Limnobacter thiooxidans: RGQ30_18380
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Entry
RGQ30_18380 CDS
T09704
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lto03400
]
RGQ30_18380 (radA)
DNA repair and recombination proteins [BR:
lto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RGQ30_18380 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
DnaB_C
Lon_C
AAA_22
GvpD_P-loop
AAA_16
AAA_24
RecA_N
TniB
AAA_14
nSTAND_NTPase5
AAA
ABC_tran
NACHT
MCM
nSTAND3
ATPgrasp_N
DUF7129
AAA_5
GvpD_bR2
Zn_ribbon_8
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
BET26337
UniProt:
A0AA86MIJ5
LinkDB
All DBs
Position
complement(2028820..2030202)
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AA seq
460 aa
AA seq
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MAKSKSQYQCTECGSVFPKWQGQCTDCNSWNTLVESAVTATAPPKPSRFAALAAQSNTVI
KLADIQAQDHPRFSSGVPEFDRVLGGGMVPGMVVLLGGDPGIGKSTLLLQSMVTLAKTTS
ALYVSGEESAGQIALRAQRLGLEHANLSVLTEIQLEQIVAQLEILKPQVLVIDSIQTLYT
SELSAAPGSVSQVRECASQLTRLAKALGITTILVGHVTKEGTLAGPRVLEHIVDTVLYFE
GDSQSSFRLVRAFKNRFGAVNELGVFAMTDRGLKGVNNPSALFLSQQAEWVAGSCVMCTQ
EGARPLLVEIQALVDASHSPAPRRLSVGLEQNRLAMLLAVMHRHAGLQFFDQDIFINAVG
GVRISEPAADLAIVLAMVSSLRNKRLPKELVVFGEIGLSGELRPAPRGQERLREAAKLGF
THAIVPASNAPKQPIDGIEVIGVDRVEKALAALRDKLDCF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaaagtaaaagtcaatatcaatgcaccgagtgtggttccgtattccccaaatgg
caggggcaatgtaccgattgcaacagctggaacacactggttgaatcggctgtaacggcc
actgcaccacctaagcccagccggtttgctgcacttgccgcgcaaagcaacaccgtcatc
aagcttgctgatattcaggctcaggaccacccgcgattcagtagcggtgtgccggagttt
gatcgcgtgttgggtgggggcatggtacccggcatggtggtgttgctgggtggcgatcct
ggtattggtaaatcaaccttgctgctgcagtccatggtcaccttggccaaaaccacctcg
gccctgtatgtcagcggtgaagagtctgcaggtcaaattgcattgcgcgcgcaacgattg
ggtctggagcacgccaacctcagtgtgttaacggaaatacaactggagcagatcgttgct
cagcttgaaatactgaaaccccaggtcctggtgatcgattcgatccagaccctttacacc
agtgaattaagcgcagccccaggttccgtcagtcaggttcgcgagtgtgcaagccagttg
acccgcctggccaaagccttgggaatcaccaccattctggtcggccatgtcaccaaagaa
ggtactttggctggcccccgtgttctcgaacacattgtggacaccgtcttgtattttgag
ggcgactcgcagtcgtctttccgcctggttcgagcattcaagaaccgttttggcgccgta
aatgaactgggtgtctttgccatgacagaccggggtttgaaaggggtcaacaatccgtcc
gccttgtttttgtctcaacaggctgaatgggttgcgggctcctgtgtcatgtgtacgcag
gaaggggcacgacctttgttggtcgaaattcaggccctggtcgacgcgtcccattcgcct
gcaccccggcgtttgtcagtggggcttgaacaaaaccgcctggccatgttgctggccgtg
atgcatcggcatgcgggtttgcagttctttgaccaggacattttcatcaatgcggtgggc
ggggttcgaatttcggaacctgcggctgacttggcgattgtgttggccatggtgtcctcc
ctgcggaacaagcgtttgcccaaagagctggtggtttttggtgaaattggcttgtcaggt
gagttgcgtcctgcaccccgcgggcaggaacgtttgagggaagcggccaagttgggtttt
acccatgccatcgttccggccagcaatgcacccaagcagcccatcgacggcattgaagtc
atcggtgtggatcgggttgagaaagcgcttgccgcactgagagacaagctggattgtttt
tga
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