Limnobacter thiooxidans: RGQ30_27080
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Entry
RGQ30_27080 CDS
T09704
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lto03000
]
RGQ30_27080
Transcription factors [BR:
lto03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RGQ30_27080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
BET27207
UniProt:
A0AA86MJ92
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All DBs
Position
complement(3004920..3005831)
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AA seq
303 aa
AA seq
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METKWLEDFITLAQTKNFSKAANLRCVTQPAFSRRIQALEGWLGCELIDRGSYPTRLSAQ
GEVFYEQALAMLEQIRQARTIVRGGSLQSRHPIRLVVPHTLACSKAPYWISTLKAKLADR
LPDLSFQLTASNVHDAVLYFTDGASDFLVCYHHSREPIELDPGKFEFRLLGVERFAPYTA
KDAFGKPLYALDPLAPLPVPFLSYSKHAYLSKMTDMAFEAGPVFLKKTLYETDMSESLKS
LCQAGLGVAWLPESAVSGDSGLCCITGPYFIDMEVRLYRRSQRNRELNAGNEQADLAWHY
WPD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaatggcttgaagacttcatcaccctggcccaaaccaagaacttttcgaaa
gcggccaacttgagatgcgtgacccagcctgctttctcgcgtcgaattcaggcgcttgag
ggctggcttggctgcgagttgattgaccggggttcataccccacgagactcagcgcccag
ggagaagtgttttatgaacaggccctcgccatgcttgagcaaattcgccaagcccgcacc
attgtgcggggcggcagccttcaaagccgacacccgatccgcttggttgtacctcatacg
ctggcttgcagcaaggccccttactggatcagtacactaaaggccaagctggccgatcgg
ttacccgatctcagttttcaattgactgcaagcaacgtgcacgatgcagtactttacttc
accgacggagcaagcgattttctggtgtgttatcaccacagtcgagagcctattgagttg
gacccgggcaaattcgagtttcgtcttttgggcgtggagcgttttgcgccttacacggca
aaagatgccttcggcaagccgctttatgcacttgatcccctcgcaccattgcccgtgcct
tttctgtcctattccaagcacgcttacttgtccaagatgactgacatggcttttgaagca
ggtccggtgtttctgaaaaaaacactgtacgaaaccgatatgtcagaaagcctgaagtcc
ctgtgccaggctgggctaggggtggcgtggttgccggaaagtgcggtgtctggtgattcc
ggtctgtgttgcatcaccggaccttacttcatcgacatggaagtacgcctgtaccgccgc
agtcaacgcaaccgagagcttaacgctggcaatgagcaggccgatctggcttggcactat
tggcctgattag
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