Limnobacter thiooxidans: RGQ30_18720
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Entry
RGQ30_18720 CDS
T09704
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00020
Citrate cycle (TCA cycle)
lto00190
Oxidative phosphorylation
lto00650
Butanoate metabolism
lto00720
Other carbon fixation pathways
lto01100
Metabolic pathways
lto01110
Biosynthesis of secondary metabolites
lto01120
Microbial metabolism in diverse environments
lto01200
Carbon metabolism
Module
lto_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lto_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lto_M00149
Succinate dehydrogenase, prokaryotes
lto_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RGQ30_18720 (sdhA)
00650 Butanoate metabolism
RGQ30_18720 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RGQ30_18720 (sdhA)
00720 Other carbon fixation pathways
RGQ30_18720 (sdhA)
Enzymes [BR:
lto01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RGQ30_18720 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
FAD_binding_3
Thi4
NAD_binding_7
Lycopene_cycl
Pyr_redox_3
GMC_oxred_N
GIDA
Motif
Other DBs
NCBI-ProteinID:
BET26371
UniProt:
A0AA86J2A2
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All DBs
Position
complement(2070639..2072420)
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AA seq
593 aa
AA seq
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MTAVKTSLPRRKFDAVIVGAGGAGMRCSLQLAEAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSDDSWYWHMFDTVKGSDYLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANFGEKPVQRACAAADRTGHALLHTLYQRNVRARTQFFVEWMALDIIRDADG
DVVGVTALEMETGEMMVLEAKTTVFATGGAGRIWDASTNAFINTGDGMGMAARAGIPLED
MEFWQFHPTGVAGAGVLVTEGVRGEGGILLNSEGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDYVLLKLDHLGADTIMKRLPSIREIAIKFANVDPIKEPIPVVPTIHYQ
MGGIPTNVYGQVVAPKVPGGASEIVNGMYAIGECACVSVHGANRLGTNSLLDLIVFGRAA
GNHIVNSNLKARNHKDLPADGTDLTMARVDKLMTSTSGENVRVVADAIRKGMQYHCGVFR
TTELMEAGVTKINDLAKQAEHIHLKDKSKVFNTALVEALELANLQETAKATMVSAAAREE
SRGAHAHRDFPERDDDKWMRHSLWYSEGNRLDYKPVNLKPLTVETFQPKKRTF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcagttaaaacttcccttccacgtcgcaagttcgacgcggtaatcgtaggtgcg
ggtggcgcgggtatgcgttgttcgctccagttggcagaggctggtctgaatgtagccgtg
ctgtccaaagtattcccgacccgttcacacacagtggccgcgcagggtggtattggtgcg
tccttgggaaacatgtccgatgacagctggtactggcacatgtttgacaccgtcaagggt
tcagactacctgggtgaccaggacgccatcgagttcatgtgtcgtgaagcccccaaggtg
gtttacgaacttgaacacttcggcatgccatttgaccgtaaccccgatggcaccatttac
cagcgcccattcggtggtcacacagccaacttcggtgaaaagcccgtacagcgtgcctgt
gccgcggctgaccgtacaggccacgccctgttgcacaccttgtatcagcgcaacgtgcgt
gcacgtacccagttcttcgtggaatggatggcattggatatcattcgcgacgccgatggc
gacgtggtgggtgtaacagcgcttgaaatggaaaccggcgaaatgatggttttggaagcc
aaaaccacggtattcgcaaccggcggcgcaggccgcatctgggacgcatccaccaacgcc
ttcattaatacaggcgacggtatgggtatggctgcgcgtgcaggcattcccctggaagac
atggagttctggcagttccaccccaccggcgtggccggtgcaggtgtactggttacagaa
ggtgttcgcggcgaaggcggtattttgctgaacagcgaaggcgagcgtttcatggaacgc
tatgcgccaaccctgaaagacttggctccacgtgacttcgtgtcccgttcaatggaccag
gaaatcaaggaaggccgtggctgtggccccaacaaagactacgtcttgttgaagctggac
cacctgggtgcagacaccatcatgaagcgtctgccttccattcgtgaaatcgcgatcaag
tttgccaacgtagacccgatcaaagagccaattcctgttgttccaaccattcactaccag
atgggcggtattccgaccaacgtgtatggccaggttgtagcaccaaaagtaccaggcggc
gccagcgaaatcgtcaacggcatgtacgccatcggcgaatgtgcatgcgtatccgtacac
ggcgcgaaccgtttgggcaccaactccctgctggacttgatcgtgtttggccgcgcagcg
ggcaaccacatcgtgaacagcaacctgaaagcacgcaaccacaaagacttgccagccgat
ggcacggatttgaccatggcgcgtgtggacaagctgatgacttccaccagtggtgaaaac
gttcgtgtagtggctgatgcaatccgcaagggcatgcagtaccactgtggcgtgttccgc
accaccgaattgatggaagctggcgtgaccaaaatcaatgatttggccaagcaagctgaa
cacattcacctgaaagacaagtccaaggtgttcaacaccgctttggttgaagcgctggaa
ctggccaacctgcaggaaactgccaaggccaccatggtttctgccgcagcccgtgaagaa
agccgtggtgcgcatgcgcaccgcgatttccccgagcgggatgatgacaagtggatgcgt
cacagcctgtggtattccgaaggcaaccgcctcgactacaagccagtgaatttgaagcca
ctgacagttgaaaccttccagcccaaaaagcggacgttctaa
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