Limnobacter thiooxidans: RGQ30_27130
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Entry
RGQ30_27130 CDS
T09704
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lto03000
]
RGQ30_27130
Transcription factors [BR:
lto03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RGQ30_27130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_Crp_2
MarR_2
HTH_11
Rrf2
MarR
TrmB
HTH_IclR
HTH_24
HTH_36
Motif
Other DBs
NCBI-ProteinID:
BET27212
UniProt:
A0AA86J0B8
LinkDB
All DBs
Position
complement(3009592..3010467)
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AA seq
291 aa
AA seq
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MDSQFPSALHEESNFGDSKLDPNQVVPLYHQIYLILRERIIEGHYDTKPLPGELVLAEQF
NVSRVTMRRALQDLVKEGLVARGRGKGTFVKPRTESRNSSVGQSQLLSASAMRLQASGDS
SDLQLITSKRILPPPDIATLLHLPSDAIVEKLIRIRQIEGQPVAHLTSFIPQDLSGRICR
RRLREFPILVLLEEAGVKVAKARQTISARLADASVAYALGVPVGAPLLAISRVAYDENGR
PVQVLKGLYRPDRYDYRIELSRKQAKGQSSWQHVNEVEFAFEMHQQDLSHF
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcagtttccctccgcacttcacgaagaatcgaacttcggggacagtaaattg
gaccccaatcaggtcgtgcctctttatcaccagatctacctgattcttcgcgaacgcatt
attgagggacactacgacaccaagcccttgccaggtgagctggtgcttgcagaacaattc
aatgtgtcccgggtcaccatgcgtcgggccctgcaagacctggtgaaggaaggtttggtg
gcaaggggccgtggcaagggtacttttgtcaaaccccgcactgagtcacgcaattcctcc
gttggccaaagccagttgctcagtgcttctgccatgcgtctgcaagccagtggcgactct
tccgatctccagctgatcacctccaaacgcattcttcctccacctgacattgcaaccctg
ctgcatttgcccagcgacgccattgtggaaaaactgatccgtattcgtcagattgaagga
cagccggttgcccacctgaccagtttcataccgcaggatttgtctggccgtatttgtcgc
aggcgcttgcgagaatttccgatattggttttgctggaagaggctggggtgaaagtggcc
aaggctcgtcaaaccatctcggcgcgcctggccgatgcatcggttgcctatgctttgggt
gtacccgtcggcgcgcccctgttggccatttcacgcgtggcttacgatgaaaacggcagg
ccggtgcaggtactgaaaggtttgtatcgccccgaccggtatgactaccggatcgaactg
tcgcgaaaacaggccaaggggcaaagttcctggcagcacgtgaacgaggttgagtttgcg
ttcgagatgcaccagcaggacctcagtcacttctag
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