KEGG   Limnobacter thiooxidans: RGQ30_30620
Entry
RGQ30_30620       CDS       T09704                                 
Symbol
sctV
Name
(GenBank) type III secretion system export apparatus subunit SctV
  KO
K03230  type III secretion protein V
Organism
lto  Limnobacter thiooxidans
Pathway
lto03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lto00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RGQ30_30620 (sctV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lto02044]
    RGQ30_30620 (sctV)
Secretion system [BR:lto02044]
 Type III secretion system
  Type III secretion core apparatus
   RGQ30_30620 (sctV)
SSDB
Motif
Pfam: FHIPEP TP_0564_2nd DUF4547 MRX12_N HTH_psq
Other DBs
NCBI-ProteinID: BET27561
UniProt: A0AA86JI49
LinkDB
Position
complement(3379657..3381753)
AA seq 698 aa
MIETINKFARLASARSEVVGASLVILMVVMMVLPLSPMMLDILLAVNISIAILLAISAVL
IETPLAFSSFPAILLMTTLFRLSLTISTTRQILLEADAGHIVQTFGEFVVGGNIAVGLTI
FIIISVVNFLVVTKGSERVAEVAARFSLDGMPGKQMSIDSDLRSGLINQSMAKQKRANLE
KESQLFGAMDGAIKFVKNDAIAGLVITGVNLLGGLAVGMLQKDMSFSQAANIYSILSVGD
GLVAIIPSLLISVAAGLIVTRVTKGEEEGSSTASDMFKDLSRNSNALQISGVFCLLFAFV
PGMPAPVFVITSLAFFTGWYFMSGRDEKPKEINIEQQFTDLMGPDHRKALEDVTTTDTYA
PLQIRVPEDVEPTVINQIQNICRIARNRQVEQLGIVLPLFDLTRHREAYAEVYVFGVPAL
SLNLSEKRMSILEPTEKIQNVDAQIEFAVEKDKTTGRYHHLCEPTFKPRLDQHGLVYKTY
ESRLLEQVEILLVSRIHQMFTLNEYQRHLVSLGDRFAEQLKELERVLPTTKVVEVLQKLM
RERVSIKNLRTIFNSLIEWGQRERDVDVITEQVRRSLHEQICHQYSQSKTMRILLLDVEF
EQIIRESVRSQGSNSYLDIDSSSINEMVAMIEQQMGPYLHEDLPPAIVCSMDCRIHIRQM
IERSLFCIPVLSHQEVSSNLEIQVLGNIAITELHSSNR
NT seq 2097 nt   +upstreamnt  +downstreamnt
gtgatagaaacaatcaataaatttgcgcgcctcgcttctgcgcgatctgaagttgtgggt
gcatcactggtcatcttgatggtcgtgatgatggttctgccactctcacccatgatgctg
gatattctgctggcagttaacatttccatcgcaatcctgttggccattagtgcggtgttg
attgaaacccctttggctttttcctcatttccagccattctgctcatgacaacgctgttc
cggttgtccttgaccatctcgaccacacgtcaaattctgcttgaggccgacgctggccac
attgttcagacctttggcgaattcgtggtgggtggaaatatcgcggtaggtctgaccatt
ttcatcatcatctcggtggtgaattttctggtggtaaccaaaggctctgaacgtgtcgct
gaagtggcagcacgtttttcacttgacggcatgccgggcaaacaaatgtccattgacagc
gacctcaggtctggtttgatcaatcaaagcatggccaaacaaaagcgtgcaaaccttgag
aaagagtcccagctttttggagccatggacggtgccatcaagttcgtcaaaaacgatgca
attgccggtttggtgatcactggggtcaatttgcttggtggacttgcagtgggaatgctg
caaaaagacatgagcttttctcaagctgccaatatctattccattttgtccgtaggcgac
ggattggtagccatcattccttccttgctgatttccgttgctgcaggccttattgtgacc
cgggttaccaagggtgaagaagagggttccagcaccgcatccgacatgttcaaggatttg
tcccgaaactcaaatgccttgcaaatcagtggtgtgttttgcctgctgtttgcatttgtt
ccaggcatgcccgcacctgttttcgtgattacttccctggcattttttacgggctggtat
ttcatgtccggtagagatgagaagcccaaggaaatcaatattgaacagcagtttacggac
ttgatgggacctgaccacagaaaggccctggaagatgtcacgaccactgacacctatgcc
cccctgcaaattcgggtacccgaggacgtagagcctacagtcatcaaccagatccaaaac
atttgcagaatcgccagaaacaggcaagttgaacaactcggcattgttctccccttgttt
gacttgacgcgccaccgtgaggcctatgcggaggtctatgtcttcggtgtgcctgcactc
agcctgaacctgtccgaaaaacggatgagcattctggagccaactgaaaaaatccagaat
gttgatgctcaaattgaatttgctgttgagaaagacaaaaccaccgggcggtatcaccac
ctgtgtgagccaactttcaagcccaggttggaccagcacggcttagtctacaaaacatac
gaatcgcgcttgcttgaacaggtggaaattttgttggtcagcagaattcatcagatgttt
acgctcaatgaataccagcggcatctggtttcccttggagatcgcttcgctgagcaactc
aaggagcttgaaagggtattgcccaccaccaaggtggttgaagtgttgcaaaagctgatg
cgtgaacgtgtgtcgatcaagaacctccggaccatttttaactccctcattgagtggggg
cagcgtgaacgtgatgtggatgtcattacagaacaggttcgcaggtccctgcatgaacaa
atctgtcatcagtactctcaatccaaaaccatgcgaattcttttgctggatgtcgagttt
gaacagatcattcgtgagtcggttcgaagtcaaggtagcaacagctatcttgatattgac
tccagttcaatcaatgaaatggtggcgatgatcgagcagcaaatgggcccctatcttcac
gaagacctcccaccagccattgtatgttccatggattgtcgaatccatattcgccagatg
atcgagcgatcactgttctgcatacccgtcctttcccatcaggaggtttcatccaacctg
gaaatacaagtgcttggcaacattgcaattaccgagttgcattcttcaaatcgttaa

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