Leuresthes tenuis (California grunion): 140270337
Help
Entry
140270337 CDS
T11698
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03013
Nucleocytoplasmic transport
ltu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140270337 (srrm1)
03015 mRNA surveillance pathway
140270337 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ltu03019
]
140270337 (srrm1)
03041 Spliceosome [BR:
ltu03041
]
140270337 (srrm1)
Messenger RNA biogenesis [BR:
ltu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140270337 (srrm1)
Spliceosome [BR:
ltu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
140270337 (srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
140270337
NCBI-ProteinID:
XP_072221571
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLASLRKVDEDKKDKDSRERAQSKSPRRRKTTSPSPRRRSP
SPRRRSPSPRRRSPSPRRRSPVKRERKRSPSPSPRRKPSPVGGSSTPPPLMQLPTKPTEQ
LLEPDTSGRAAPEPVTQEASSTGETVVEVVKADSVTEVKEVSPEKTHKKEERPRSREREK
DTRRERPHHRSRSRSHSRSRRRRSRSRSYSPRRRQSPRRRMSPRRRSPPRRGPTSSRHRH
RRSPVRRRRSRSASSSGSSSSGSRSPKKPVKRISTTPPRKPVHRPDTSISPAGKIKRSPS
PRARRGRGSPSPPRSSGLKRKPGGRVDSPSDNAKAIPSEESESEEDKNEKGATADSVQQR
RQYRRQNQQSSSDSGSSSSEDEGPKRSTMGPGARNGEVRRRRSRTPSPRRRHRDASPRRR
RSPSPGHRRRSPSPPRRRRSPSPPRRRSPSPPPRRRSLSSRRYSPPIQRRYSPSPLPPQK
RKVSRSPTKRSSPGVKRRLSRSPKRRSSPALRRRSPHSSTSPPRHRRSPMMPSSRPSRDA
RSPVGAARRLSPSPANRSHAVRGSPSPQRRSSISPSNHRRQHSPSHSSKLIRRVSRTPEP
RNNQRPSPSSKPIRRASSRSVSPRPAAQKRPVPTSASPSPSRSASGSPPPPPAKKASSGS
GSRSPSKNSDVEVGGKKKKKKKEKKHKKEKKHKKHKKHKKEKSGGTVTGDGQENQVAEDD
GDSRKESDSEVDDGLDDLEKHLREKALRSMRKAQMSPSQMS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacaagtgcggagcaagacaaccgtttcagcaacaag
cagaagaaactgctgaagcagctgaaatttgcagaatgtctggacaaaaaggtggacatg
accaaagtgaacctagaagtcatcaaaccttggattactcagcgagtgacggagattctg
gggtttgaagatgatgtggtcatagagttcatattcaaccaacttgaggagaagcacccg
gatagcaagatgatgcagatcaacctgacggggttcctgaatgggaagaatgcccgagag
ttcatgagggacctgtggcccctgctgctgagtgcccaggagaatatcgctggcatcccc
tctgcttttctggaacagaagaaagaggaaatcagacagagacagattgaacaggagaag
cttgcatccttaaggaaggtggatgaagataagaaggacaaggactccagggagagggct
cagtcaaagagcccaagaaggcgcaagacgacatcgccatcaccaaggagaaggtcgcca
tcaccaaggcgaaggtcgccatcaccaaggcgaaggtcgccatcaccaaggcgaaggtca
ccggtgaagcgggaaaggaaacgcagcccctcaccttccccaagacgcaaacccagtcct
gttggtggcagctcaacacctccacctctcatgcagttacccacaaaacctacagagcag
cttctggagccggacacatctgggagagctgcgccagaaccagtcacccaagaagcctct
tctaccggtgagacagttgttgaggtggtaaaagcagactcggtgactgaagtcaaagaa
gtctctccagagaaaactcataaaaaagaggaaagaccaaggtctcgcgaaagggagaag
gacacaaggagagagagacctcaccaccgctcacgttcccgttctcattcccgctcccgc
agacggcgctcccgatcaagatcctactcccctcgtagaagacaaagtcccagaaggaga
atgtccccccgtcgaaggagtccccccagacgaggccctaccagctctcggcacagacac
aggcgctcccctgtccgcaggaggcgctctcgttctgcttcatcctctggcagcagttcc
tcaggctcacgctcacctaaaaaacctgtgaaaagaatatctaccacaccaccccgaaaa
ccagtccatcgtcctgatacttccattagtcctgcaggaaagatcaaacgatcaccatct
ccacgagccagaagggggcggggctctccttccccacccagatcatcaggtttaaagcga
aaaccaggaggaagggtcgattctccatctgataatgctaaggccataccttctgaggag
tcagagtcagaggaggataaaaatgagaaaggggcaacagctgattcggtgcagcaacga
cgtcagtatcgcagacagaatcaacagtcgtcttcagattctggatcttcctcctccgaa
gatgaagggcccaaaaggtcaacaatgggaccgggtgccagaaatggtgaagtcaggagg
agacgcagtcgtacaccctctcctcgtaggcgacaccgtgatgcctcaccgaggagaaga
cgttcaccatctcctggacacaggcgtcgctccccgtctcccccacggcgtcgcagatct
ccctctcctccgagacgcaggtctccttccccaccaccccgtcgtagatctctgtcgtcc
agacggtattctccccctatccagcgtcgctacagcccatcacctctgcctccacagaaa
aggaaagtgtctcgttcacccacaaaacgctcatctccgggtgtaaagcgacgcttatcc
aggtctccaaagcgcagaagctctcccgctctaaggagacgctcacctcactcgtctaca
tctccacccagacacaggaggagccccatgatgccttcttctaggccaagcagggatgca
cgatccccggttggagcagccagacggctctccccatcacctgcaaaccgcagtcacgct
gttagaggttccccgagtccccagagacgctcaagtatatctccatctaaccacaggagg
caacattccccttcacatagtagtaaactcatccgcagagtgtctcgtacccctgaacca
cgcaacaaccagagaccctccccgagctctaagcctatcaggagagcgtcctccagatca
gtgtcccctcgtccggctgctcaaaaacgtcctgtcccaacatctgcatccccgtcacca
tctcgctccgccagtgggtctcctccaccacccccagctaaaaaggccagcagtggttct
ggcagtcggtctccaagcaagaattcggatgttgaagttggtggaaagaagaagaaaaag
aagaaggaaaagaaacataagaaggagaagaaacacaaaaagcacaagaagcacaagaag
gagaaaagcggtggcactgtgaccggagacggtcaagagaaccaggtagcagaagacgat
ggagactcaagaaaggagtcggacagtgaagttgacgacgggttggacgacctggaaaag
caccttcgagagaaggccctgcgctccatgagaaaagcccagatgtctccttcacagatg
tcatga
DBGET
integrated database retrieval system
