KEGG   Limnobacter thiooxidans: RGQ30_27720
Entry
RGQ30_27720       CDS       T09704                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lto  Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:lto00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lto02048]
    RGQ30_27720
Enzymes [BR:lto01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RGQ30_27720
Prokaryotic defense system [BR:lto02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RGQ30_27720
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD Perilipin_2 SNF2-rel_dom
Other DBs
NCBI-ProteinID: BET27271
UniProt: A0AA86J3V3
LinkDB
Position
3079951..3083037
AA seq 1028 aa
MSNIHKELHFEKEICAQLKAQGWLHSEGDAGYDAEKALFPEDLLWWVQETQPQAWAKIKA
MHNGQSEKKLLERVVKVLQADGTLSVVRHGFKDVSSGRISLCQFKPATSLNPATLADYGK
VRLRVMQQVHYSLHNRNSIDLVFFVNGIPVATMELKTDFTQTIDDAVKQYKFDRPPKDPV
SKAEEPLLAFKRGALVHFAVSTEEVQMTTKLEGPGTTFLPFNLGNNGGKGNPDNPNGFKT
EYLWEKVLHRDSFLDIIGRFVHLQRKDSVDKKTGKKVTKLSMIFPRFHQLEGVTQLIAAA
KVEGPGNKYLIQHSAGSGKTNTISWTAHQLASLHDAANKKVFDSVIVVTDRTVLDDQLQD
AIYQFEHKHGVVACIKSQPGDSKSAQLAQALKDKTPVIIVTIQTFPFVVDALADVTLKGR
SYAIIADEAHTSQTGSAAKKVKSILSPAEQAELEDGGDLDIEALLAAEMAARAQPKNISY
FAFTATPKSKTMELFGRVGASGKPEPFHVYTMQQAIEEGFILDVLKNYTPYKVAFKIAHN
GQDYDSETVNKSEALKSLMNWVRLHPYNIAQKVAVIVEHFKTNVAWRLGGKAKAMVVTGS
RKEAVRYKVAIDKYITDKAAQDPSYKALQAMVAFSGQVIDPDTGPGEFTETNMNPGLNGR
EMREAFAEDEYQVMIVANKYQTGFDQPLLVSMYVDKKLSGVAAVQTLSRLNRTHPGKDVT
FVIDFVNKPDEILEAFVPYFKTAALSDVSDPNVIHDLQSKLDAALIYTAQEVDYLVKVYF
NKPTQAAVSKCLQPAQSRFRDGLKAAIAANDLPEIERLEGFKKDVITFVRIYDFLSQIIN
YDDSELEKRSIFLKLLSRLLKSSVDLETIDLSDVELTHYQLRSKGLQNIPLTKADPKALD
PAFTDLGTTKPPKNDEEALFAEIIERVNKLFEGDQLTDADAVAVFNHVAGKMLENENLME
QAKANSEQQFGASPDFKKVLEEAVVACFENHQSMTKQILTNDRIRESFAELLLPFVYGKL
KVDNRPST
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgtcaaacattcataaagaactgcacttcgaaaaagagatttgcgctcagctaaaagca
cagggctggctgcactccgagggagatgcaggctacgacgctgaaaaagctcttttccca
gaagacttgctgtggtgggtacaagaaacccaaccccaagcgtgggccaaaatcaaagcc
atgcacaatggccagtcggaaaagaagctgctcgaacgtgtggtgaaggtccttcaagca
gatggcaccttgtctgtggttcgccatgggttcaaggacgtgtcctctggtcgcatttct
ttgtgtcagttcaagcctgcaacatcgctgaaccctgccacgcttgcagactacggcaag
gtgcgcctgcgggtcatgcagcaggttcattattccctgcacaatcgtaattccatcgac
ctggtgttctttgttaacggcatacccgtggccaccatggagttgaaaactgacttcacg
caaaccattgatgatgcagtaaagcagtacaagtttgaccggccgccgaaagacccagta
agcaaagctgaggaacccctcttggcctttaagcgcggcgcattggtccacttcgctgta
agcactgaagaagtgcaaatgaccaccaagctagaaggccccggaaccaccttcctgcct
tttaacctgggcaacaacggtggcaaaggaaacccggacaatccaaacggattcaaaact
gaatacctctgggaaaaggtgctccatcgcgacagcttcttggacatcattggtcgcttc
gttcacttgcagcgcaaagacagcgtggacaagaaaacaggaaagaaggtcaccaagctg
tccatgattttcccgcgctttcatcagcttgaaggcgtgacccaattgattgccgctgcc
aaggttgaaggtccgggaaacaagtacctcattcagcattctgccggctctggcaagacc
aacactatttcgtggactgcccaccagttggcaagcctgcatgacgcggccaacaaaaag
gtcttcgatagtgtgattgtggtcactgaccgcacggtgctggatgaccagttacaagat
gccatttatcagtttgagcacaagcacggggttgtggcctgcatcaagtcgcagccgggt
gactcaaagtctgcgcaattggcacaggccttgaaagacaaaacgcctgtcatcatcgtg
accattcagactttccccttcgtggtggatgcattggcagatgtgacactgaaaggtcgg
tcctacgccatcattgcagatgaggcgcacacctctcaaacaggcagtgcagccaagaaa
gttaaatccatcttgtcgccggccgaacaggcggagctggaagacggcggggacttggac
attgaagcgctgttggctgccgaaatggctgcccgggcccaacccaaaaacatcagttat
tttgcgttcacggccactccgaaatccaaaaccatggagttgttcggacgtgttggcgca
tctggcaagcccgaacccttccatgtgtacaccatgcagcaggccattgaagaaggcttc
attctggatgtactcaagaactacacgccctacaaagtagccttcaagattgctcacaac
ggccaagattacgacagcgaaacggtgaacaaatctgaggccctgaagagccttatgaat
tgggttcgcctgcacccctacaacatcgcccaaaaagtggcggtgattgtagagcacttc
aagaccaacgttgcgtggcgacttggtggcaaagccaaggcaatggttgttactggctcg
cgcaaagaagctgttcgttacaaagtggccattgacaagtacatcactgataaggcggct
caagaccccagctacaaagcattgcaggcgatggttgccttttctggtcaagtgattgac
ccagataccggcccaggcgagttcaccgaaacgaacatgaacccagggctgaacggccgc
gagatgcgagaggcttttgctgaagacgaataccaagtgatgattgttgctaacaagtac
cagacaggctttgaccagccgctgctcgtctccatgtatgtggataaaaagctgtcaggt
gttgctgctgtgcaaaccctctctcgcctgaatcgtacccaccctggcaaggatgtgact
tttgttatcgattttgtaaacaagccagatgagattcttgaggcgttcgtgccgtatttc
aagacagctgcgctttcggacgtctccgacccgaacgtgattcatgacctgcaatccaag
ctggatgccgctctgatttataccgcgcaggaagtcgactacctcgtgaaggtgtatttc
aacaaaccaactcaggcagcagtaagcaaatgcttgcagccggctcaaagcagattccga
gatggactgaaagcagcaattgcagccaatgatttgcctgaaatcgaaaggttggaagga
ttcaagaaagatgtcattacgtttgtgcgcatctatgacttcttgtctcaaatcatcaac
tacgacgacagtgagttagaaaagagaagcatctttttgaagcttctaagccgcttgctc
aagtcgtcagtggatttggaaacaatcgacctttccgatgtggagttgactcactatcaa
ctgcgtagcaagggtcttcagaacatccccttgaccaaggcagaccccaaggcattggac
ccggctttcactgacctgggaaccactaagccgcccaagaatgatgaagaggcgcttttt
gcagaaatcatcgaacgagttaacaagctattcgaaggtgaccagctcaccgatgccgat
gccgtggctgtgttcaatcatgtggcaggcaagatgcttgagaacgaaaacctgatggag
caggccaaggccaactcggagcagcagtttggagcaagccctgatttcaagaaagtgtta
gaagaagcagtagtggcgtgctttgagaatcaccaatctatgaccaagcaaattctgacc
aatgaccggatacgggagtcgtttgcggagctgttattgccgtttgtttatgggaagcta
aaagttgataatcgaccttcgacttaa

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