Limnobacter thiooxidans: RGQ30_20600
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Entry
RGQ30_20600 CDS
T09704
Name
(GenBank) glucoamylase family protein
KO
K13688
cyclic beta-1,2-glucan glucanotransferase [EC:
2.4.1.397
]
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lto01003
]
RGQ30_20600
Enzymes [BR:
lto01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.397 cyclic beta-1,2-glucan glucanotransferase
RGQ30_20600
Glycosyltransferases [BR:
lto01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RGQ30_20600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GH94_b-supersand
Glyco_hydro_94
Glycoamylase
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
BET26559
UniProt:
A0AA86J3M5
LinkDB
All DBs
Position
complement(2285530..2294124)
Genome browser
AA seq
2864 aa
AA seq
DB search
MMARFRALLSSLKALAAYSPESAVDDAVTGEAPLRAELFTAAQMERHGWQLASIHVAALT
QQADRLLPRLADNRRALLSACSRLSKGEGPQFPAAEWLLDNIHLFEEEIRTAERHLPKGY
SRELPRLSTGPSAGLPRVYDLAIESVAHGDGQLGLGSLTHFFAAYQQVQPLRLGELWAIP
IMLRLALIENLRRVAVAVAASRDERNLAAKWSDRMLDVAHREPKGLILVVADMTRSDPSM
SPPFVAELVRRLHGHSTALAMPLSWLEQRLAEINQTTDQLVQLEAQQQAADQVTVSNSIG
SLRLLAATDWSAFVESLSTVDKTLRTDPANTYSAMDFATRDTYRHAIEQIARDTNANEDN
VAHSAIAAARDAANADPTQCPRQAHVGYHLIGPGRFALEQMSGSGLHALQRLQRLFIRHP
LAWFSTSIITLSILFPVLALYWANSLAPMPWLSGGLLWVVGAALLLGASHLAVAWVNWVV
TLFAVPKPLPRMDFSLGIPSASRTLVVVPTMLDSEAGVAALIEALEVRFLANRDTQLQFG
LLTDFHDYTAEQAPGDDILLRAAITGVESLNAKYAAAEDETEVSSRFFLFHRPRRWNARE
GVWMGRERKRGKLGELNALLRGGSREFAAVVGNTAQLQGVRYVITLDTDTQLPRDAAWKL
VGTMAHPLNQPRFGAEANASRVVEGYGILQPRVGVSLLAANCTRYGRLHGSDSGIDPYTR
AVSDVYQDLYGEGSFIGKGIYDIDAFEQALAGQFPDNLVLSHDLLEGCYARSGFLSDVDL
VEDSPTRYDADIKRRHRWIRGDWQVISWLWPRVRRAPNPLSALSRFKILDNLRRSLVPIA
LVACFALGWTALQPAWLWTLVVSAVLFVPSLLGPLTELVHKPTGLPIQQHLKAVLQSLLR
SLAQAGLSLACLVFEACVSADAIARTLWRLHGSRRRLLEWEPSANAARVNHQSPAQDFLR
TVRRMWVAPALSAVMALGLVGWQPDSLAAASLPLLAWFFSPAIVWWISQPLVHARTTLNE
EQVLQMRELTRRTWAFFETFVTAEDNFLPPDNMQEKPELRVAHRTSPTNIGLSLLANLAA
RDFGYLTEGQLIERTSATFNAMDKLERYHGHFLNWYDTRTLEPLRPAYVSSVDSGNLAGH
LLTLRAGLLMLAAAPLRFDRLRSGITDTLELLRKTTTQNKPDGLVRLATVLDEAFPADAE
TGTRPAAQALADLHNCALLVHAKLIQAAPAGDEALLWSRAMVRQCAAAQDELLQLDTNAF
DQDRRMLLCKLAQRAGELAEMEFGFLYDPVSHLLAIGYNVDERRRDTGSYDLLASEARLA
IFIGIAQAQLPQQAWFALGRHATSQAGRAVLLSWSGSMFEYLMPMLVMPTFDNTLLEEAM
RGAVARQIDYGNKRNLPWGVSESGYNLTDSHLNYQYRAFGVPGLGLKRGLGEDMVIAPYA
TVLALMVDPAAAADNLQRLTGEGLAGLFGYYEAADYTPLRLRRGETCAVVRSYMVHHQGM
SLLALAHVLLDQPMQKRFGFDPQLRATLLLLQERIPKAIAFHETSERIFDRASFSNIEMP
LRIMRTPHTPSPEVQLLSNGRYLVMLTNAGGGYSRWKELAISRWREDTVADSWGSFCYLR
DVETGSFWSSMHQPTRRKPDLDETIFSEGRAEYRRQDAGIEAYTEIVVSPEDDIELRRLQ
LTNLSATRRTIEITTYTEPVLSPAAADAQHPAFSKLFLQTEILKDPAALLCARRPRSNDD
SQPWMFHLVAPHGAKSGPVSHETDRARFIGRGRSLQSPAALRKSGPLSGTAGAVLDPVLA
TRCVITLEPDQTATIDLVYGVAESREACVALVHKYRDRHLADRVFELAWTHSQVNLRQIN
ATEADAQLYARLANSVMYSEPALRAAASVLVRNRRAQSGLWGYEISGDLPIVLLQLSDSA
NIQLVHQLVQAHAWWRLKGLAVDLVIWNEERDVYRQRLHEQILGLIAGSIESRESDRPGG
IFVRQAAHIALEDRILLQSVARAIISDRLGTFAEQVDRKRIPVRRIRALEITRRMPLPAP
ATAQPSRPQLLFDNGLGGFRPDGREYIVAPPAGSRPPAPWANVIANPRFGTVITDAGSSY
TWCENAHELRLSPWHNDAVTDECGEVLYLRDEDTGHVWHPTSLPQRDDEPDDRAGSVFTT
RHGFGYSVFEHSEFGIHSELTVFVANDAAVKFSRLVLTNQGTRPRNLSATSYVEWVLGDM
RAKTSPHLCTEIATDTGAVLARNRYSNQFGNWVAFLDIDEGDRSNATMTCDRDEFIGRNG
SLRRPAAMGRAHLSGRSGVALDACAAIQVMLRLEPGQSREITFRLGMGRSLDEATQLVRR
FRGSAATRHALEEVNAHWRHTLGAVQVKTPDPAINLLANGWLVYQTLGCRMMARSGFYQS
GGAFGFRDQLQDAMALVHTSPDTLREHLLVCASRQFPEGDVQHWWHPPSGHGVRTQISDD
YLWLPLALCRYLQATNDTGVLEERVPFLEGRVLGADEESYYDLPARSGQEASLYDHAVLA
LLHGLRFGAHGLPLMGAGDWNDGMNRVGHHGQGESVWLGFFLCDVLRQFAPLARARGDEV
FANRCETERSLLAQRLEANAWDGAWYRRAWFDDGQPLGSSSSVECQIDSIAQSWSVLSGV
ASPDRASRAMDSLDARLVQGNTGVVRLLDPPFDRQGPDPGYIAGYLPGVRENGGQYTHAA
VWAAMAFAAQADAKRAWQVMDLINPLNHARTADEVAVYKVEPYVVAADVYSVAPHTGRGG
WSWYTGSAGWMYRLVIESLLGLRLQTSAEGAMLRVEPCVPADWTAYSIDYRYRETTYRLQ
IEVLDEAAALLIELDGIAVEGVGIPLVDDGLPHKVLIRIKRFSV
NT seq
8595 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcggtttcgcgctctgttgtcctcgctcaaggcacttgccgcatactcgcca
gaatctgcagttgacgatgcagtcactggtgaggccccattgcgggccgagctttttact
gcagcacagatggagcgccatggatggcaactggcatccatccatgtcgcggcattgact
caacaggccgatcgtttactgccccgcctggcggacaatcgccgggcactgctctccgcg
tgcagtcggctcagcaaaggggaggggccacagtttcctgccgccgaatggttgttggac
aacattcatttgtttgaagaagaaatccgcacggccgaacgtcacctgccaaaaggctac
agccgcgagttaccacgactcagtacgggccccagcgctggtcttccccgagtttacgac
ctggccattgaatcggtggcgcatggcgatgggcagttggggcttggcagcctcacccat
ttttttgcagcctaccagcaggtgcagcctttgcgcctgggcgaactttgggccattcct
atcatgctgaggctggcattgattgaaaacttgcggcgagttgcggtggcagtggctgcc
agccgcgatgaacgcaatctggctgcgaaatggtcagaccgcatgctggatgtcgcccac
cgcgagcccaaaggactcatcctggtcgtggcggacatgacgcgttctgatccgtccatg
agcccacccttcgtggccgaactggttcgccgtctgcatggccacagcaccgcgctggcc
atgcccttgagctggcttgagcaaaggctggctgaaatcaaccagaccaccgatcaactg
gtacaacttgaggcacaacaacaggcagcagaccaggtcaccgtcagcaacagcattggc
agcttgcgcttgctggccgccaccgactggtcagcctttgttgaaagtttgtcaaccgtt
gacaaaaccctgcgcactgaccctgccaacacttacagcgcgatggattttgccacgcgc
gacacctatcgccatgcgattgaacaaattgcccgcgacaccaatgccaacgaagacaat
gtcgcccactccgcgattgccgcagcacgcgatgcagcaaatgcagacccgacgcaatgc
ccgcgacaagcgcacgtgggttatcacctgatcggcccagggcgatttgcccttgaacaa
atgtcaggtagcggtcttcatgccttgcaacgcctgcagcgtctgtttatccgccatcca
ctggcatggttcagcaccagcatcatcaccctgagtatcctgtttcctgtgttggcactt
tattgggccaactcgctggcacccatgccatggctgtcgggtgggctgttgtgggtcgtc
ggggctgccctgctactgggcgcgagccaccttgctgtagcctgggtcaactgggtggtg
accctgtttgccgtgcccaaaccgctgcctcgaatggatttctccctcggcattccgtct
gcctcacgtaccttggtcgtggtgccaaccatgcttgacagcgaagcgggcgtggccgca
ctcatcgaggccctcgaggtgcgctttcttgccaatcgagatacccagcttcaatttggt
ttactgactgactttcatgattacaccgctgaacaggcgccaggcgatgacatccttttg
cgcgcagccatcaccggcgttgagtcattaaacgccaagtatgctgctgcagaagatgaa
acagaagtcagcagccgtttctttctgtttcacaggccacgtcgatggaatgcacgcgaa
ggcgtctggatggggcgcgaacgcaaacgcggcaaactcggggaattgaatgccttgctg
cgtggtggcagtcgtgaattcgctgcagtggtgggcaacacggcgcaactgcaaggtgtg
cgctacgtcatcaccttggacaccgacacccagttgccgcgtgatgcggcctggaaactg
gtcggtaccatggcgcacccgcttaaccagccacgatttggagctgaggccaatgcttca
cgcgtggtggaaggttatggcattttgcagccacgagtaggcgtcagcctgctggctgcg
aattgcacgcgctatggtcgcctgcacggcagcgattccggcattgacccctacacccgc
gcagtcagtgatgtgtatcaggatctgtacggcgaaggctccttcatcggcaagggcatc
tacgacattgacgcattcgagcaggctttggctggtcagtttccagacaacctggtgctg
agtcacgacctgcttgaagggtgttacgcccgcagcggttttttgagcgatgtcgacctg
gttgaagattcccccacacgttacgacgccgacatcaaacgtcgacatcgctggatccgt
ggcgactggcaggtcatcagctggctgtggccgcgcgtgcggcgtgcacccaacccgctg
tccgcattgtcccgattcaagatactcgacaacctcaggcgcagccttgtaccgattgcg
ctggtggcctgctttgcgttgggatggaccgcgttgcagccagcctggttgtggacattg
gtagtcagcgcagtcctgtttgtgccctctttgctcggacccttgaccgagttggttcac
aaaccaacgggtttgccaatacagcaacacctgaaggctgtccttcaatcgctgttgcga
agccttgcccaggcaggcctttccttggcctgtcttgtctttgaggcttgcgtgagtgcc
gatgcgatagcacgcaccttgtggcgcttgcatggctcgcgccgtcgcctgcttgaatgg
gaacccagtgccaacgccgcgcgtgtaaaccaccagtcgccagcgcaggattttttacgc
acagtgcgccgaatgtgggtcgcccctgcattgtctgccgtcatggcattggggctggtt
ggttggcaacccgattcacttgcagcagcctcgttgccgcttcttgcatggtttttttct
ccagccatcgtgtggtggatcagtcagccactggtgcatgcccgcaccacattgaatgag
gaacaggtgcttcaaatgcgcgagttgactcgccgcacctgggccttctttgaaaccttc
gttacggctgaagacaatttcctgccacccgacaacatgcaggaaaaaccggagcttcgc
gtggcgcaccgcacctcgcccaccaacatcggtctgtcgctgctggccaatctggccgca
cgcgacttcggttacctcaccgaggggcaactcatcgagcgaacttcagccaccttcaat
gcaatggacaagctcgagcgttaccacggacattttctcaactggtacgacacccgcaca
ctggagccgcttcgcccggcttatgtgtccagcgtggacagcggcaacctggctggccac
ctgctgaccctgcgtgcgggtctgttgatgttggccgcagcccccctgcggtttgatcgt
ttgcgcagtgggatcaccgacacattggaattgctgcggaaaaccaccacacagaataag
ccggatgggcttgtgcgcctggccaccgtgctggatgaagcgtttccggccgatgcagaa
acaggaactcggcctgctgcccaggctttggctgatctgcacaattgcgctttgctggtt
catgcgaagcttatccaagccgcacctgccggcgatgaagcactgctgtggagtcgcgcg
atggttcgccagtgcgcggcggcgcaggatgaactcctgcaacttgatacaaacgccttt
gaccaggatcgccgcatgctgttgtgcaagcttgcgcagcgtgcaggcgaactggctgaa
atggaattcgggtttctgtacgacccggtttcccatttactcgcaattggttacaacgtg
gatgaacgccgtcgcgacaccggatcctacgatctgcttgcgtccgaagcgcgcctggct
attttcattggaattgcgcaggcccaactgccgcaacaagcctggtttgcgttggggcgc
cacgccacatcgcaagcgggccgtgcggtgttgttgtcctggagtggctccatgtttgaa
tacctgatgcccatgctggtgatgcccactttcgacaacaccctgctggaagaagccatg
cggggtgccgtggcgcgtcaaattgattacggtaacaagcgcaacctgccatggggcgtg
tcggagtcagggtacaacctcaccgactcgcacctgaactaccagtaccgcgcattcggc
gttccagggcttggactcaagcgggggctgggagaggacatggtcattgcgccgtatgcc
acagtgctggccttgatggttgaccctgcggcggcggcagacaatcttcagcggttgacc
ggtgaaggtttggctgggctgtttggctactatgaagccgcagattacacccccttgcgg
ttgcggcgtggagaaacgtgtgcagtggtccgttcctacatggtgcaccaccagggcatg
agcttgttggcactggcccatgtgttgctggatcagcccatgcaaaagcgtttcgggttt
gatccgcaactgcgcgcgacattgctgctgcttcaggaacgcattcccaaagccattgcc
tttcatgaaacaagcgagcgtatttttgatcgcgccagcttttccaacatcgaaatgccg
cttcggatcatgcgcacaccccacacgccttcacccgaggttcaactgctctcgaacggt
cgttacctggtgatgttgaccaatgccggtgggggctacagccgctggaaagaactggcc
attagccgctggcgcgaagacaccgtcgctgattcgtggggcagcttctgctacctgcgc
gatgtggaaaccggcagtttctggtcaagcatgcatcagcccacgcggcgaaagcctgac
ctggatgaaaccattttctctgaaggccgtgccgagtaccgtcgacaggatgcaggcatt
gaggcctacacggaaatcgtggtttcacccgaagacgacatcgagctgcgtcgcctccaa
ctgacgaacctcagtgccacgcgccgcaccatcgaaatcaccacctacaccgagccagtg
ctgagccccgcggcggctgatgcacaacacccggccttcagcaaactgtttttgcaaacc
gagattctcaaggaccctgcagcgctgctttgtgcaaggcgcccccgatcgaacgacgat
tcacaaccctggatgtttcatctcgtggcccctcatggcgccaagtcagggccggtgtcg
catgaaaccgatcgggcccgcttcattggtcgtgggcgaagtttgcaatctcctgcagca
ttgcgcaaaagcgggcccttgtcgggcactgcgggtgcagtgcttgatccggtgctggcc
actcgctgcgtgattacgctggaacctgatcaaactgccaccattgaccttgtgtatggt
gttgctgaaagccgcgaagcctgtgtcgcgctggtccacaagtaccgggacaggcatctc
gccgaccgcgtgtttgaacttgcttggacccacagccaggtgaatctgcgacaaatcaac
gccaccgaagcagacgcccaactgtatgcccgcctggccaacagcgtcatgtattccgag
cctgcactgcgtgcagccgccagtgtgctagtgcgcaaccgccgcgcccaatccgggttg
tggggttatgaaatttccggtgatctgcctatcgtcctgttgcagctaagcgattccgca
aacattcaactggttcaccaactggtgcaggcgcatgcgtggtggcgattgaaagggctt
gcggttgacctggttatctggaatgaagaacgcgatgtgtaccgccaacgtttgcatgaa
caaatactggggctgattgcgggcagcattgaatcccgtgagtcagacagacccggtggt
atcttcgtgcggcaggccgcacacattgcgcttgaagaccgcattttgctgcagtcggtt
gcccgcgcgatcatcagcgacaggctgggcacctttgccgaacaggtggaccgcaaacga
attccggtgcgccgtatccgcgcgctggaaatcacacgaagaatgccactacctgcaccc
gccaccgcgcagccatcacgtccccaactgctattcgacaacggcttgggtggtttcaga
cccgatggtcgcgaatacatcgtcgcgccacctgcgggatcgcgtccacccgccccctgg
gccaacgtcattgccaatccgcgctttggcactgtgataaccgatgcaggtagcagctac
acctggtgcgaaaacgcccatgaactgcgcctttcaccctggcacaacgatgcggtgact
gacgaatgtggtgaagtgttgtacctgcgcgatgaagacaccggccacgtctggcatccc
acctcattgccgcaacgcgacgatgaacccgatgaccgggcagggtctgtgtttacaact
cgccatggctttggctacagcgtctttgaacacagtgagttcggaattcacagcgaactg
actgtattcgttgccaacgatgcagccgtgaagttctcaagactcgtgctcaccaaccag
ggcacacgtccgcgaaatctcagcgccacatcgtatgtcgagtgggtgttgggtgacatg
cgcgccaaaacatcgccccacctgtgtactgaaattgccaccgacaccggcgcggtgttg
gctcgcaaccgttacagcaaccagttcggcaactgggttgcatttctcgacattgacgaa
ggcgaccgttcaaacgccaccatgacctgcgaccgcgatgaattcatcggtcgaaatgga
tccttgcgcaggcctgctgccatggggcgcgcgcatctttcgggtcgcagcggtgttgcg
ctcgacgcatgtgcggccattcaggtcatgcttcggctcgagccggggcaatcccgcgaa
attacctttcgcttaggaatgggcagaagtcttgatgaagccactcaactggtgcgccgc
tttcgcggcagtgcagccacacggcacgcgctcgaggaagtgaacgcccattggcgacat
acactgggtgccgtacaagtcaaaacgccagaccccgcaatcaatctgcttgccaatggt
tggttggtgtatcaaaccctgggttgccgcatgatggcccgcagcggcttttatcaatcg
ggcggagcattcggttttcgggaccagctgcaagacgccatggcgctggtgcacaccagc
ccggataccttgcgtgaacacctgctggtctgcgccagccgacagtttccggaaggtgat
gtgcagcactggtggcacccaccttcaggtcatggcgttcgcacccagatttccgacgat
tacctgtggctgccactggctttgtgccgctacctccaggccacgaacgacaccggtgtg
ctcgaggagcgcgtgccgttcctcgaaggccgggtgctgggtgccgatgaagagtcttac
tacgacttgcctgcccgttccggtcaggaagccagcctatacgaccacgccgttctggcc
ttgttgcatggccttcgtttcggcgcgcatggtttgcccttgatgggcgccggcgactgg
aacgacggaatgaaccgcgtgggccatcacggtcaaggcgaaagcgtgtggctcggcttc
ttcctctgtgacgtgttgcggcaattcgcccctctggcacgcgcccgtggtgacgaggtg
tttgccaatcgctgtgaaaccgagcgcagccttctcgcacaaaggcttgaagccaacgcc
tgggatggcgcatggtatcgccgtgcctggtttgacgacggccagccccttggttccagc
agcagtgtggaatgccagatcgattcaattgcccaaagctggtcggtgttgtccggcgtg
gccagccctgatcgggcaagtcgggcgatggattcactcgacgcacggttggtgcagggc
aataccggcgtggtgcgtctgctcgacccgccattcgatcgacagggtcccgaccctggc
tacattgccggttacctgcctggtgtgcgggaaaacggcgggcagtacacccatgcagca
gtgtgggcagccatggcattcgcagcacaagcagatgcgaaacgcgcttggcaggtgatg
gacctgatcaatccgctcaatcatgctcgaacagccgatgaagtggcggtgtacaaggtc
gaaccctatgtggttgccgccgatgtttacagcgtggccccgcacaccgggcgtggcggc
tggagttggtacaccggctcggcgggctggatgtacaggctggtgatcgaatcgctgctg
ggcttgcgcttgcagaccagtgcagaaggggcgatgctgcgagttgaaccttgtgtcccc
gccgactggaccgcttattcaatcgactatcggtatcgtgaaaccacctatcgccttcaa
attgaagtgcttgatgaggccgcagcactacttatcgaactggatgggatcgctgtagag
ggagtgggaattccattggtggacgatgggctgccacacaaggtgttgatacgcatcaag
cggttttcggtgtag
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integrated database retrieval system
