Leucobacter triazinivorans: EVS81_14955
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Entry
EVS81_14955 CDS
T05843
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ltr
Leucobacter triazinivorans
Pathway
ltr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ltr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EVS81_14955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ltr03019
]
EVS81_14955
03009 Ribosome biogenesis [BR:
ltr03009
]
EVS81_14955
Enzymes [BR:
ltr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
EVS81_14955
Messenger RNA biogenesis [BR:
ltr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EVS81_14955
Ribosome biogenesis [BR:
ltr03009
]
Prokaryotic type
rRNA processing factors
EVS81_14955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QBE49967
UniProt:
A0A4P6KHE5
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All DBs
Position
3311931..3314399
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AA seq
822 aa
AA seq
DB search
MVKSTTEDHHEDAAGAVDAVGAEQAVATAPAGDVRDESPESGAAAESPAAVPFAEMSPEE
RFRATTRLIFLAPDVPPVQPRPRRGDWRFGDGRPGDARQGDPRQAEPRRDARGGELRHLD
DLLDQQFARDEDTGERDSGSRRTRRRSGGGEGSSEDDAPRRQQRQAPVITEPQKVKGSTR
LEAKKQRRRDGRDSGRRRMVITESEFLARREAVDREMIVRTTADRVQIGVLEDKVLVEHY
VARSSESSLIGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYSGEVDWSEFEGGNAARKIE
NALKPGDQVLVQVTKDPVGHKGARLTSQISLPGRFLVYVPGGAMNGISRKLPDTERARLK
KILKEVLPSGAGVIVRTAAEGASEEQLTHDVQRLTRQWESIQKRVAKGGGPVLLHSEPDM
LIKIVRDVFNEDFHRLLISGDDTYATIENYLSQVAPDLLQRVERHEGERDVFDEYRITEQ
IAKALDRKVWLPSGGSLVIDRTEAMTVIDVNTGKFVGSGGNLEETVTKNNLEAAEEIVRQ
LRLRDIGGIIVVDFIDMVLESNRDLVLRRLVECLSRDRTKHQVAEVTSLGLVQMTRKKLG
LGLLESFSEPCEVCAGRGIIVHHEPVTKHRSEGSSRSSKRGKGAPAQQESKAQTHSITDG
AKNMLAQVAASTIQSAKGADGGGASGAGGARASYGDDEAARTGAPVSGRVRSRGSDERAE
TPESTQAVSGSLLESVLEALPEAPATGAGRSRSRRVSTAPIRGGEDQPHRGSARAADGGA
GDDGAAEGEAAEGGAADAAQQAQLALAQALEETVRRREAERE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagagcacaacagaagaccatcacgaagacgcagccggcgcggtcgacgccgtc
ggcgcagagcaggccgtcgccacggcacccgccggcgatgtccgtgacgaatcacccgag
tcgggggcggctgcggagtcgcccgcagccgtccccttcgcggagatgagcccggaggag
cgcttccgagcgaccacccgcttgatcttcctcgcgcccgacgtgccgccggtgcagcct
cggccccgccgcggcgactggcggttcggcgacggccgcccgggcgatgcgcgccagggt
gatccccgccaggccgagccgcggcgcgacgcgcgaggcggcgagctgcgtcacctcgac
gatctgctcgaccagcagttcgcgcgcgacgaggacacgggcgaacgcgattcgggatcg
cggcgcacccggcgccgctcgggcggtggtgagggatcctccgaggacgacgccccgcgc
cggcagcagcgccaggcgcccgtgatcaccgagccgcagaaggtgaagggttcgacccgg
ctggaggccaagaagcagcggcgccgcgacggccgcgactcgggccgccgccgcatggtg
atcacggagtccgagttcctggcacgccgtgaggcggtcgaccgcgagatgatcgtgcgg
acgacggcggatcgcgtgcagatcggcgtgctcgaggacaaggtgctcgtcgagcactac
gtggcacgatcgagcgaatcgtcgctcatcggcaacgtctatctcgggcgcgtgcagaac
gtgctgcccagcatggaggcggcgttcgtggacatcgggcgcggtcgcaacgccgtgctc
tactcgggcgaagtcgactggtccgagttcgagggcggcaatgccgcgcgcaagatcgag
aacgcgttgaaaccgggcgaccaggtgctggtgcaggtgaccaaggatccggtcggccac
aagggtgcccgtctcacgagtcagatctctcttccggggcgattcctcgtgtacgtgccg
gggggcgcgatgaacggcatctcccgcaagctccccgataccgagcgcgcgcgcttgaag
aagatcctcaaggaggtgctgccgagcggcgccggagtgatcgtgcgcaccgccgcggaa
ggcgcgagcgaggagcagctcacccacgatgtgcagcggctgacccggcagtgggagtcg
atccagaagcgggtggcgaagggcggcggtcccgtcctgctgcactcggagcccgacatg
ctcatcaagatcgtgcgggacgtcttcaatgaggacttccaccgtctgctgatctcgggt
gacgacacctacgcgacgatcgagaactacctctcgcaggtggcgcccgacctgctgcag
cgggtggagcgccacgaaggtgagcgcgacgtcttcgacgagtaccgcatcaccgagcag
atcgccaaggcgttggatcgcaaggtgtggctgccctccggcggctccctggtcatcgat
cggaccgaggcgatgaccgtgatcgacgtgaacacgggcaagttcgtcggatccggtggc
aacctcgaggagaccgtcaccaagaacaacctcgaggcggccgaggagatcgtgcgccag
ctgcgcctgcgcgacatcggcggcatcatcgtggtcgacttcatcgacatggtgctcgag
tcgaaccgcgacctggtgctgcgccggctggtcgagtgcctcagccgcgaccgcacgaag
catcaggtggccgaggtcacctctctcggcctcgtgcagatgactcgcaagaagctcggt
ctggggctgctcgagtcgttcagcgagccgtgcgaggtgtgcgcggggcgcgggatcatc
gtgcaccacgaaccggtgacgaagcaccggagcgaggggtcgtcgcgcagctcgaagcga
ggcaaaggcgcaccggcgcagcaggagtccaaggctcagacgcactccatcaccgacgga
gcgaagaacatgcttgcgcaggtggcggcctcgacgatccagagcgcgaagggcgctgat
gggggcggggcatccggagccggcggagcgagagcgtcctacggggatgacgaggccgcc
cgcacgggagcaccggtcagcggtagggtgcggtcgcgcggatcggacgagcgagcggag
acccccgagtcgactcaggccgtatcgggatcgctgctcgagtcggtgctcgaagccctg
ccggaggcgcccgcgacgggcgcgggccgcagccgcagtcgccgggtctccaccgccccg
atccgcggcggcgaagatcagccgcaccgcgggtcggcacgcgccgctgacggcggcgca
ggtgacgacggagcggctgagggcgaagcggccgagggcggcgcggcggatgcggcgcag
caggctcagctcgcactcgcgcaggcgctcgaggagacggtgcgccgtcgcgaggcggag
cgggagtga
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