KEGG   Leuresthes tenuis (California grunion): 140272105
Entry
140272105         CDS       T11698                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ltu  Leuresthes tenuis (California grunion)
Brite
KEGG Orthology (KO) [BR:ltu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ltu01009]
    140272105 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ltu03036]
    140272105 (kdm5c)
Enzymes [BR:ltu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     140272105 (kdm5c)
Protein phosphatases and associated proteins [BR:ltu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     140272105 (kdm5c)
Chromosome and associated proteins [BR:ltu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    140272105 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD BREX_BrxC_helical PHDvar_NSD
Other DBs
NCBI-GeneID: 140272105
NCBI-ProteinID: XP_072223544
LinkDB
Position
Unknown
AA seq 1610 aa
MEGEEFIAPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPPDWQPPFSVELDS
FHFTPRIQRLNELEAETRVKLNYLDRIARFWEIQGSSLKIPHIERRILDLFSLSKVVTDE
GGFEMVCKERRWARVAQRLGYPPGKNIGSLLRSHYERIVYPFEMFQSGSSLPPCKPKHYD
GEDVDKEYKPHSIPLRQSVQPSKMSSYGRRANRCQPDGPEDLPPHPLTTGSQLISAPEPT
EEDIEKNPELKKLQIYGAGPKMMGLGLVARDKGMRKKDELPQTVTVKDDVSPASGDMTIK
SEPVEPEERQSDGGTFHPQPPPPSLTVKPVVKKEEVKQENGKESNGEGDHTDGPCTKMTM
RLRRNLTNPQCVSTAVDARLMTLNYREKVDSFVCRMCGRGDDDDKLLLCDGCDDNYHTYC
LLPPLADPPKGNWRCPKCVAEECKKPAEAFGFEQATREYTLQSFGEMADAFKADYFNMPV
HMVPTELVEREFWRLVSSIEEDVTVEYGADIHSKEFGSGFPMNNGKRTLTKEEEEYARCG
WNLNVMPVLEQSLLCHINGDISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKT
WYGVPSVAAERLEEVMKKLTPELFEFQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEF
VITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMAA
SPEKLDLNLAAATHREMFIIVQEERKLRKSLMERGITEAEREAFELLPDDERQCDKCKTT
CFLSALACSNCPERLVCLYHTQDLCNCPTEKLYLRYRYTLDELLTMLHRLKVRSESFDSW
ANRVKEALEQEEGNKIEIHDLEKLKIEATEKKFPDNELLRKLNGVLKDIGCCQQTSAELL
SNSKSSESRMTLAELKSLVEKMQNLPCVMNPLKEVQVVLKIVEDFQKEAQSLVNKDWRKD
APPPEQLQALLEQGGKMPVVVPECKLLQGLKEQGHWLEEVRRTLGTEGGERREVTLDVLR
NLMEAGCNVPQSVSVETAMAELQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQL
IPVTLPNILALQGCLTRARAWVTDLEEIQNGEHYPCLDDLEGLVAIGRDLPVFMEELRQL
ELQVASAHSWRDKASKTFLKKSSQHSLLEVLCPCAKRRERRDEAESVDDPLDDSDTNTLG
LSAQDLRDPAAIVMAFKEGEHQEKDALLRLQKVNMCKSGLNTASHKENGRWDDAMETDTS
SHSENSVKENGNSNHSCTTSPQSVCVCGGQPRAPQLRCHLCKDWFHGGCVPFPSLLPCSG
PPINRLCWWDWDSRFLCPQCQRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAIT
WQGRAKEALETPELQQALQRLQELKESLQYAADKDDGEDVEKETEGTSVIVLSDSDGGEG
EDGVIDLTQENSPKKKTKESNGTQAGYENGFSKKSNVTGVESLLPLPPLLKGRVVELPPA
TRVRLEELQLEGDLLEVSLDQTQTIFRVLQAASDPPRETLHTLIQIELEEQRRTSRGRPK
DSKRKRKGHRGGCGEGAGEQSLDVAKSKKTCPLRHSLSPHPQVQTHPEVL
NT seq 4833 nt   +upstreamnt  +downstreamnt
atggaaggggaagagttcatagctcctccggagtgtccagtgtttgagccgtcatgggag
gagtttcaggatcccctgggctacatcgccaagatccgtccgattgcagagaaatctgga
atctgcaaaattcgacccccaccagactggcagccacctttttcagtggagctggacagc
ttccacttcacaccccgcatccagaggctaaatgagttggaggccgagaccagagtgaag
ctcaattacttggaccgcattgccagattttgggagatccaaggatcttccttaaaaatc
ccacatattgaaaggcgcattctcgatctcttcagcctgtctaaggttgtgacggatgaa
gggggttttgagatggtctgtaaggaacggcgctgggctcgcgtagcccagaggcttggc
tacccgccaggcaagaacattggttctctgctgcgctcgcactacgagaggattgtctac
ccctttgaaatgttccagtccgggtcaagccttccgccgtgcaagccaaagcactatgac
ggcgaagatgtggataaagagtacaagcctcactctatccccctgcggcagtctgtgcag
ccatccaaaatgagcagttacggacgcagagcaaaccggtgccagcccgatggtccagag
gatctgcccccccatcctctcaccactggctctcaactcatctctgcgcctgaacctaca
gaggaagacatagagaagaaccccgagttgaagaagttacagatctatggtgcagggcct
aagatgatgggacttggactggtggcaagggacaaaggtatgaggaagaaagatgaactg
cctcaaacggttaccgtcaaggatgatgtgtctcctgcttctggtgatatgaccatcaaa
agtgaaccagtggagcctgaagagaggcaaagtgatgggggcaccttccacccccagcca
cctcccccaagtcttacagttaagccagtagtgaagaaagaagaagtgaagcaggagaat
gggaaagagagtaatggggagggagatcatacagatggaccttgcaccaaaatgaccatg
aggcttaggcgcaatctcaccaacccgcagtgtgtaagtaccgcagtggatgcaagattg
atgacattgaattaccgtgagaaggtggattcttttgtctgtcggatgtgtggtcgggga
gacgacgacgacaaactcctgctgtgtgacggctgtgatgacaactatcacacttactgt
ctcctgcccccactcgctgatcccccgaaaggcaactggcgatgccccaagtgtgtggca
gaagagtgcaagaaaccggcagaagcgttcggctttgaacaagcaacaagagagtacact
ctgcagagttttggggaaatggcagatgctttcaaagcagattacttcaacatgcccgtc
catatggttcccactgagcttgtggagagagagttctggagattagtcagtagtattgag
gaagacgtgactgttgagtacggcgcagacatacactccaaggagtttggcagtggcttc
ccgatgaacaatggcaaaaggacgctgacaaaggaagaggaggaatatgcccgctgcggc
tggaacctgaatgtgatgcctgtgctggagcagtcactcctgtgccacattaatggagac
atctctgggatgaaggtgccgtggctttatgtgggcatggtgttctcggccttctgctgg
cacattgaggatcactggagctactccattaactacctgcactggggtgagcctaagacg
tggtatggggttccctccgtggcagctgagcgacttgaggaggtcatgaagaagctgaca
ccagaactgtttgagttccagcctgacctcctgcatcagctcgtcaccattatgaacccc
aatatcctcatgtctcatggtgtaccggttgtccgcaccaaccaatgtgctggcgaattc
gtcatcactttccccagagcctaccacagcggttttaaccagggttataactttgctgaa
gcggtcaacttctgcactgcagattggctgcctgccgggcgttcctgtattgagcactac
cggcgtctgaggaggtattgcgtcttctcccatgaggagctcacctgtaaaatggctgcc
agcccagagaagcttgacctgaacctggctgcggctacacatcgagagatgttcataatt
gttcaggaggagaggaagctgcgcaaaagtctgatggaaaggggcattacagaagcggag
cgggaggcttttgagctactgcctgatgatgaaagacagtgcgataaatgtaagaccacg
tgtttcctctctgctctggcctgctcaaactgtcctgaacgtctggtgtgtctctatcac
actcaagatctgtgcaactgccccactgaaaaactctacctcaggtacagatacaccctg
gatgaattgttaaccatgttacatcgattaaaagtccgctctgagtcctttgattcctgg
gccaacagagttaaagaggctcttgagcaggaagagggaaacaagatagaaattcatgac
ctggagaagctgaagatcgaagcaacagagaaaaagttccctgataatgaacttctcagg
aaactcaacggtgttctgaaagacataggatgctgccaacagactagtgctgagctcctc
agtaattcaaagagcagtgaaagcaggatgactttggcagagctgaagtctttggtcgag
aagatgcaaaaccttccctgtgtaatgaacccgttgaaggaagtgcaggtggttttaaag
atagtggaggatttccaaaaagaggctcaatcgctggtcaataaggactggaggaaggac
gcgccaccccctgagcagctgcaggctttgttggagcaggggggcaagatgcccgttgtg
gtgccggagtgtaaattactccagggtcttaaggagcaaggccattggctggaagaggtg
aggcgcaccctgggcaccgaaggaggggagaggcgagaagtgacgttggacgtgttgagg
aacctaatggaagccggctgcaacgtgccccagagtgtgtctgtggagacggccatggct
gagctgcaggagctgctcactatagctgaacgttgggaggagaaagcacagatctgctta
gaacagaggcaaaagcatcctctctccaccctggaggcgatagtaaatgaggcccagctc
atcccagtcacactccccaatattctggcgctacaaggctgcctaacacgagctcgggcc
tgggtgacagacctggaggaaatccagaatggagagcattatccatgtctggatgacctc
gagggcctggtagctattggaagggacttaccagtcttcatggaagagttgaggcagctg
gaactgcaggtggccagcgctcactcctggagggacaaggccagcaagaccttcctgaag
aaaagcagtcagcacagtctgctggaggtgttatgtccgtgtgcaaaaaggagagagagg
cgagacgaggccgagtcagtggacgatcctttagatgattctgataccaacactttgggg
ctttctgctcaggacctgagggaccctgcagctattgtaatggcattcaaagaaggggag
caccaggagaaggatgctctactgaggttacagaaagtgaacatgtgtaaatctggactt
aacactgcgagtcataaggagaacgggcggtgggatgacgccatggagacggacacatct
agccattccgagaactctgtcaaagagaacggtaacagtaaccacagctgcaccacctct
ccacagtctgtatgtgtgtgcggcgggcagcctcgcgcgcctcagctccgctgccacctg
tgtaaggactggttccatggtggctgtgttccttttccctccctgctgccctgttctgga
ccacctatcaaccgtctatgctggtgggactgggattcgcgcttcttgtgccctcaatgc
cagcggtcacggcgtccgcgcctggagactattctggcattactcgtggccctgcagagg
ttgcccgtgcgtctgcctgagggagaagcgctgcagtgtctcacagagagggccatcact
tggcagggtcgagccaaggaggcactggagaccccagagctgcagcaggcacttcagagg
ctgcaagaactcaaggaaagtctccagtatgccgcggacaaagatgatggggaagatgtg
gaaaaggagacggaagggacttcagttattgttctatcagactcagatggaggggaagga
gaggatggagtcattgatctaacacaggagaattcacctaaaaagaaaaccaaggaaagc
aacggcactcaggctggatatgaaaatggtttcagcaagaagtcaaatgttacaggcgtg
gagtctctgctgcccctgccgcctctactgaagggccgagtggtggagctccccccagct
accagggtccggctggaggagctgcagctggaaggagatctgctggaggtgtccttggac
cagacacagaccatcttcagagtcctgcaagctgcctctgatccacccagagaaacgctg
cacacgctcattcagattgagcttgaagagcagagacgaacgagccgcgggcgacccaag
gactccaagaggaagagaaagggccacagaggtggctgtggggaaggagcgggggagcag
tctctggatgtcgcaaagtcaaagaaaacctgtcctctcagacacagcctttcccctcac
ccacaggtccagacccatccagaggttttgtga

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