Limnobacter thiooxidans: RGQ30_20250
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Entry
RGQ30_20250 CDS
T09704
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
lto
Limnobacter thiooxidans
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
BET26524
UniProt:
A0AA86IZH2
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Position
complement(2247798..2251046)
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AA seq
1082 aa
AA seq
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MNSQIKAVSASAGSGKTYSLTQTLLEKIKSRELSPENLVAVTFTEAGASELKGRIRAVLL
KEGLFEEAQQVEEAYISTIHAFGFRLLKELAFDLGLPLSSRMLNEDEQTQLIRTSMVGSE
ALTDMSNALETFGYKTRMKGKKFVSAEAVFREHLQQFIDLLRSTGRHSAETEFLNRSVKW
IEKQYGTVDHERSPQDMAKSVHSCVVALLKEFPDCPIEIFQITAESARKAFQQSYRALER
ATQLEALLTDWALWAELSAIKITFKGSKDKPGYERYAELATSLKQTVDAHFAVHPGPLAH
ASRHFGGLLKGASETLAGYSDRKKKSALLDFTDMVAHAEQALRNTESRQRLLDCIRMVVV
DEFQDTNPIQFAFLWHLIGSGVPSILVGDVKQSIMGFQGADPRLFEALIQNPDVSVSSLE
SNWRSQPKLMEVINALTLGLAGEKGMNANYHPLEAKGKPSPLKPLHVVEFRQKPDQNKKK
DGEDDDVIHPSELVWRASNMAQVLKHKLQSGLMAIDRRTGLPRPLKGGDIAVLCPTNGML
AVYAREFEKVGLSVNLQRQDWFDTDEVQLAIQVLALIANPSDKHAQLMVATSDFECMPLE
EAVSALLGEGLLHLPIFRTIDALRKSTATLLMKDVVEAMLEESGLTDLASRWPDHAQARA
NLFKLIGLAREFSDAHAETLAAAGFHGKSIGTFIGWLHFLKAQRKDDLCPRANYNDEHAI
ELTTWHKSKGREWPIVVVAGMDKSPTVGVPDASIGYLDFNDFDSIIENSQIEFSPDYDFD
AKREALLESLRLEANQVSLRELYVALSRPRDQLVLEWLPYHLSSKSKSKRRIQLLAQLTD
FKVIEKSVFISGQEFEALVDVLNYSPMRIVEPIIQLRPPAKAHGRLAIETRTVQEERFRA
QVSPSLLQAGEAHAVPCKVSTISQPIDFATGSPLNKLGTAIHRVLEIALAGHELHLKSPV
VQAAMQAEGLSTENLDQLQELAKQIRRHFEKSPGSAQIYVEQVVMGRDGAGGEVVVGQVD
CLVKTPDATVVIDHKSGALTKDAESVWQSYALQLQVYGRLFGDAAYALTRVRAGEIIEIA
GS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacaaatcaaagcggtttctgcttcggcgggcagcggtaaaacctattcattg
acgcaaaccttgcttgaaaaaatcaagtcgcgagagttgagccctgaaaacctggtggcg
gtgaccttcactgaagccggggcttcggaattgaaaggccgaattcgggcggtgttgttg
aaagagggtttgtttgaggaagcgcagcaagtcgaagaagcttacatttcaaccattcat
gctttcggttttcgcttgctcaaagaattggcttttgatctgggcttgccactgtcgtca
cgcatgttgaatgaagatgagcaaacccaactgatacgaacttccatggttggttctgaa
gcattgaccgacatgtcgaatgcccttgaaacctttggttacaaaaccagaatgaaaggc
aaaaagtttgtttctgcagaagcagtgtttcgggaacacctacaacagtttattgatttg
ctgcgtagcactggccgacattcggctgagactgaatttctaaaccgaagcgttaagtgg
attgaaaaacaatacggcacagtcgaccatgaacgctctccacaggacatggccaaatct
gttcattcctgcgtagtcgcgttgcttaaagagtttccggactgtccaattgaaattttc
cagattacagcggaaagtgcgcgcaaggcgtttcaacaaagctaccgggctttggaacgg
gccacccagttggaggccttgctcacggattgggcgttgtgggcagaattgtcggcgatc
aaaatcaccttcaaaggatcaaaagacaagccgggatatgaacggtatgcggaattggcg
acctctctgaaacagacagtggatgcccattttgctgtgcacccgggcccattggcccat
gcaagccgacatttcgggggactgcttaaaggggcttcagaaaccttggcgggttattcc
gaccgcaagaagaagtcggcattgctggactttacggacatggttgcccatgcggagcag
gctttgcgcaataccgaaagcaggcaacgattgctcgactgcatccgcatggtggttgtg
gatgagtttcaggataccaacccgattcagtttgctttcttgtggcacctgattggttcg
ggtgtgcccagcatactggtgggtgatgtgaagcaaagcatcatgggttttcagggggct
gatccacgtttgttcgaagcactgatccaaaatcctgatgtttcggtcagcagccttgaa
tcgaactggcggtcacaacccaaattgatggaagtaatcaacgcattgaccctgggcctt
gctggtgagaaaggcatgaacgccaattaccatccgcttgaggcgaagggcaagccttca
ccgctgaagccactgcatgtggtggagttcaggcaaaagcccgaccaaaacaaaaagaag
gatggtgaggatgacgatgtcattcacccttctgaattggtgtggcgcgccagcaatatg
gctcaggtacttaaacacaagttgcaatctgggctgatggcaattgatcgacgaacaggt
ttgccacgccccctcaaaggcggagacattgctgtgctttgccctaccaacggcatgttg
gcggtgtatgccagggaatttgaaaaagtcggtttgtctgtcaatttgcagcggcaagac
tggttcgacaccgacgaggtgcaattggcgattcaagtgctggcgctgattgccaacccc
agcgacaagcatgctcagttgatggttgcaacatcagacttcgaatgcatgccacttgaa
gaggcggtgagtgcattgttgggcgaaggtttgctccatttgccgatattccgaaccatt
gacgcattgcgaaagtccacagccactttgttgatgaaggatgtggtcgaggccatgctg
gaagaaagcggactgactgatttggcttcgcgctggcccgaccatgcgcaggcgcgagcc
aacctgttcaagttgattggtttggcacgcgagttttcggatgcgcatgctgaaaccctg
gccgctgcaggttttcacgggaaaagcatcggcacctttattggttggttgcatttcctg
aaggcacaacgaaaagacgacttgtgtccacgggcgaattacaacgacgagcatgccatt
gaattgacgacctggcacaagtcaaaggggcgggaatggccgattgtggtagttgccggt
atggacaaatcacccacagtgggagttcctgatgcctcaatcggctatctggatttcaat
gattttgattcaatcattgaaaacagccaaatcgaattttcgccagattacgattttgat
gccaagcgcgaggccttgctggagtcgcttcgccttgaggccaatcaagtttcattgcgt
gaactgtatgtggcactgagccgaccgcgcgaccaactggtactggaatggcttccttac
catttgtcttcaaaatccaaatcaaaacgacgtattcaactgctcgcccagttgactgat
ttcaaggtgatagagaaatcggttttcatttcagggcaagagtttgaggccttggtggat
gtattgaattactcaccaatgcgaattgtggaaccaatcattcaattgcgccccccagcc
aaggcgcatgggcggttggctattgaaacgcgcacagtgcaggaagaacggtttcgcgcg
caggtgtcaccttccttgttacaagcgggtgaagcgcatgcagtgccttgcaaggtcagc
accatttcgcagcccattgactttgcaacaggaagcccattgaacaaactgggtacggcc
attcaccgtgtacttgaaatagccttggcgggtcatgaattgcacttgaaatcacctgtg
gtgcaggcagcgatgcaggctgaagggcttagcactgaaaacctggatcagttgcaggaa
ctggccaagcagatacgcaggcactttgagaagagccccggcagtgcacagatttatgta
gagcaggtggtgatgggtcgtgacggtgccggcggtgaggtggttgtggggcaggtggac
tgcctcgtgaaaacgcccgatgcaacagttgttattgatcacaagtctggcgctttgacc
aaagatgctgaaagcgtttggcaaagctacgctttgcagttgcaggtgtatgggcgattg
tttggtgatgctgcttatgcgctgactagggtaagggcgggggagataatagagatcgct
gggtcatga
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