Limnobacter thiooxidans: RGQ30_29370
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Entry
RGQ30_29370 CDS
T09704
Name
(GenBank) hypothetical protein
Organism
lto
Limnobacter thiooxidans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5649
TPS
Motif
Other DBs
NCBI-ProteinID:
BET27436
UniProt:
A0AA86J488
LinkDB
All DBs
Position
complement(3250514..3256072)
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AA seq
1852 aa
AA seq
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MYTPAITPHCSFVLKPLAAAVLVVCASGVHAAPSFNGSPGGNVTVETSGSTTTVTQSVTA
SNRALANWDDFSIAGNESVVFEQPNSNSVILNRVLGSHPSEIFGRLSANGRVFLINPNGI
VFGANSEVNVSGLVASTLTLKPGSQNNSDLIEFELTDSGGTITSNGTINAKDIAFLSTDI
ENNGILNASGAGAAVHLIAASEVTANTSGNDLVLNVLAGHENAVINQLGGVFAQGGKIVL
IAQSQTGGQASVINTANIARASQIVIEGDVVRLTGDINLSDVESRLQVTAQTIQQDDLLR
AGGAVALQADTVNLDDAGNDFTGTVSLDVNNQATLQDVNALVVQGNSGAATFSAVDLSMG
SLNADSLAVNAQTVTQTGALEVGGTTQLNAEAVTLTNASNRFQGTVNATVGNQLSLRTDQ
DLAVSGNVGNATLQAENIALNGLQATGDVVLSASGSITQGGDVSNALAIGGATQIENASV
VRLDNSMNDFEGAVSLNGAGSVALADQNSLTVQGTAGDLALRASTGPAGQVTLGQLKAES
LNVSANRIGQSGVVAVGNSATLAAAQLELLNAGNDFQGQVNLSVSGPTSLRDSNQLQVAG
AVNSAEIQASEVTINGLTAAGNLTLQGGSINQSGALSVAGSTTLVGGEVNLDNSGNNFNG
VVNVNSTSTARIDVAGDLELLGSAQSLTAFSTGTLRVSSLDSGNIELTANQIELQNFAAR
GDLKLNGGSVSQQGALTVEGNTRLGASTVSLQDAGNDFKGVVDLDSAGNVSLRDANGLRL
QGRASSINAQAAGSIDQSAALNIAGASEFAATTIALNSAGNTFGGDVALNATDAANLSAQ
GNLTVGGQAKSLTASASETLRFAATQTETLVASGRQVNQAGILRVASSTTVSGGSVNLNN
AENDFGGSLALNVSGNVTVRDANDLLLTGRAETVNVQVGNTLTLGGVQVESGNFSADTIA
LNRLNVQDSARLQASVITQTEAAEASGRLNLVANTVSLTDTGNDFSGELRVNSATAHIVD
SNDLTMTFAGDNLTAQAANLNVNEMRATGDVLVTADNATIVSSGDLSLQGQVGTLNVQAR
NLSQRDALRVRGAARLSAENVALRHQANDFQGEVVLNVAGNAVLNDQDSLEISGRVQGAA
QFSAESLGQSNALVTESDLLLQASQINLSNEANSLGGASGNPSSGLSGHAVQLEGVTQAV
LTSQGNLKIQGAVDSLTIAAQTVELGPLGSLQDLNVVANGVRQSAALRVEGQSDFTANQI
ELRNTSNDFVGLVNIQARDADLSRVALADSNSLVVQGKNMQFAAQVQGDLNLQADNLLLS
NTVVQGSTTVNVEGELTQNQSIAVNNATLAADKITLNHSDNRFDGLTQVQSDKLIELGSA
SDLNLDAMGSTGVLALNVQGGAAVTGGNVMFANSVFNKDLNVTANDVSQTGRLMVQGDAQ
VNATGGSVNLQNVNNQFAQTVSVNADRTNVSAQGDLRIKDLVTRGGAITADGRLILQGQI
EQTGGTLSFTANGIPRPLSSAEIALMLPPELDVFSAKEAVDPLTGLGRITLASAAIQQVS
GQIVTSVDSTTQFKATQNGSVVLAPVNQGSVNQLNGQFEALAGQNHGQAFVYQQEQGASL
FAVNNDVQLRVAGKGVESDVVAIRSRGLATVGGESQLRARMPYNDSGAGTSRSYAGLTLS
IPLSNPQQGSTSIASFGESSGVGQQAASVGAIRVEVGELNQVGLGGFVTILPFEGSNLLP
GQVVYLAGPERRGTYAFFYDGARNLNRIPVVYNGALLLSPQENAALTTAQGAVVLARQEQ
TRSVVRTENVAGKIINGVVAEVGPGRPATEGEGGAGKPDSCDAAGDGLTCKL
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgtacacccccgctattacgccccattgttcatttgtcctgaaaccgcttgccgcggct
gtgctcgtggtttgtgcatcaggtgtgcatgcggcaccgagttttaacggttcaccgggt
ggcaatgtcacggtggaaaccagtggttccaccacaacagtgacccagtcggtcactgca
agcaatcgtgcgctggccaactgggatgatttttcaattgcaggcaatgaatcggtggtt
tttgagcagcccaactcaaactcggtgattttgaatcgggtgttgggcagccacccgtct
gaaatctttggccgcttgagcgccaacggacgagtgttcctgattaatcccaatggcatt
gtgttcggtgcaaactcggaagtgaatgtcagtgggctggtggcttctactttgaccctc
aagccgggctctcaaaacaacagcgatctcatcgagtttgagctcacggacagcggcggc
accattaccagcaacggcacaatcaatgccaaggacattgcctttctttccacggacatt
gagaacaacggcattttgaatgccagtggcgcaggcgcggctgtccatctgattgcagcc
agtgaggtgacggccaatacatcgggcaatgacctggttttgaatgtgctggctggccat
gaaaacgcggtgatcaaccagctgggcggggtgtttgcacagggcggaaaaattgtgttg
attgcccagtcccaaacgggtggtcaagccagtgtcatcaacacggcgaacattgctcgt
gcgtcacaaattgtaatcgaaggtgatgtggttcgcttgaccggcgacatcaatctttct
gacgttgaaagcaggctgcaagtgacagcacaaaccattcagcaagacgatttgttgcgc
gctggaggtgcggtggcgcttcaagccgacaccgtgaatctggatgatgccggaaacgac
tttacaggcaccgtcagtctggatgtaaacaatcaggcgacactgcaagatgtgaatgca
ctggttgttcaaggaaattctggcgctgcaaccttcagtgcagttgatctgtcgatgggc
agcctgaatgcagacagcttggcagtcaatgcccaaaccgtcacccagacgggcgcgctg
gaagttggcggtacaacccaactgaatgcggaagcagtcacactgacgaatgcttccaac
cgttttcagggaacagtgaatgccactgtgggtaatcaactcagcttgcgcactgatcaa
gatcttgctgtgtcaggcaatgtcggaaatgccacgctacaagcagaaaatattgcattg
aatggtttgcaagccacgggcgatgtcgtgttatcagccagcggttcaattactcagggt
ggggatgtgtcaaacgcgctggcaattggcggtgctacgcaaattgaaaacgcttcggtt
gttcgtctggacaattcaatgaacgactttgaaggggcggtgagtctgaacggtgcaggc
tcagtggcgttggcggaccagaacagtttgactgtacagggtacggcaggcgatctggcc
ttgcgtgcaagcacagggccagccggccaggtcaccttggggcaactcaaagctgaaagt
ttgaatgtcagcgccaaccgcattgggcagtctggtgtagtagcagttggaaattctgcg
accctggctgccgcgcaacttgaattgctaaatgcaggaaatgattttcaaggccaggtg
aatctgagtgtgagcgggccaaccagtttgcgagactccaatcagttgcaagtagcaggt
gctgtcaattcggctgaaattcaggcttcggaagtaaccatcaacgggttgacagcagca
ggcaatctgactttgcagggtggcagcatcaaccagtctggggcattgtcggtggcgggt
tcaaccacccttgtcggtggtgaagtcaatctcgacaattcaggcaacaatttcaacggt
gtcgtgaatgtcaattcaaccagcacggcaagaattgatgtcgccggtgacctggagttg
cttggttcggcccaatcgttgaccgcgttcagtacaggtaccttgcgcgtgtccagtctg
gattccgggaacattgaattgactgcaaaccagatagagctgcagaattttgcagcgcga
ggcgatttgaagttgaatgggggcagcgtcagccagcaaggcgcgttgacagtggaaggg
aacacccgcctgggtgccagcacagtaagcctgcaagatgccggcaatgatttcaagggt
gtggttgatctggattcagcaggcaatgtgtcacttcgtgatgcaaacggattgcgattg
caggggcgggcgagcagtatcaatgcccaagctgccggttcgattgatcagtcagctgcg
ctgaatattgccggcgcaagtgaatttgcagccacaacaattgccttgaattcggcaggg
aacacgttcgggggtgacgtggctttgaatgccacagacgcggccaacctgagcgcccaa
ggcaacctgactgtaggtgggcaggctaaaagcctgacagcctctgcaagtgaaacgcta
cgctttgcggccacacagacagaaaccctggttgcgtctggcaggcaggtgaatcaggcg
gggatcttgcgcgtggcttcaagtaccacggtgagtggtggcagtgtgaatttgaacaac
gcggaaaatgatttcggtggttcgcttgccctgaatgtcagtggcaacgtaaccgttcgt
gatgccaatgacctgctgctcacagggcgggcggaaacggtcaatgttcaggtcggcaac
actttaacgcttggcggtgtacaggttgaaagcggtaatttcagtgcagacaccattgca
ctgaaccggttgaatgttcaggattccgcccgcttgcaagcttcggtgattactcaaacc
gaggctgccgaagcttcaggtcggttgaatctggttgcaaacacggtgagtctgactgat
acaggcaacgacttttccggtgaattgcgcgtgaactcagccaccgcacacattgtcgat
tccaatgatttgacgatgaccttcgcaggagacaacctgacggcgcaagcggcaaacttg
aatgtcaatgaaatgcgcgccacgggtgatgtgcttgtaacggcagacaacgcaactatc
gtgtcttcaggcgatttgtcactgcaaggccaggtgggaacattgaatgttcaggcccgc
aacttgtcgcaaagggatgcattgcgggttcgcggggcggcacgcctgagcgccgagaat
gtggcacttcgccaccaggccaacgactttcaaggcgaagtggtgctgaatgttgcaggc
aacgccgtgttgaatgatcaagattcattggaaatttcgggccgggttcaaggtgccgca
cagttttctgccgagtctttggggcaaagcaatgccttggtcacagaatccgatttgttg
cttcaagccagtcaaatcaatctgagcaacgaagcgaattctctcggtggagcatcaggc
aatccatcaagcggcctgtcgggccatgctgtgcaacttgaaggcgtcacgcaggcggtt
ttgacaagccagggcaatctgaaaattcaaggtgcagttgattccctcaccattgctgca
caaaccgtggagttagggcccttgggttcgcttcaggatctgaatgttgtcgccaatggt
gtgcgccaaagcgctgcccttcgggttgaggggcaaagcgatttcacagcaaaccaaata
gaactgcgcaacacatccaatgattttgtcggtttggtgaatattcaggcacgtgatgcg
gatttatcccgtgttgctttggccgattcaaattcattggttgttcaagggaaaaacatg
cagtttgcagcacaggtacagggtgacctgaacctgcaggctgacaatttgttgctgagt
aacaccgttgtgcagggttccaccactgtgaacgtggagggggagttgacccaaaatcag
tccatcgcagtgaataacgcaactttggctgcggacaaaattaccttgaaccattcggat
aaccgattcgatggtttgacgcaggttcagtcagacaagctgattgaattgggcagtgcc
tctgacctgaatctggatgcaatgggctcgactggtgtacttgcattgaacgtgcaaggc
ggcgcagcagtcacgggtggcaatgtaatgtttgctaattcagtgttcaacaaggacctc
aatgtcacggccaatgatgtgtcgcaaaccgggcgtttgatggttcagggtgacgcccag
gtcaacgcaacaggcggctctgtcaacttgcaaaacgtgaacaatcagtttgcacaaaca
gtgagtgtgaatgcagaccgaaccaatgtgtcggcacaaggcgacctgcgtatcaaggac
ctcgtcacccgaggtggcgccattaccgcggatggtcgtttgattttacaagggcaaatt
gaacaaaccggcggaactttgagtttcaccgcgaatggaattccccgtcccttgtcgtct
gcggaaatagccctgatgttaccgcctgaattggatgtgttttctgcgaaagaagccgtg
gaccccttgactggcttgggccgtattaccctggccagcgcggcgattcagcaggtgtcg
gggcaaattgtcacttcggttgactccacgacacagttcaaagccacgcaaaatggctcc
gtggtgcttgccccagtcaatcaaggcagcgtcaaccagctcaacggccagttcgaagct
ttggcgggacagaaccatgggcaggcatttgtttaccagcaggaacaaggtgccagtttg
ttcgctgtcaacaacgatgtgcagttgcgtgtggctggcaaaggagttgaaagtgacgtc
gtggcaattcgttcacggggattggcaacagtaggtggcgagtcccaactgcgtgcccgc
atgccctacaacgactctggggcgggtacctcgaggtcttatgccggtttgaccttgtcg
atcccgctgagcaacccgcagcaaggttcaacgagcattgcttcttttggtgaatcgtcg
ggcgttgggcaacaggctgcttcggtgggggcgatccgagtcgaagtgggtgaactgaat
caggttggtttgggtggctttgtcacgattttgccttttgagggcagtaatttgctgcct
gggcaagtggtatatctggctggcccagagcgtcgcggtacttacgcctttttctacgat
ggggcacgtaacctgaaccgcatcccagtggtttacaacggggcattgttgttgtctccg
caggaaaacgcagcattgaccacagcgcagggggcggtggtactggcccgacaggagcag
acccggtctgtggtgcgcaccgagaatgtggcaggaaaaattatcaatggcgtggtggcc
gaggtggggccgggtcgccccgccacggaaggggagggcggagcaggcaagccggattct
tgcgatgcagcgggggatggactgacttgtaaactttga
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