Limnobacter thiooxidans: RGQ30_19800
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Entry
RGQ30_19800 CDS
T09704
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lto03021
]
RGQ30_19800 (nusA)
03009 Ribosome biogenesis [BR:
lto03009
]
RGQ30_19800 (nusA)
Transcription machinery [BR:
lto03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
RGQ30_19800 (nusA)
Ribosome biogenesis [BR:
lto03009
]
Prokaryotic type
rRNA transcription factors
RGQ30_19800 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
BET26479
UniProt:
A0AA86IZF3
LinkDB
All DBs
Position
complement(2193613..2195082)
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AA seq
489 aa
AA seq
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MSRELLLLVDALAREKNVEKDIVFGALELALASATKKRFDEEVDVRVSIDRDTGDYDTFR
RWEVVTEEDFYDPAYQMVLDQALKNDPEAEMGDFIEEELEPVEFGRIGAQAAKQVILQRV
RDAEREQILQDFLDRGDKIVIGQVKRMERGDAIVESGRIEARLPRDQMIPRESLRPGDRV
RAFLWKVDRMARGQQVILSRTSPEFIKALFAMEVPEIEQGHLEIKGASRDPGMRAKIAVL
AHDRRIDPIGTCVGVRGSRVQAVTQELGGERVDIVLWSEDPAQFVIGALSPATVQSIVVD
EDQHVMEVVVDEAELAQAIGRSGQNVRLASDLTGWQINIMTPEESAKRSEEEIGKLRALF
TSKLDVDEDVANILIEEGFTGLEEVAYVPLAEMQEIEAFDADTVEELRTRARNALLTEAI
AREEIVEGAGDLMSIEGVDADLVGKLAAAEISDREGLAELAVDELVEIAGIGEDRAREII
MKARAHWFE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgagttgcttttattggttgatgcgttagcgcgtgaaaagaatgttgaaaaa
gacatcgtatttggcgcgcttgaactggcattggcttccgcaaccaagaagcgcttcgac
gaggaagtagacgtgcgcgtgtccatcgaccgcgatacaggcgactacgacaccttccgt
cgctgggaagtggttacagaagaagacttttatgatccagcctaccaaatggtgctcgat
caagccttgaagaatgaccctgaagctgaaatgggcgacttcatcgaagaagaactcgag
ccagtcgaatttggccgcatcggtgcccaggctgccaagcaggtcattctgcagcgagtt
cgtgacgccgaacgtgagcaaatcctccaggatttcttggaccgtggtgacaaaatcgtg
atcggtcaggtcaagcgcatggaacgtggcgacgccattgtggaaagcggccgcatcgaa
gcccgcttgcctcgcgatcaaatgattccgcgtgaaagccttcgtcccggcgaccgtgtg
cgcgccttcctctggaaagtggatcgcatggcccgtggccaacaggtcatcttgtcacgc
acctcgcctgaattcatcaaggccctgtttgccatggaagtgcctgaaattgaacaaggc
cacctggaaatcaagggcgcttcacgcgaccccggcatgcgcgcaaaaattgctgtgctg
gcccatgatcgccgcattgaccccattggcacctgtgtgggtgttcgtggctcacgcgtg
caggctgttacccaggaactgggtggcgagcgcgtagatatcgtgttgtggtctgaagac
ccggcccagtttgtaattggtgccttgtcgcccgccactgtgcagtccattgtggttgac
gaagaccagcacgtcatggaagtggtggttgacgaagccgaattggcccaagccattggc
cgtagcggtcaaaacgttcgcctggcctctgacctcactggttggcagatcaacatcatg
acgccggaagaatcggccaagcgttccgaagaagaaatcggcaagcttcgtgcactgttc
accagcaagctggatgtggatgaagacgttgccaacatcctgatcgaagaaggttttacc
ggtctggaagaagtggcgtatgtgcccttggctgaaatgcaggaaatcgaagcattcgac
gcagacactgtggaagaacttcgcactcgtgcacgcaatgcactgttgacagaagccatt
gcccgtgaagaaattgtcgaaggcgccggcgacctgatgtccattgaaggcgtagacgct
gatctggttggcaaattggccgcggctgaaatttctgaccgcgaaggcctggctgaactg
gccgttgacgagttggttgaaattgccggtattggagaagaccgtgcacgcgaaattatt
atgaaagcgcgtgcgcactggttcgagtaa
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