853..1990551)
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AA seq
1232 aa
AA seq
DB search
MGLMSFAKCLWVPPFLLGSILTLSSYAFADTEQAEVFVQTGHTMSTTAVDYSPNGQRLVS
CDGSGSVIGWDAESGLQYRGLYRHLGLCLNAAFSRDGQRVYSTGGAKDGQQLVETDYSSG
SLRQVWTGHTGLIVGMLVKEDGVWTLGESDGLKFWQAGRSKAVRTVPLPAVQFGNASQLA
GTEHSSSLWVGNRLGQVLEVPESGKPRLLASLGEEVSSLAVSPDGARIAVGLGTFMGSKS
SAIVLLDAASGTVIRSLEGHSGSPVSIAFSPDGKTLGTLAQIDLQKLMTGSAGALAGQEE
LRLWSVETGQLLSTAINERNALGTPFIRAQLKFSRDGQSLAVAAWDEAVRLYALPSLSAE
LKTTRVLEGRGAPALQVALDGQGKNLAVSAGRPRNKKAAEYYEAAQLIQDFGGESNFTRE
QLARLSVLYGPKGFRKHRQTVSIWDLTDGQMKSTVNWQLGPTSWLSTSKGGSGFVSLAPL
FPNTVTVSPLKSRLIREASLLSSGETSFQHFSYERNQGEPDRVTDDMVQGGDESYAADLT
SQNREGTVTAVASTRLNSDPAQRDHRVHVLMKKSNTRQLPGEWALPGKAIAMAVSPDGKI
VWVSISVQGALYSDNHQGRAIAFDTQSGQLLGQWNLPKGVTAYQMAVHSVGRGAVFGGDS
RLLVAQIGRKALTQQVVWRGADRPVTALSVSADGNQLAVSNTAGQTARLDWSNVSLMKLK
WSGALSEPFPSLWAWSDDQKFLVAASDDGRVRILDPASGKTRLNLFQFDEQEWLSISNEG
YFAASPKGDEWINVRVNQQVYRIGQFYDVFYRPDIVQRGLQGLPIADLVSVTLEDAIKRP
PPRVNLSGTSEGDQSTAEIKLDLQNSGGGIGEVRLLLNGKLLARENTAIDQVVNQRAPTP
GMANLSTVKPDVAVAGSLRALKLASKKQVEKVRQANEVQQLAIETRVDLAPGENEIAVMA
LNAAGDLSSRPTRVSLFNPAKAKAPTLWLLSVGIDQFKANPQAPNLNFAVKDAQSFSREL
ALPLARAVKAARTETIELIDVQATRDGLQQALNRVAEQSSSEDVFVWFVASHGTLDDLAQ
YGMVLHDWNGSTSPGQLFSSDEILNAATRIKAARQLLILDTCHAGGLNGWLRGLFDARFS
VLARNSGLHLFASAGETQQALDGYQGNGLYTHVLLKSIQNPETDQNQDGQIDTSEWGAIA
KQETSRLARILRHQQEPMMMNFGKEIPVYEKP
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgatgagtttcgccaagtgcctgtgggtgcctccgtttcttctgggttcaatc
ctgaccttgagcagttacgcttttgctgacactgagcaggcagaggtatttgttcaaact
ggtcacaccatgtcaacaaccgccgtggattattcaccgaacggacaacgcttggtcagt
tgtgatggaagtggttcagtgattggttgggatgccgagagcggcctgcaatacaggggc
ttgtatcgtcacttgggtctttgcctgaatgcagccttttcacgtgatggccagcgagtg
tattccacagggggggcaaaggacgggcagcagctcgtggaaactgactattcaagcggt
tccttgcgacaggtgtggactggtcacaccgggttgattgtcggcatgttggtcaaggaa
gacggcgtgtggaccttgggcgaaagtgacggcttgaagttctggcaagcagggcgatca
aaagctgtacgtacagtgccccttccagctgtgcagtttggaaatgcgagtcagttggcg
ggaacagaacattcatccagtttgtgggttggtaatcgactggggcaagtgctcgaagtg
ccagaaagcggaaagcctcgtctgcttgcttctttgggtgaggaagtgtcaagccttgca
gtatcacccgatggtgcacgcatcgcggtgggcctgggaaccttcatggggagcaagagt
agcgccatcgtgttgcttgacgcagcatcggggacagtcattcgcagccttgaaggtcat
tctggcagccctgtgtcgattgctttttcgccagatggcaaaacattgggaacccttgct
caaatcgatttgcagaaactgatgactggcagtgcaggtgcattggcagggcaggaagag
ttaaggctgtggtctgttgaaacaggccaattgttgtcaactgcgatcaatgagcgcaac
gctttgggtacgccgttcatcagggcccagttgaagttttcgcgagatgggcagtcgttg
gctgttgcggcatgggatgaagctgtgcgcttgtatgccttgccttctctttcggcagaa
ttgaaaaccacgcgtgtccttgaggggcgcggtgcgccagcacttcaagtggcgcttgat
gggcagggcaagaatctggcagtttcagcgggccgcccccgcaataaaaaagccgctgaa
tactatgaggctgcccaactgattcaagattttggtggtgagtcgaatttcacccgcgaa
caattggctcgtctgtcggttttgtatggtcctaaaggatttcgcaaacatcgtcaaacc
gtgtccatctgggatttgactgatggacaaatgaaatccacagtgaattggcaactcggc
ccgacaagttggttgtccacgtcaaaaggtggctctggctttgtgtcccttgctcctctg
tttccgaatactgtaactgtgtcgccgctgaaaagcaggttgattcgtgaagccagtctt
ttgagcagcggtgagacaagttttcaacacttcagttatgaacgcaatcagggtgaacct
gaccgagtcaccgatgacatggtacagggcggtgatgaatcttacgccgctgatttaacg
agtcaaaatcgggagggaacggtgacagcagtggcatccacccgcttgaattctgaccct
gcgcagcgcgatcaccgtgttcatgtgttgatgaaaaagtcgaacacccgacagctgcct
ggcgaatgggcattgcccggaaaggcgattgcaatggcagtaagcccggatgggaagatc
gtgtgggtgagcatcagcgttcaaggcgcattgtattcagacaaccaccaggggcgcgcc
attgcattcgatacccaatcaggccagttgttgggtcaatggaatttacccaaaggggtg
acggcgtatcaaatggcggtccattcggtggggcgtggcgcggtttttggtggcgacagt
cgattgcttgtcgcgcaaattggtcgaaaggcgttgacccaacaggtggtgtggcgcggg
gcagatcggcctgtcacggcactcagtgtgtcagccgatggcaatcaattggcggtatcg
aatacggccgggcagacggcacggctggattggtcaaacgtatccctgatgaaactcaaa
tggtccggcgcgttgagtgaaccatttccatcgttgtgggcgtggtctgacgatcagaaa
ttcctggtggcagccagcgatgatggccgtgttcgcatcctggatccagcaagtggaaag
acccgcctcaacctttttcaatttgatgagcaggagtggttgagtatttccaatgaggga
tattttgcagcctctcccaaaggggatgagtggatcaacgttcgtgtcaaccagcaggtc
tatcgaattggacagttttatgatgtgttctacagaccggacatcgtacagcggggtttg
cagggcttgccaattgctgatctggtaagtgttacgcttgaagacgcgatcaaacgacca
cctccccgagtgaatttgagtgggacgagcgagggtgatcaaagtacggctgagatcaaa
ctggatttgcaaaattcaggtggaggtatcggagaagttcgtctgttgttgaatggcaaa
ttgctagcgcgtgaaaacaccgccatcgatcaggtcgtcaatcaacgggcgccaactcca
ggcatggcaaatctttcaacggtcaaacctgatgtggccgtggccggttctctgcgtgcg
ctcaagttggccagcaaaaagcaggtcgagaaggtgcgtcaggccaatgaagtacaacaa
ctggcgatcgaaacacgcgttgacctggcgccgggagagaatgaaatagccgtgatggcg
ctgaacgctgcgggtgacttgagcagtcggccaactcgtgtttcactcttcaatccggca
aaagccaaggcacccacattgtggctactgtcggtggggattgaccagttcaaggccaat
ccgcaggcgccaaatcttaatttcgcagtcaaagatgctcagagtttttcgcgcgagttg
gctttgcctttggcccgggccgtgaaagctgcacgcacggaaacaattgagctgatcgat
gtgcaagccactcgagacggtttgcagcaggcgctgaatcgggtcgcagaacagtcaagt
tcagaagatgtgtttgtctggtttgttgcaagccatggcacgctcgatgacttggcccaa
tacggcatggtgcttcatgactggaatggcagcaccagtccaggccagttgttctcctcg
gatgaaatactcaacgctgctacccggatcaaggctgcccggcagttgctgattctggat
acttgccacgctggcggattgaatggatggcttcgtggtttgtttgatgcccgtttctcg
gtgttggcccgcaattcgggtctgcatctttttgcgtcagcaggcgagacccagcaagct
ttggacgggtatcagggcaacggtttgtatacccatgtgttgttgaaatcaatccagaac
ccggaaacagatcagaatcaggatggtcagattgacacttcggagtggggtgccattgca
aagcaggaaacatcccgtcttgccagaatcttgcggcaccagcaggaaccaatgatgatg
aattttggaaaggaaatccctgtttatgaaaaaccctaa
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