Leuresthes tenuis (California grunion): 140270041
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Entry
140270041 CDS
T11698
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04140
Autophagy - animal
ltu04142
Lysosome biogenesis
ltu04148
Efferocytosis
ltu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
140270041 (vps39)
04140 Autophagy - animal
140270041 (vps39)
04148 Efferocytosis
140270041 (vps39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140270041 (vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ltu04131
]
140270041 (vps39)
Membrane trafficking [BR:
ltu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
140270041 (vps39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
VPS18_solenoid_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
140270041
NCBI-ProteinID:
XP_072221212
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MHDAYESVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAGSNRFEVTLEKSNK
NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQTSAGE
ERLRMCVAVKKKLQLYYWKDREFHELQGDFGAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSVELQRPRFITSAGPNIVYVASNHFVWRLVPVSI
ASQIRQLLQDKQFELALQLAKMKDDSDGDKKQQIHHIQNLYAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPADYRKQLHYPNPLPTLSGAELERAHLALIDYLTHKRSHLVKQL
NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGMENLG
IIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDKVLQFLKEGFEELAIPYLEHIIHVWD
ENGPEFHNVLIQLYLSRVQGLMKQYLNSLPAGVPAVPAGQEKGELGEFRNKLLSFLDISS
SYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHGHYSSAVE
GNKDVYLSLLRMYLSPPDAHCLGPIKMELSEPQANLQAALHVLELHHSKLNTTKAINLLP
ANTQIREIRVFLESVLEEKAQMKRCNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRSICPTEQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcgtatgagtcggtgcctatcttggagaagcttcctcttcagattgactgc
cttgcggcctgggaggactggctgcttgttggaacaaagccagggcatctcctgctctac
cgaataaagaaggatgcaggctccaatcggtttgaagtgactttggaaaaatccaataaa
aacttttcaaagaagatacagcagctttatgttgtctcgcagtacaaaattctggtcagc
cttctcgagaacaacatccacgtccacgaccttctgactttccagcagatcactgtggtg
tccaaagccaaaggagccacgctgtttgcatgcgacctgcagcaaaccagcgcgggggag
gaaaggctcagaatgtgtgtggcagtgaaaaagaagctccagctgtattactggaaggat
cgagagttccacgagctgcagggggactttggtgcgccagatattccaaagtccatggct
tggtgtgaaaattccatatgtgttggtttcaaacgagactattacctcatccggatggat
ggccgcggctccattaaggagctcttccccactgggaaacagttagaacctcttgttgcc
ccactggctgatgggaaggtggctgttggacaggatgacctaactgtggtacttaatgag
gagggagtttgcactcagaagtgtgccctgaactggacagatatccctatcgccatggag
caccagcctccctacatcatcgcggttctccctcgatacgtggagatacggacatttgag
ccgaggctgctggtgcagagtgtggagctgcagagaccacgcttcatcacctccgcaggg
ccaaatattgtgtacgtcgccagcaaccactttgtgtggcgcctggtacctgtttcaata
gccagccagatccggcagcttcttcaggataagcagtttgagctggctcttcagctggcg
aagatgaaggatgattcagatggcgataagaagcagcagatacatcacatccagaatctc
tacgccttcaatctgttttgccagaagagatttgatgactccatgcaggtgtttgccaaa
cttggcacagatcccacacatgtgattggactctacccagacctactcccagcagactac
cgcaaacagctgcattaccccaatcctctgcctactctgtctggagctgaactagagagg
gctcacctcgctctcatcgattacctcacccataaacgcagccaccttgttaagcagctg
aatgactctgacccctctacaacatctccactcatggagggcacgcccactatcaaaagc
cgcaaaaaactcctgcagatcatcgataccaccctgctgaaatgttacctgcacaccaat
gtggccctggtctcccctctgcttcgcctggagaacaaccactgccacattgaggaaagc
gagtatgtcctaaagaaagcccacaagtacagcgagctcatcattctttatgaaaagaag
ggcctgcaccagaaagctctgcaggtgctgttggaccagtccaccaaagccaactctccc
ctgaagggccacgagcgaacagtgcagtacctccaaagactgggaatggagaacctgggc
ataatctttgagttttctccctgggtgctgaagatctgtcctgaggatggcctgaagata
tttaccgaagacctgactgaggtggagactttgcccagagacaaagtgctgcagttcctg
aaggaaggctttgaggagctcgccatcccatatttggagcacatcattcatgtgtgggac
gagaatggacccgagtttcacaacgtcttaatccagctctacctgagcagggtccaaggc
ctcatgaaacagtacctcaactcattgccagcaggggttccagctgttcccgcagggcag
gagaaaggtgaactcggagagttcaggaacaagctgctgtcttttctggatatttcgagc
agctacgaaccttcaagactcatcagtgactttccatttgatggtttgctggaggaacgg
gctctgcttctgggtcggatgggtaaacacgagcaggcgctcttcatctatgtgcacatt
ctgaaagacacccgcatggctgaagaatactgtcacggacattacagcagcgcagttgaa
ggaaataaagatgtttatctgtctctgctgcgaatgtacctgtcacctcctgacgcccac
tgcctggggcccatcaagatggagctttctgagcctcaggccaacctccaggctgccctg
catgtccttgagctgcaccacagcaagctcaacaccaccaaggctatcaatctgctccca
gcaaacactcagatccgagagatccgggtgttcctggagagcgttctggaggagaaggct
cagatgaaacgctgcaaccaggtgctgaagagtctgctgcaggctgagttcctcagagtg
caggaggaacggatcttccaccagcaggttaaatgcgtcattacagaagagaagacctgt
agggtgtgtaagaagaagataggaaacagtgcgtttgccaggtatcccaacggcgtggtg
gtgcattatttctgctgcaaagatcgcagcatctgtcccactgagcagtaa
DBGET
integrated database retrieval system
