KEGG   Limnobacter thiooxidans: RGQ30_22040
Entry
RGQ30_22040       CDS       T09704                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
lto  Limnobacter thiooxidans
Pathway
lto00061  Fatty acid biosynthesis
lto00071  Fatty acid degradation
lto01100  Metabolic pathways
lto01212  Fatty acid metabolism
lto02024  Quorum sensing
lto04146  Peroxisome
Module
lto_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:lto00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RGQ30_22040
   00071 Fatty acid degradation
    RGQ30_22040
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RGQ30_22040
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RGQ30_22040
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:lto01004]
    RGQ30_22040
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lto04147]
    RGQ30_22040
Enzymes [BR:lto01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RGQ30_22040
Lipid biosynthesis proteins [BR:lto01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RGQ30_22040
Exosome [BR:lto04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RGQ30_22040
  Exosomal proteins of breast cancer cells
   RGQ30_22040
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: BET26703
UniProt: A0AA86J0C3
LinkDB
Position
complement(2444582..2446273)
AA seq 563 aa
MSAAQYEKFETLLDCLDHWASVQPNKVYFTQPFSAEKTVDYTWAQVADQVNRMAAYLQSL
NLPEKTHIGILGKNSAHWIMADLAIWRAGHVSIPLYPTLNAETAEYVLDNSDAKMIFIGK
MDELWRVVEKGIPLDMPTITLPLAPQLKHAKQWDAIVAATAPTTKPVKRNKDEMATMLYT
SGSTGKPKGVMISFNAMISALRGTSQVMSFNSTDRMISYLPLAHAAERAILETGSLFYGF
HVYFSFGLDSFIQDLQRARPTLFFSVPRLWTKFYNGICGKIPLGVQHIIFRIPVLSGLFK
KFLLKKLGLAEVRMALSGSAPLAPALMSWYRNLGLDLLEGYAMSENFAYSHCSLPGKVRV
GYVGNTYPGVECKISEVGEVLVKSPCNMMGYYKNPELTAESYTEDGFLKTGDMGEIDAQG
RLKITGRVKELFKTSKGKYIAPVPIENRLNGHELIEAVCVTGPSFSQPFALVMLPLEEHK
KLEQNPGEASHVESEMTELLAHVNGQLEAHERLSCIVVVKDIWSMENGFLTPTMKIKRNV
IEANYLPKAEGWVALKKPVVIES
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgagtgcagcgcagtacgagaaatttgaaaccctgctggattgcctggaccactgggcc
agcgtgcaacccaacaaggtgtatttcacacagccattttcagcggaaaaaaccgtggac
tacacctgggcccaggtggctgaccaggtcaaccgcatggctgcctacctgcaatcactc
aacctgcctgaaaaaacccacatcggcatcctgggtaagaacagtgcgcactggatcatg
gccgacctggccatttggcgcgcagggcatgtgtccatccccctgtatcccacactgaac
gcagaaactgcggaatatgtactggacaacagcgacgccaaaatgattttcatcggcaag
atggacgagctgtggcgcgtcgtggaaaaaggtattccactggacatgcccaccatcacc
ttgccattggccccgcagttgaaacacgccaaacaatgggatgccattgttgcagccact
gcgccaaccaccaagcctgtcaagcgcaacaaagatgaaatggccaccatgctgtacaca
tcgggtagcaccggcaaacccaaaggtgtgatgatttctttcaacgccatgatcagcgcc
ttgcgcggtacctcgcaggtgatgtcgttcaacagcaccgatcgaatgatttcctacctg
ccattggcccacgcggccgagcgcgccattctggaaaccggttcgctgttttatggcttc
cacgtgtatttctcgttcgggctcgacagttttattcaagacttgcaacgcgcgcgccca
accctgtttttctctgtgccgcgcttgtggaccaagttctacaacggcatttgcggaaaa
attccgctcggtgttcaacacatcattttccgcattccggtgttgtcgggcttgttcaag
aaattcctgctaaaaaagctgggcttggccgaagtgcgcatggccttgagtggttcagcg
ccgctggcacctgccttgatgtcctggtatcgcaacctggggctggacttgcttgaaggc
tatgccatgagcgagaacttcgcctattctcactgcagcctgcccggcaaggtgcgcgtg
ggttacgtgggcaatacttatcccggtgttgaatgcaagatttccgaagtgggtgaagtg
ctggtgaaaagcccgtgcaacatgatgggctattacaaaaaccccgagctgaccgcagaa
agctacaccgaagacggatttctcaagaccggtgacatgggcgaaattgacgcacaaggg
cgcttgaaaatcactggccgcgtcaaggaactgttcaagaccagcaagggcaaatacata
gcacctgtgcccattgaaaaccgtttgaacggccatgaactgatcgaagccgtgtgtgtc
actggcccctcgttttcccagccttttgcattggtaatgctgccacttgaagagcacaaa
aagcttgaacaaaacccgggcgaggcaagccatgttgaaagcgaaatgactgaattgctg
gcccatgtgaacggccagctggaagcgcatgaaaggctcagttgcattgtcgtggtgaaa
gacatctggagcatggaaaacggcttcctgacccccaccatgaaaatcaagcgcaacgtg
attgaagcgaattacctgcccaaggccgaaggctgggtggccctcaaaaagcctgtggta
atcgagtcctga

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