Limnobacter thiooxidans: RGQ30_23390
Help
Entry
RGQ30_23390 CDS
T09704
Symbol
cerN
Name
(GenBank) ceramidase CerN
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00600
Sphingolipid metabolism
lto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
RGQ30_23390 (cerN)
Enzymes [BR:
lto01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
RGQ30_23390 (cerN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-ProteinID:
BET26838
UniProt:
A0AA86J0J3
LinkDB
All DBs
Position
2598675..2601137
Genome browser
AA seq
820 aa
AA seq
DB search
MHTKFKWTRRTPWTLLAVLALSGCLGNNDDTPQAGDRTNPNEGPSGGEFVDSTGLQCALS
DPNLLIGEGLDSPSVIQAITPAQTPDNSAQPSTGLNSGACQNNTDFTMGTGIADITGPAA
GSVMMGYESPTHASLGLHTRQFSRAYVLGSPCNGKRVVYVVNDLGMIFHAVRQGVLNKVA
ADAELAAFYNEQNIMLNATHTHAGPGGYAHFAAFNLFRLGHDEEVYNFIVDGIVLAIRRA
HANLQANPEPGRLWVNNGELLNANVNRSASAYDQNPQEERNRTLTQRGESQNVNKEMALL
KLRRGDGTPIGQINWFGVHPTTTGNTNPLVSSDNKGWAALAFEKIMGTRYETAPGENTFV
AAFAQTDEGDSSPNVFFKDKPFAERGGSVDELKAVEINGSKQLARALTLYRDANQMVRGG
VNFAQFHVKMDQVEVTDPVILNSLKHPETLNSAVKKTCTAAMGVSFGAGAEDGPGPTVEG
ATCNNRLDPARLTRDLAALAAGKLPPEVLAGAALCNVSALPFDVVPVGVDLACHAEKPVL
FVLGAPLNLSNDTLPFQLFTIGNVAVLGLPWEITTMAGRRIRQTVLEVLEPQGIDQVIIS
GLSNDYVNYLTTREEYSIQQYEGASVQFGPWTLAAVQQESRRLAMSLASQSQPPAGPPRT
VTSNPIPRPPYIPFDQAPGAAFGDVLAQPAPKVAAGNTVTAQFQSAHPRNMKTRGLAIVE
VEKLDANGQWQSFTHDRSPELLFRWQPFDPTPYLSPVPLPGFVSTALAEWKIPANTLAGQ
YRIRHRGVAVPAGSPQAFEGVSQAFEVTATGATCSDGRTL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccaaattcaagtggacacggcgcacgccctggactttgcttgctgtattggcc
ttgtcaggttgcctgggcaacaacgacgacacgccacaagcgggcgaccgaacgaatccc
aacgaaggtccttcaggcggtgaatttgttgattccacaggtttgcagtgcgcactcagc
gaccccaacctgctaattggcgaagggctagacagtccctcggtaatccaagccatcacg
ccagcgcaaacccctgacaattcagcccaacccagcaccggcttgaacagcggcgcctgc
cagaacaacaccgacttcaccatgggcacgggcatcgccgacatcacggggcctgccgcg
ggctcggtcatgatggggtacgaatcgccgacccacgccagcctgggtttgcacacccgc
cagttttcaagggcctatgtgctcggctcaccctgcaatggcaagcgcgtggtttacgtg
gtcaacgacctgggcatgatttttcatgctgtgcgccaaggcgtgttgaacaaggtggcc
gccgatgcagaactggccgccttttacaacgaacaaaacatcatgttgaacgccactcac
acccatgcagggcccggtggctatgcacactttgccgcattcaacctgtttcgcctgggg
catgacgaagaggtttacaacttcatcgtggatggcatcgtgttggccattcgccgcgct
catgccaatctgcaagccaatcccgaacctgggcgtttgtgggtcaacaacggggaactg
ttgaatgccaacgtgaaccgctcggccagtgcctacgatcaaaaccctcaggaagaaaga
aacaggacactgacccagcgcggtgaaagccagaatgtgaacaaggaaatggcactgctg
aaactgcgccgtggcgatggcactccgatcgggcaaatcaactggtttggtgtgcacccc
accaccacgggcaacaccaacccgctggtgtcttctgacaacaagggctgggccgccctg
gcctttgaaaaaatcatgggcacccgctatgaaaccgccccgggtgaaaacacctttgtg
gccgccttcgcccaaactgacgagggcgacagcagcccgaatgttttcttcaaagacaaa
cctttcgcagaaaggggtggttcagtggatgaattgaaggccgttgaaatcaacggcagc
aaacaattggcccgtgcactgacgctttaccgcgatgcgaaccagatggtacgcggcggc
gtgaatttcgcccagttccacgtcaaaatggaccaggttgaagtgactgacccggtgatc
ttgaattcactgaaacacccggaaacgctgaacagcgctgtcaagaaaacatgcacagct
gccatgggggtttcctttggtgcgggtgcagaagacgggccaggccccaccgtagaaggt
gccacgtgcaacaaccggctggacccagcccgcttgacccgcgacctggcagccttggct
gcgggcaagctgccccccgaggtattggctggtgccgcactttgcaatgtgagcgcattg
ccttttgatgtggtgccggtgggcgtcgacctggcctgccacgcagaaaagccggtgctg
tttgtactcggtgcaccattgaatttgagcaatgacacactgcccttccagttgttcacc
attggcaatgtggccgtactgggcctgccttgggaaatcaccaccatggcagggcgacgc
attcggcaaacagtgctggaagttctcgaaccgcaaggtattgatcaggtcatcattagt
ggcctgagcaacgactatgtgaattacctgaccactcgcgaagaatactcaattcagcag
tacgaaggcgcatcggttcaatttggcccatggacactggcggcagttcaacaggaaagc
cgacgcctggccatgtctctggcttcgcagagccaaccaccagcaggcccgccgcgcacg
gtaaccagcaacccgataccacgcccgccctacataccttttgaccaggcacccggcgca
gcatttggcgatgtactggctcaacctgcccccaaggtggcagcaggcaacaccgtcacc
gcgcagtttcaaagcgcacacccgcgcaacatgaaaacacgcgggctggccattgttgaa
gttgaaaaactggatgcaaatgggcaatggcaaagttttacccacgaccggtctccagaa
ctgctgtttcgctggcaaccgtttgatccaacaccttacctgagcccggtgcccctgccc
ggctttgtatctaccgccctggccgaatggaaaataccggccaacacacttgcaggccaa
taccggattcgacacaggggtgtggcagtgccagcaggttcacctcaagcattcgaaggg
gtaagccaagcgtttgaagtaacggccacgggggccacttgcagcgacgggagaacactg
tga
DBGET
integrated database retrieval system
