Limnobacter thiooxidans: RGQ30_26540
Help
Entry
RGQ30_26540 CDS
T09704
Symbol
rfaQ
Name
(GenBank) putative lipopolysaccharide heptosyltransferase III
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00540
Lipopolysaccharide biosynthesis
lto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RGQ30_26540 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lto01005
]
RGQ30_26540 (rfaQ)
Enzymes [BR:
lto01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
RGQ30_26540 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
lto01005
]
Core region
RGQ30_26540 (rfaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
BET27153
UniProt:
A0AA86J179
LinkDB
All DBs
Position
2947793..2948851
Genome browser
AA seq
352 aa
AA seq
DB search
MQKILVIKLRHHGDVLLTTALYHALHTQFPDAQVDTLIYKETTPLLQNNPHLNRVLCIDR
KLKGFTRLKAEMGLVLNVRRTGYDVVIHLTDQWVGALLARFSKAPVRVQMAYAKRDKALW
HACFTHRIVPPARGQAHAVELNLLCLEALGVNPRSLRGEMVLRPSAENLEKADQLLSTQS
IDGPFVLIHPAARWPFKCWEDKKFAAVVVHLLNSGLHVVLTCSPDPVEVAMTAEIERLAR
EKTGNAPSKLVNVGGQMSLPLLAALLKLSKFYVGVDSAPMHMAAALNVPQVALFGPSWVQ
EWRPWSDKATVIYAGDFGPLPHPDSINTDDTTRLLAAIPTEVVIQAVDQLMK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaaattctggtgatcaaattaaggcaccacggcgacgtgctgctgacaacggct
ttgtaccacgcgctgcacacgcagtttcccgacgcgcaggtggacaccctgatttacaag
gaaaccacgccactgctgcaaaataacccgcacctgaaccgggtgctgtgcatcgacagg
aaactcaaaggctttacgcgcttgaaagcggaaatgggcttggtattgaatgtaaggcgc
actggttacgatgtggtgatccatttgactgaccaatgggttggcgcactgctggcccgt
ttttcaaaagcgcccgtgcgggttcaaatggcgtatgccaagcgcgacaaagccctgtgg
cacgcctgctttacccaccgcatcgtacctcctgcacgcggacaagcacacgctgtggag
cttaacttgctgtgcctggaagctttgggtgtgaacccgcgcagcctgcgcggtgaaatg
gtgttgcgtccgagtgccgagaatctggaaaaggcggatcaactgttgagcacccaaagc
attgacgggccttttgtactgatacacccggcggcccgctggcccttcaaatgttgggaa
gacaaaaaatttgccgccgtggttgtgcacctgttgaacagcggtttgcatgtggtgctg
acttgcagccccgaccccgtggaagtggccatgacagctgaaatcgagcgactggcccgt
gaaaaaacaggtaacgcccccagcaaactggtgaatgtgggtggccaaatgagcttgccc
ctgctggccgccttgttgaagttgagcaagttttatgtgggtgtggattctgcacccatg
cacatggcggcagcattgaatgtgccccaggtggccttgtttggcccatcgtgggttcag
gaatggcgaccttggtctgacaaggccacggtgatttatgcgggcgacttcggcccactt
ccccaccccgacagcatcaacaccgacgacaccacccgtttattggcagccattcccacc
gaggtggtcattcaggctgtggaccagttgatgaaataa
DBGET
integrated database retrieval system
