Limnobacter thiooxidans: RGQ30_29280
Help
Entry
RGQ30_29280 CDS
T09704
Symbol
rlhA
Name
(GenBank) 23S rRNA 5-hydroxycytidine C2501 synthase
KO
K24847
23S rRNA 5-hydroxycytidine C2501 synthase
Organism
lto
Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lto01002
]
RGQ30_29280 (rlhA)
Peptidases and inhibitors [BR:
lto01002
]
Peptidases of unknown catalytic type
Family U32
RGQ30_29280 (rlhA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_U32
DUF3656
TMEM160
DUF7916
DUF6950
Motif
Other DBs
NCBI-ProteinID:
BET27427
UniProt:
A0AA86JMH5
LinkDB
All DBs
Position
complement(3241598..3243604)
Genome browser
AA seq
668 aa
AA seq
DB search
MSENASEIMSLLPHELELLAPARDVEIGRQAILHGADAVYLGGPTFGARANAANSVADIA
KLVQFAHRYHARIFTTINTILHDAELEEARKLVWQLYDAGVDALIIQDMGLLEMDLPPIQ
LHASTQCDIRTVEKAKFLADSGFSQLVLARELTVKEIAAVHAAVGDSATIEYFIHGALCV
AFSGQCYISHAETGRSANRGDCSQACRLPYTLTDQSGAVVAFDKHLLSMKDNNQSGNLEH
LIDAGVRSFKIEGRYKDMAYVKNITSHYRILLDEIMEQRGEFTRASSGQTRHYFRPDPDR
NFHRGATDYFASGRKIDIGAFDSPKFIGQPVGHVVAVNDKSIDIQTSDELNNGDGLNFMR
KREVVGLHVNRAEKLHSKGEGQAVYRVFPKDPIASYGGLKAGLPMHRNRDHAWDMALAKD
SAERRIGLWLTLTEWMEGDLLKGLQLSLTDEDGVAALSQVEMPLELAKQADTAVDSIKTH
MAKLGGTDFSALGLNVHLSQPWFVPASVLNGMRREAIEALNVARVNAWQRPPRKEPVQPY
VDYPEKSLSFLANVYNDKAREFYRKHGVEMIAAAYEAHEEAGEVPVMITKHCLRFSFNLC
PKQAKGVAGVQGQVKAEPMVLVNGDQKYTLKFDCKPCEMHIMGKMRKDIFNSPPPSVVPI
TFMKRKPL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaaaatgccagtgaaatcatgagtttgttgccacacgagttggaattgcttgcc
cctgcacgcgacgtagagattggtcgccaggcgattttgcacggtgcagacgcggtttac
ctgggtgggcccacctttggcgcacgcgccaacgcggccaattctgtggcggatatcgcg
aagctggttcagtttgcccaccgctatcacgcccgcattttcacgaccatcaacacgatt
ttgcacgacgccgagctggaagaagcgcgcaaactggtttggcagttgtacgacgccggc
gtggatgccctgatcattcaggacatgggcttgctggaaatggacttgccgcccatccag
ctgcatgccagcacccagtgcgacattcgcactgtggaaaaagcgaaattcctggcggac
agcggtttttcacagctggtgctggcccgtgaactgacggtgaaagaaattgcggccgtg
catgcggcggtaggcgattcagccaccattgaatactttatacatggagccttgtgcgtg
gccttttcgggccagtgttacatcagccatgctgaaacaggccgaagtgccaaccgcggc
gattgttcacaggcttgccgcctgccttataccctgaccgaccaaagcggtgctgtggtg
gcttttgacaagcatttgttgtcgatgaaagacaacaaccagagcggcaacctggagcac
ctgattgatgcgggggtacgttccttcaagattgaagggcgctacaaggacatggcctat
gtgaagaacatcacgtcccactaccgcattttgctggacgaaatcatggagcagcgtggc
gagtttacccgcgcatccagtgggcaaacccggcattatttccgccctgaccctgatcgg
aattttcaccggggtgccaccgattactttgccagtggacgaaaaatcgacattggtgcc
ttcgattcgcccaaattcatcgggcagcctgtgggccacgtggtcgccgtgaatgacaag
agcatcgacatccaaaccagtgatgagttgaacaatggcgatggcctcaacttcatgcgc
aagcgcgaagtggtgggtttgcatgtgaaccgtgctgaaaagttgcacagcaagggagaa
ggccaggccgtgtaccgcgtattccccaaagacccgattgccagctacgggggtctgaaa
gccgggttgccgatgcaccgcaaccgtgatcatgcctgggacatggccttggccaaagac
agtgccgagcgacgaatcggtttgtggctgaccctgaccgagtggatggaaggcgacctg
ttgaaaggcctgcagttgagcctgaccgatgaagatggcgttgccgctttgtctcaggta
gaaatgcccttggagctggccaagcaggcagacaccgcagtggacagcataaaaacccac
atggccaagctgggcggaactgatttctcggctttgggcctgaatgttcatttaagccag
ccctggtttgtacccgccagtgttctcaatggcatgcgccgcgaggccattgaagccttg
aacgtggcccgtgtgaacgcctggcaacgcccaccacgcaaggagcctgtgcagccctat
gtggactacccagaaaagtcattgagctttttggccaacgtctacaacgacaaggcgcgc
gagttttatcgcaagcatggcgtggaaatgattgctgctgcgtatgaggcacatgaagag
gcgggcgaagtgcctgtcatgatcaccaagcattgtctgcgattttcgtttaatttgtgc
ccaaagcaagccaaaggggtggcaggggttcaggggcaggtgaaggccgaaccgatggtg
ctggtcaatggggatcaaaagtacaccctgaagttcgattgcaaaccctgcgaaatgcac
atcatgggtaaaatgcgcaaagacatattcaacagcccgcccccgtcggtggtacccatc
acgttcatgaagcgcaaaccgctttga
DBGET
integrated database retrieval system
