Limnobacter thiooxidans: RGQ30_31200
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Entry
RGQ30_31200 CDS
T09704
Name
(GenBank) DNA cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00270
Cysteine and methionine metabolism
lto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RGQ30_31200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lto03000
]
RGQ30_31200
03032 DNA replication proteins [BR:
lto03032
]
RGQ30_31200
03036 Chromosome and associated proteins [BR:
lto03036
]
RGQ30_31200
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lto02048
]
RGQ30_31200
Enzymes [BR:
lto01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RGQ30_31200
Transcription factors [BR:
lto03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RGQ30_31200
DNA replication proteins [BR:
lto03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RGQ30_31200
Chromosome and associated proteins [BR:
lto03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RGQ30_31200
Prokaryotic defense system [BR:
lto02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RGQ30_31200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
BET27619
UniProt:
A0AA86J100
LinkDB
All DBs
Position
complement(3450479..3452050)
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AA seq
523 aa
AA seq
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MTLRKPILVIDLFAGPGGLGEGFSSILDSAGSPRFSLKLSAEKDPIAHKTLSLRSLYRKF
SPGKVPDCYYEHIRGEISRDELFGHPDTEEAAREALEEARNFELGKDNPEDLDFRIRTAL
AGADDWVLIGGPPCQAYSVAGRSRRTRESLEKFESDEKHFLYKEYLRIIRAHKPAVFIME
NVKGMLSSKHGGTSIFEKIVADLSKPGDDLEYQIHSFVKPGVAGEIAPHDFVIAAERFGV
PQGRHRVILFGIRSDVARSVPAITCSPEKFILNAEQAHVTVGQTLSDLPKLRSKLSKETD
GHQQWLSALAETQDKIQFYRSDYIEPVFREIGLAVKEARHHASTGGNFLRYELSDNQLQN
GLKEWFSDARLGGVIQHDTRSHMRSDLNRYMFTAAYGKVHKYSPKIADFPRPLLPNHGNV
SSIKVPFVDRFRVQLADSWSSTVVSHIAKDGHYFIHPDPSQCRSLTVREAARLQTFPDNY
FFAGNRTEQYTQVGNAVPPLLAQKIAEVVSRFMETWSLNRSHQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaccctacgcaaacccatcctggtaattgatctttttgctgggcctgggggtctagga
gagggtttttcatcaatcctagactctgctggctctccccgtttctccctaaagttgtct
gcagaaaaggacccgattgcgcataaaacgctttcccttcgttccctatataggaaattc
tcgcccggcaaggtgcctgattgctactacgaacatattcgtggcgagatttcacgtgat
gagctgtttggacatccggataccgaagaggctgctcgtgaagctttggaggaggcacgt
aacttcgaacttggtaaagacaatcctgaagacttggattttcggatcaggaccgctctt
gccggggctgacgactgggttctgatcggggggccgccctgccaggcatactctgtagcc
ggtcgttcaagacggactcgtgaatcactcgaaaaattcgaaagtgatgagaagcatttt
ctttacaaagaatatttgagaatcatccgcgctcacaagccagctgtattcatcatggaa
aacgtgaaaggcatgctgtcatcgaaacacgggggtacctctatattcgagaaaatcgtg
gctgatctttccaaacctggcgatgacctcgaatatcagattcattcatttgtgaagccg
ggcgttgccggtgagatagcaccgcacgactttgtaatagcggcggaacgtttcggtgtg
ccacagggtaggcatagagttatcctcttcgggattcgctctgacgtggcgcggtcagta
ccagcgataacttgttcgccagagaagttcatcctgaacgcggagcaagcgcatgtaact
gttgggcagacactttctgatctgccgaaactcagaagcaaattatcgaaagaaaccgat
ggtcaccagcaatggctctctgccttggctgagacgcaggataagattcaattctaccgc
tccgattacattgaaccggttttcagggaaattggattagctgtcaaagaagcaaggcat
cacgcatctactggtggaaacttcttacgctacgagctttcagataatcaattgcaaaat
ggattaaaggaatggttttccgacgctcgtctcggaggagtcattcaacacgatactcgc
tcgcacatgcgctcagacctgaaccgttacatgtttactgcagcgtatggcaaagttcac
aagtactcaccgaaaattgcagacttccccagaccgctacttccgaatcacggaaacgta
tcttcaatcaaggttcccttcgtagaccgtttcagagttcagttggctgactcatggtct
tcaacagtagtctctcacatcgcgaaagacgggcattacttcattcaccctgatccctca
caatgcagaagtctcacagtcagggaggctgcgcgactgcagactttcccggataattat
ttcttcgctggtaaccgtacagagcagtacactcaggttggtaacgccgtccctccactt
ctcgcacaaaaaatcgctgaggtggtctcgagattcatggaaacgtggagcctgaatcga
tctcaccagtag
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