Leuresthes tenuis (California grunion): 140267485
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Entry
140267485 CDS
T11698
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04517
IgSF CAM signaling
ltu04519
Cadherin signaling
ltu04520
Adherens junction
ltu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140267485 (afdna)
04519 Cadherin signaling
140267485 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
140267485 (afdna)
04530 Tight junction
140267485 (afdna)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFDN
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
Yop-YscD_cpl
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
140267485
NCBI-ProteinID:
XP_072218869
LinkDB
All DBs
Position
Unknown
AA seq
1948 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISRPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERQLDLDEKPLVVQLNWNKD
DREGRFVLKNENDILPKKSQSNGPDKEKDGVIQNFKRTLSKKEKKKEKKREKEFARIPDG
DELTLGREDGENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFMSSDGR
PDSGGTLRIYADSLKPNIPYKTILLSTRDTADFAVVEALEKYGLEKENPREYCIARQDDK
SGKEVILDDLECPLQIFRDWPADRGALVFQLKKRPPDYQGRKGRKVDDKGLRGRDSSLPP
EKLPYLVELSPGRGNHYAYYAYRHPEDGSDSRDKPKLYRLQHSITEVGSDCTEDGAIQLL
GPGILPHHCNLTHSEGMVTVTPHGPDADTFVDGQRVTETTVLRSGSTLQFGSTHVFKFVD
PMFDQGGKREPAMMRSRHKSGSVPETTFDLHGDVHSGAALPTSKSSGKLEMERGMVKPMI
RGEQQDSRSQDVSAERTELSLPAGIEFRDNSEDTFLSAIINYTNSSTVHFKLSPTYVLYM
ACRYVLSPGYRPDMSPSERTHKVIAIVNKMVSMMEGVIQEIPEGDQKQKNIAGALAFWMA
NASELLNFIKQDRDLSRITLDAQDILAHLVQMAFKYLVHCLQADLNNYMPAFLDDPEEHN
PQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTDTDSGLCCH
YWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNIHNTCFKL
NSLQLHALMTNYHCAPDEPYIPPELIEHVVAVAENTADELARSDGREVQLEEDPDLQLPF
LLPEDGYSCDVVRNLPNGLQDFLEPLLQRGFCRLTPHPRSPGTWTVHFEGADCDSHFSAA
DNSDMPMRKDPEVVTVTLKKHNGMGLSIVAAKGAGQEKLGIYIKSVVKGGAADNDGRLAA
GDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMPRAS
DRGRDKNGKLRPKSEGFELYNNSVQNGSPESPQPGWDSYPEPKKMSSEDRLLKNRADHRS
SPNVANQSQSPASKSVYPGGPGTKITSVSTGNLCADDEPSPPRPEAYPIPTQTYPREYFT
IPASKSQDRVVGPGQGPSQHWQGMEDRERLPVVDSMQRINHSQEELYPPPGGLRPDERMH
QHYPQDYQHRDLDYQHRDLDYQRGPPGGVGPDHWAPQPQVSSSLESSTSSQEHLNFSASS
SSSNKTQNQKTGPGRWKTPNTLHAVTPHPAQPPSRSDLPPPPPPPPAPYPDAYDPYDPQP
DLPLPPPPAAVSSVTAQQAADRKKREEQQRWYEKEKARLEEERERKKREQERKLGQIRAN
PVMPVQPHNNGGTMPPPHHQPPMASMAPPQPYLPPQPQPPPSRPEKLASLPRSAVPHPAS
ASNPAGMDTVIRELLPQQQPRTIERRDLQYITISKEELTSSDSLSPDPWKRDAREKAEKQ
QQLHIVDMLDKEIQELQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDDEDDDEDDED
MDTMLIMQRLEAEKRARQQTAVPAISVLDLLQDEERRRKQQLEEIRKREAEERAKQEEER
RWREDERAKREAEEKRRQEEEYYTRLEAERRRQHDEAERKLLTPDEPAGLYRPPLPRDYQ
PPAPHNPTNTPPPPPQRNTSYLKTQVTSPDTLYTAKFVSYAGDEEDEEEGKEASGQVKQS
ATRKSYGDLPASVTPNHSKPQPPPTARKPRPLSDGIFLSSSFQPPVNNSNSTGPPLPAKP
SSIPPGGFKGFNSYTGNSAGVVGTGEVYNDPRDKWTKSQEQENSIPSGAPESLTFKERQR
LFSQGKEVSNKVKASRKLMELENELNTK
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagaggaggaaactggccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccggcccacagaggacctggagttccatggc
gtgatgcggttctacttccaggaccgggttgccggtaacttcgccacgaagtgcatcaga
gtctccagcacagcgacaacgcaggacgtcattgagacgttagccgagaagttcagacca
gacatgaggatgctctcctcgccaaaatactccctgtacgaggtccacgtcagtggcgaa
gagcgtcagctggatctggacgagaagcctcttgttgttcagctgaactggaacaaagac
gaccgagagggccgcttcgtcctgaagaacgagaacgacatcctgcccaagaagagtcag
agtaacgggccggataaggagaaggacggcgtgatccagaacttcaagaggaccttgtct
aaaaaggagaagaagaaggagaagaagagggagaaggagtttgctcggattcccgatgga
gacgagctgacgctcggccgcgaggacggtgagaacagccgcctggcagcagaggtctac
aaagacatgccggagacgagcttcaccaggaccatctccaacccagaggtggtgatgaag
aggagacgtcagcagaaactggagaagcgcatgcaggagttcatgagcagcgacggcagg
ccagactcgggaggcacgctgaggatatacgccgacagtctgaagcccaacatcccatac
aagaccatcctgctctccacgagagacacagctgacttcgcggtggtggaggcgctggag
aagtacgggctggagaaggagaaccccagagagtactgcattgcacggcaagatgacaag
tcgggcaaggaggtgattctggatgatttggagtgtccgctgcagatcttcagagactgg
cctgctgatcgaggagcgttggttttccagctgaagaagaggcctcctgactaccagggc
aggaagggaaggaaggtggacgacaagggccttagagggagggacagctcgctgccacct
gagaagctgccttatttagtggagcttagtccagggcgagggaatcactatgcctactac
gcctatcggcacccagaagacgggtccgactctcgagataaaccaaagctgtaccggctt
cagcacagcatcaccgaggtgggctcagactgcacagaggacggcgccatccagctgctc
ggtccagggattctgccccatcactgcaacctcacgcacagcgaaggcatggtgacggtg
acgccgcacggccccgacgcggacaccttcgttgacgggcagcgcgtcacggagaccacg
gtgctgcgctccggctccaccctgcagtttggctccacccacgtctttaagtttgtggac
ccgatgttcgaccagggagggaagagggaaccggccatgatgaggagccgccacaaatcc
ggcagcgtaccagaaaccaccttcgaccttcacggagacgtccacagtggagctgctctg
cccaccagcaagagctcaggaaagctggagatggagagaggcatggtgaagcccatgatc
agaggggagcagcaggacagcaggtctcaggacgtttcagcagagaggacggagctctcg
cttcccgccggcatcgagttcagagacaactctgaagacaccttcctctccgccatcatc
aactacaccaacagctccactgtccacttcaagctctcgcccacgtacgtgctgtacatg
gcctgccgctacgtcctgtcgcccggttaccggcccgacatgtcgccgtcagagaggacg
cacaaagtcatcgccatcgtcaacaagatggtgagcatgatggaaggagtcatccaggag
attcctgaaggggatcagaagcagaagaacatcgcaggagcgctggctttctggatggcc
aacgcctccgagctgctcaacttcatcaagcaggaccgagacctgagccgcatcacgctg
gacgcccaggacatcctcgcccacttggtccagatggccttcaagtacctggtccactgt
ctgcaggccgacctgaacaactacatgcctgccttcctggatgaccccgaggagcataat
ccccagagacccaagatagaggatgtgctgcacacgctgacgggcgccatgtccttgctg
cgtcgctgtcgggtaaacgccgctctgaccatccagctcttctcgcagctcttccacttc
atcaacatgtggctgttcaacaagctggtgacggacacggattcggggctgtgctgtcac
tactggggcgccatcctccggcagcagctcagccacatcgaggcctgggctgagaaacag
ggcctggagctcgccgctgactgccacctcagtcggattgtgcaggccaccaccctgctg
acgatggacaagtactccatgcaggatgtgcagaacatccacaacacctgcttcaagctc
aactccctgcagctccatgccctcatgaccaactaccactgcgccccagatgagccgtac
atcccgcctgagctgattgagcatgtggtggcggtggcagaaaacacagctgatgagctg
gcgaggagtgatggcagggaggtgcagctggaggaggatccagacctccagctgcccttc
ctccttcccgaggacggctactcctgcgacgtggtgcgaaacctccccaacggcctgcag
gacttcctggagccactgctgcagagaggtttttgtaggctaacgcctcatccacgctca
cctggtacctggacggtccactttgagggagcggactgcgacagccacttctctgctgcc
gacaactctgacatgccaatgaggaaagacccggaggttgtcacagtaaccctgaaaaag
cacaacggcatgggcctcagcatcgtcgcagccaagggtgctggtcaggagaagctgggc
atctacatcaagtctgttgtcaaaggcggagctgctgataatgacgggcgcctggcagca
ggcgaccagttgctgagtgttgatgggcgcagcctggtcggcctgtcgcaggagagagcg
gcagagctgatgacgaggaccggctcagttgtgactctggaggtcgccaagcagggagcc
atttaccacggactggcaacgctcctcaaccagccgagtcccatgatgcccagagcgtca
gaccgaggccgcgataagaacgggaagctgcgaccaaagagcgaaggcttcgagttgtac
aacaactcggtgcagaacggctctccggagagtcctcagccaggctgggactcttacccc
gaaccaaagaagatgagcagcgaagaccggcttctcaagaaccgggccgaccaccgctcc
agccccaacgtagccaatcagagccagagtcctgcgagcaaatcggtgtaccccggagga
cctggcactaagatcacgtccgtctcaaccggcaacctgtgtgcagacgatgagccttcc
cctcctcgtccagaggcctaccccatccccacccagacctaccccagggagtacttcacc
atcccagcctccaagagccaggatcgggttgtgggtccagggcaggggccttcgcagcac
tggcagggcatggaagaccgagaacgacttcctgtggtagacagcatgcagcggattaac
cactctcaggaggagctttacccgccaccaggaggcctgaggccggatgagcgcatgcac
cagcactatccgcaggactaccagcaccgagacctggactaccaacacagagatctcgac
taccagagaggtccaccaggaggtgtgggacctgatcactgggccccacagccacaggtg
tcctcttccctggagtcatccacatccagccaggagcatcttaacttctcagcctcttcc
tcgtcttcaaacaagacgcagaaccaaaagaccgggccgggccgctggaagactcccaac
acgctgcacgctgtgacgccacatccggcacagccgccgtcccgctccgacctgccccct
cctccgccgccacctcccgctccgtacccggacgcctacgacccctatgacccccagcct
gacctgccgctgccgccgccccccgctgccgtctcctcggtgacggcccagcaggccgcc
gaccgcaagaaacgagaagagcagcagcgatggtacgagaaggagaaagctcggctggag
gaggagagggagaggaagaagagggagcaggagaggaagttggggcagatccgggccaac
cccgttatgcccgtccaaccccacaacaacggaggaaccatgcctccgccccaccaccag
ccccccatggcctccatggccccgccccagccctacctcccccctcagccccagcctccc
ccatccagaccagagaagctggccagcctgccgcggtcagcggtaccgcacccggccagc
gcctccaaccctgcaggcatggacacggtgatcagggagctgcttccacagcagcagcct
cggaccatcgagaggcgagacctgcagtacatcaccatcagtaaggaggagctaacgtcc
agcgacagtttgtctccggacccctggaagagagacgcccgcgagaaggccgagaaacag
cagcagcttcacatcgtggatatgctggacaaggagatccaggagctccaggcgaagccg
gagcgaacggcagaagaaagcgaccggctcaggaagctgatgctggagtggcagttccag
aaacggctgcaggagtccaagcagagcgacgacgaggacgacgacgaggacgacgaggac
atggacacgatgctgatcatgcagaggctggaggccgagaagagagccaggcagcagact
gctgtcccagctatctctgttctagacttgttgcaggacgaagagcgacggcgtaagcag
cagctggaggagattcggaagcgcgaggcagaggagcgagcaaagcaggaggaagagcgg
aggtggagggaggatgaaagagccaagcgagaagccgaggagaagaggagacaggaggag
gagtactacactcgcctggaggccgagcggcggcggcagcacgacgaggcggagagaaag
ctgctgacgcctgacgagccggccggtctgtatcggccccctctgccccgggattaccaa
ccccccgccccccacaaccctactaacacccccccaccccccccacagagaaacacctcc
tacctcaaaacccaagtcacctcccccgacacgctctacaccgccaagtttgtctcctac
gcgggcgatgaggaggacgaggaggaaggcaaggaagcctcaggtcaggtgaagcagtcg
gcgacccggaagtcgtacggcgacctcccggcctccgttacacccaatcacagcaagcct
cagccgccgcccactgcgcgcaagccccgccccctttctgacggcatcttcctgtccagc
tcgttccagccgccagtcaacaactccaacagtacaggccccccccttcctgccaaaccc
agctccatccccccaggaggctttaaaggatttaactcgtacactggaaactcagctgga
gttgtaggaacaggagaagtctacaacgacccgagagacaaatggacgaagagtcaggag
caggagaactcgatccccagcggcgctccggagagtcttaccttcaaggagcgccagcgt
ctcttctctcaggggaaggaggtttccaacaaggtcaaggcttcccgcaaactcatggag
ctggagaacgagctcaacaccaagtag
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integrated database retrieval system
