Limnobacter thiooxidans: RGQ30_22010
Help
Entry
RGQ30_22010 CDS
T09704
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
lto
Limnobacter thiooxidans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
HTH_28
HTH_29
AAA_5
AAA
HTH_23
IstB_IS21
AAA_16
AAA_19
HTH_17
AAA_22
HTH_Tnp_1_2
AAA_7
AAA_30
Xre-like-HTH
MCM
Motif
Other DBs
NCBI-ProteinID:
BET26700
UniProt:
A0AA86J8T3
LinkDB
All DBs
Position
complement(2440975..2442366)
Genome browser
AA seq
463 aa
AA seq
DB search
MRGGVEVLLLEDDPALNELIVEEMEAQGHRVTAMHALADAAQWLATHRTDLIVTDLRLPD
GDGMELLKIAQASPEPPAVIVVTAFGSVRQAVKALQAGADDFLTKPLDLEHLLLSTRRVL
SNRAIRSELQQFRQLNTDHGFHGLYGKSPAVKKLFMQIQMLAKAQGPVLILGESGTGKEL
VARAVHAESPRAGKPFLAVNCAGIPAELLESEFFGHASGSFTGAKTGRKGLLQQADGGTL
LLDEIGEMPLMLQAKLLRALQDGWIRPVGEDQEIQVNVRILAATHQDLRKAVEEGRFRED
LYYRLETFALHVPPVRDREDDIDLLALRFLKVSSTAQQKQVKGFTADALKALRRYSFPGN
VRELQNVVERAVVFCAGEQIALKDLPERVQLNAGQAVVPSTGQNPAVHETALLEGAVWPT
LDEMQKRYVQLILKEVDGNKRRAAALLGIGRRTLYRWLGEEQE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtggcgttgaggtgttattgctggaagatgacccggcactgaatgaattgatt
gttgaagaaatggaggcgcagggacaccgtgtcaccgccatgcatgccttggcagatgct
gcgcaatggctggccacacaccgcaccgacctcattgtcactgaccttcgcctgcccgat
ggcgacggcatggagctgctgaaaattgcgcaggcatcgcccgagccaccggctgtcatt
gttgtcaccgcgtttggcagtgtgcggcaagcggtcaaggccttgcaggcgggggccgat
gattttctgaccaagccactcgaccttgaacatctcttgctcagcacccggcgtgtgctg
tcaaaccgcgccattcgcagcgagctgcaacagtttcgccagttgaacaccgaccacggt
tttcatgggctgtatggcaaaagccctgcggtcaaaaagctgttcatgcaaattcaaatg
ctggccaaggcgcaaggcccagtgctcattctcggtgaaagcggcaccggcaaggaactg
gtcgcacgcgccgtgcacgcggaaagcccgcgcgctggcaaaccctttctggcggtcaac
tgcgcaggcattcctgctgagcttttggaaagcgaatttttcggccacgccagtggctca
ttcactggcgcaaaaaccggtcgcaaagggctgttgcagcaagccgatggcggcaccttg
ctgctggatgaaattggcgaaatgccgctgatgctgcaggccaaactgttgcgcgccctg
caagacggctggatacgccccgtgggcgaagaccaggaaatacaggtgaacgtgcgcata
ctggccgcaacccaccaggatctgcgcaaggccgtggaagaagggcgctttcgcgaagac
ctgtactaccggcttgaaacctttgcccttcatgttccccctgtgcgtgaccgcgaagac
gacattgatctgctcgccttgcgatttctcaaggtgtcatccactgcacaacaaaagcaa
gtgaaaggcttcactgccgatgccttgaaagcactgcgccgttacagtttccccggcaat
gtgcgcgaactgcaaaacgtggtggaacgcgccgtggtgttttgcgctggcgaacagatc
gccttgaaagacttgcctgagcgggtgcagctgaatgcagggcaggcggtggtgcccagt
acagggcaaaacccggccgttcacgaaaccgcactgctggaaggcgctgtttggcccacg
ctggatgaaatgcaaaagcgctacgtgcagttgatcctgaaggaagtggatggcaacaag
cgccgtgctgccgcattgctgggaattggccggcgcaccctgtaccgttggctgggtgaa
gaacaggagtag
DBGET
integrated database retrieval system
