Limnobacter thiooxidans: RGQ30_18840
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Entry
RGQ30_18840 CDS
T09704
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lto03000
]
RGQ30_18840 (prpR)
Transcription factors [BR:
lto03000
]
Prokaryotic type
Helix-turn-helix
Other families
RGQ30_18840 (prpR)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_2
AAA_5
HTH_8
AAA
AAA_16
HTH_23
AAA_7
DAGK_cat
Motif
Other DBs
NCBI-ProteinID:
BET26383
UniProt:
A0AA86MBE2
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Position
complement(2081969..2083567)
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AA seq
532 aa
AA seq
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MKPRIVVFSISALAGTLREIGRDYADSANIELVPKAYEDALSYARNRYYTDTADVFIAAG
SNGAFLQNQLEAPLVIIRTDGFDVMQALASARKTSAAVGLVSYEHAFDELEQFARAFDVP
LNTRTYRTPEDARRAVRELSQLGVQVVVGSGLVTEIAQEMGMDAILIYSRQGVVKAFEEA
IRLAGAKATGGVRRTNQTYTYHTEQDLIGASIAMDKLRSTIRLCGSIDLSVLIQGETGVG
KELVAQSIHTSSPRAGKPFVAINCASLTESLLESELFGYEEGAFSGAVKGGRAGMFESTQ
GGTVFLDEIGDMPMAFQTRLLRILEDSTVRRIGSVSSRKVDFRLLAASNVNLQQAVEEGR
FREDLYFRLNEMLIQIPPLRERSEDIAELAGYFLRTTPVRVSKARFDEFLNVALPVLKAL
PWPGNIRQLKNVCRRAAVLMLQESDIQDWRGWFPDLLQTPEAKPELFRTAVHSVVEGDHA
MNELALAYTRASKDNRAAIVRQALSLANGEVQKAADGLGLSRSTIWRLGKAI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaagaattgtggtgttcagcattagtgctttggcgggaaccctgcgggaaatc
ggccgcgactacgccgattcagccaacatcgagttggtgcccaaggcctatgaagacgcc
ttgtcttatgcgcgaaaccgctattacaccgacacggctgatgtgtttattgcagcgggc
tccaatggcgcgtttttgcaaaaccagctggaagcaccactggtgattattcgcactgac
ggttttgacgtgatgcaagccttggcctccgccagaaagacatccgctgcagtgggcttg
gtcagttatgaacatgcatttgatgaactagaacaatttgcgcgtgcattcgatgtacct
ttgaacacccgcacctaccgcacccctgaagacgcacgccgcgcggttcgagagctctca
caactcggtgttcaggtggtagtcggttcagggcttgtcaccgagattgcccaggaaatg
ggcatggacgccattctgatttattcccgccagggtgtggtcaaggcgtttgaagaagcc
attcgcctggcgggtgccaaagccacgggtggcgtgcgtcgaaccaatcaaacctacacc
taccacaccgagcaagacttgatcggcgcaagcatcgcgatggacaaactgcgcagcaca
attcgcctctgtggaagcattgacctatcggtacttattcaaggcgaaacaggggtaggc
aaagaattggtggcccaatccattcacacctccagcccgcgggctggaaaacccttcgtg
gccatcaattgtgcatcgctgaccgaaagcctgcttgaaagtgaattgtttggttatgaa
gaaggcgcgttttccggggccgtcaaaggagggcgcgccggcatgttcgaaagcacccag
ggtggcactgtgtttctggatgaaatcggcgacatgcctatggcgtttcaaacccgactg
ttgagaattctcgaagacagcactgtgcgccgaattggttcggtgtcatcgcgcaaggta
gacttccgtttgctggccgccagcaacgtgaatttgcaacaggcagttgaagaagggcgt
tttcgcgaagacttgtatttcaggctcaatgaaatgttgattcaaataccgccactgcgt
gaacgttctgaggacatcgcggaactggcgggctactttttgcgaacaactcccgtgcgg
gtcagcaaagcacgtttcgatgagtttctgaatgtggccctgccagttttgaaagcattg
ccttggcctggcaatattcggcaattgaaaaatgtttgccgcagggcagccgtgttgatg
cttcaggaaagcgatatacaagattggcgtggctggtttcctgatctgcttcaaacgcct
gaagcaaagccggaactctttcgaaccgctgttcacagtgttgttgaaggtgaccatgcc
atgaatgaattggctttggcttacacccgggcttccaaagacaatcgtgcagccattgtt
aggcaggctttgagtttggccaacggcgaggtgcaaaaagcagccgacggtttgggtttg
agtcgttctacaatctggcggcttggaaaagccatttaa
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