KEGG   Limnobacter thiooxidans: RGQ30_24640
Entry
RGQ30_24640       CDS       T09704                                 
Name
(GenBank) PAS domain S-box protein
  KO
K03406  methyl-accepting chemotaxis protein
Organism
lto  Limnobacter thiooxidans
Pathway
lto02020  Two-component system
lto02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:lto00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RGQ30_24640
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    RGQ30_24640
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:lto02035]
    RGQ30_24640
Bacterial motility proteins [BR:lto02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    RGQ30_24640
SSDB
Motif
Pfam: PAS_9 PAS_3 PAS_4 PAS MCPsignal PAS_8 PAS_13 Diguanyl_cycl_sensor T3SchapCesA COG6_N
Other DBs
NCBI-ProteinID: BET26963
UniProt: A0AA86J1Z7
LinkDB
Position
2734922..2737375
AA seq 817 aa
MNSQTSQFNTEPNHSARILNAVAANQACIEFDLNGNVLNANDNFLNTFGYAEDQVLGKHH
SMFCAPGTVGSDDYEHFWNTLREGGFQTGEFLRLASQGREIYIQSNYTPVRDEHGQVVSV
IEMAIDITTAKLKAMDNEGKVSAINRSQGVVEFDLTGNILHANDNFLALTGYELEEIVGQ
HHSVFVEKEERGSVTYRAFWRKLGQGEFDSGEYLRVGKQGKRIWIQASYNPILDLEGKPL
KVVKFCSDVTQTKLQSIETQARMESVSCTNCIMELDAEGRIIGSNSLMQKALGYSKVDLA
DKTESFLMFDDERSDSTYFNTWNALREGTSVSGEFRLKGVGNKEIWLSGSRSPVIGLDGQ
LIKVVVMVQDITEAKLARLDSEGKLGAIDRSQAVIEFDMTGKVLTANSNFLKLMGYAQEE
IIGRHHRLFVDPTYAATPQYQAFWESLGRGQFESGEYKRLAKGGREVWIQATYNPIYDPR
GNLVKVVKFASDVTQSKLKNSEFEAKVEAINLGQAVIEFDLDGHVLSANRNFLNAMGYTS
REIQGQHHSIFCTLEYTQSEEYRDFWLRLNEGKFISGRFHRVGKFNRDVWIQATYNPILD
LNGQVTKVVKYAYDVTKEVQLEQSINQKTELMRARLNQVIERIDLVVKDSARVAKSADQS
LESAQLGHKELKRSMAANQAIQHGAQKVAEIVRAIGDTANQTNLLAFNAAIEAARAGQHG
VGFSVVASEVRKLAENSSTAAKEIAVLIEESIAQVGESLEESDQAASKIEYIVNTLNSTS
EVMGEVMQRVESQREDAQHVIELIQALSVSTRKGQLA
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgaattcacaaacctcgcagttcaataccgagcccaatcacagcgcacgcattcttaat
gcagttgcagccaaccaggcctgcattgaatttgacttgaacggcaatgtgctcaatgcg
aatgacaattttctgaacacatttgggtatgctgaagaccaagtattgggcaagcaccac
agcatgttctgcgctcccggcactgtgggctcggatgactatgagcacttttggaatacg
ctgcgagaaggcggcttccaaaccggcgagtttcttcgcttggcctctcaaggccgtgaa
atttacatccagtccaactacacccccgttagggatgaacacgggcaggtggtgtcggtg
atcgaaatggcaattgacatcacaaccgcgaaactcaaagccatggacaacgagggcaaa
gtcagtgcaatcaaccgatcacaaggtgtggtggagttcgatctcaccgggaatatcctg
catgccaatgacaactttctggccctgacaggttatgagcttgaggagattgtgggccag
caccacagtgttttcgtggaaaaggaagagcgcggcagtgttacctacagggcgttctgg
cgcaagcttgggcaaggtgaatttgattcgggtgaatatctgcgtgttggcaaacaaggc
aaacgcatctggatccaggccagttacaacccgattcttgatctggaaggcaaaccgctc
aaggtggtgaagttttgcagcgatgtgacccaaaccaagttgcaatcgatcgaaacgcag
gcccggatggaatcagtgtcgtgcaccaattgcatcatggaactggatgctgaaggacgc
atcatcggcagcaattcactgatgcaaaaagcgcttggttacagcaaagttgaccttgcc
gacaaaaccgaaagctttttgatgttcgacgatgaacgctcggacagcacatacttcaat
acctggaatgccttgcgcgaaggcaccagcgtgtcgggtgagtttcgactcaaaggcgtg
ggcaacaaggaaatctggttgtctggatcgcgcagccccgtgataggtctggacggccaa
ctaatcaaagtcgtggtcatggtgcaagacatcacggaagccaagctggcgcggcttgat
tcggaaggaaaacttggcgcaatcgacaggtcacaggcagtgatcgagttcgacatgaca
ggcaaggtactaaccgccaacagcaatttcctgaaactgatgggatacgctcaggaagaa
atcatcggtcgtcaccaccgtctgtttgtggacccaacctatgcggccacgccacagtac
caagccttctgggaaagtttggggcgcggacagtttgaatctggcgaatacaagcgcctg
gccaaaggtgggcgagaggtgtggattcaagccacctacaacccgatttatgatccacgt
ggcaacctggtgaaggtggtcaagtttgcaagcgatgtcacgcaaagcaaactgaaaaat
tccgagtttgaagccaaagtggaggccatcaacctggggcaggctgtcatcgagtttgat
ctggacggccatgtattgagtgccaacagaaactttctcaacgccatgggttatacctcg
cgtgaaattcagggacagcatcacagcattttctgcacgctggaatacacgcagagtgaa
gagtaccgggatttctggctgcgcctgaatgaaggaaaattcatcagcgggcgctttcac
cgagtgggcaaattcaaccgtgatgtctggattcaggccacctacaacccgattctggat
ttgaacggacaggtcacaaaagttgtgaagtacgcctacgatgtgaccaaggaagtgcaa
ctagaacaaagcatcaatcaaaaaaccgaattgatgcgcgcccgattgaaccaggtcatt
gaacgcattgacctggtggtgaaagactctgcacgcgttgcaaaatcggcagaccaaagc
ctggaatctgcccaacttggccacaaggaattgaagcggtccatggctgccaaccaggcc
atacagcacggcgcacagaaagttgcggagattgtgcgcgcaattggcgataccgccaac
cagaccaacctgctcgcattcaatgcagctattgaagcggcgcgtgcgggccagcatggc
gtggggttttcagtggtggcatccgaagttcggaaacttgcagaaaacagcagtacagct
gccaaggaaatcgcagtgctgattgaagaatcgattgcacaagtaggggaaagcctggaa
gaaagtgaccaggcagccagcaagatcgagtacatcgtcaacaccttgaacagcaccagc
gaagtcatgggtgaagtcatgcagcgggttgaatcacagcgtgaagacgcgcaacatgtc
atcgaactgattcaagccttgtctgtcagcacacgcaagggccagcttgcatga

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