Leuresthes tenuis (California grunion): 140274516
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Entry
140274516 CDS
T11698
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
ltu Leuresthes tenuis (California grunion)
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ltu00535
]
140274516
Proteoglycans [BR:
ltu00535
]
Extracellular matrix (ECM) proteoglycans
Others
140274516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Fn3_VIN3
Pur_ac_phosph_N
Fn3_ROS1
Fn3_PBP1
Fn3_Dep-1_3rd
Fn3_nematode
VWA_3
DUF4959
Ig-like_NNF2
DUF4998
Pga1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
140274516
NCBI-ProteinID:
XP_072225909
LinkDB
All DBs
Position
Unknown
AA seq
1870 aa
AA seq
DB search
MHFSVRLSLCLLGFALITVFPHSAQGQVSSPRRFRAKVLSPKKLDVSWKEPKGEFESYKV
VYTAKPGGEQKVVQLSKQETKLTIEDFDSSKEYSFKIIAVKGGQESKPLQGKHEAQQSGV
ELAQSQRRQSSDVTQENNEISEAEEGFLCKTPAVADIVILVDGSWSIGRINFRLVRTFLE
NLVRAFSVEFDKSRIGLAQYSGDPRIEWHLNAHTSKEAVIDAVKNLPYKGGNTLTGLALT
FILENSFKVESGSRPGVPKIGILITDGKSQDDVIPPAQSLKDAGIELFAIGVKNADENEL
KAIASPPEETHVYNVADFSVMSDIVEGLTKTICDRVDQLDKQIKGEGKPAPPPTPVAPPR
DLVTSEITARSFRVTWTHAPGQVEKYRVVYYPASGGQPEEKMVQGMESSVELNYLNSLTE
YQVAVFAVYRSSASEALRGSATTLALPTVNDLELFDITHSTIRVRWKTAVGASGYMILYA
PLTEEDLADEKEVKVASSVNEVELEGLTPATEYTVTVYAMYGEEASDPMTSQQTTLPLIP
ARNLRFSEVDHSSARVTWDSASRLVRGYRIMYVKTSGVQTNEVDVSTVTSYLLKNLTSLT
EYTVGVFAIYDEGQAEAVTESFTTKTVPDPLDLKSTDVSTDSFRVSWRHPASDVVLYRLI
WTPTDGGDSEEVMVNGNVNTYLITGLSPSSEYEVLLAAIYANDVESDEEVLVETTAKKTT
TIATTTTTTATPRYGVKNMKIDEETTFSMRVSWQAVDARNIRHYRLIYVSARGDRAEETR
TVPTGQNSLVLQPLLSDTEYKVTITAVYSEGDGPTASEMGRTLPLSAPKNLRVSEEWYNR
FRISWDVPPSPTMGYRIVYQPLSAPGPALETFVGEDVNTMLIVNLLSGTEYSVKVIASYT
TGSSEALSGRAKTLYLGVTNLSTYQVRMTSVCIQWQPHRHASAYRVAIQSLLRSQRQETT
LSGGSSRHCFNNLKPNTEYKISVFAQLQDGTEGPAVTATVKTLPIPTPAPTKPPTTTPPP
TIPSAKEVCKAAKADLVFLVDGSWSIGDENFLKIIRFLYSTVGALDRIGPDGTQVAISQF
SDDARTEFKLNSYSNKERLLDAINKISYKGGNTKTGRAIQHVKENIFTAEGGVRRGIPNV
LVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDA
FQKIEEKLVTFVCEAATATCPSIPMSGSTTPGFRMMELFGLVENRYNSISGVSMVPGTFN
AFPCFHLQNDALLAQPTRYIHPEGLPSDYTIILLFRVLPDTPEEPFALWEILNKNNEPLV
GVILDNGGKTLTFFNNDYKGEFQTVTFEGPEVKKLFYGSFHKLHIVIGKTSAKVFIDCKM
VAEKTVNAAGNITTDGVEVLGRMVRSRENKDNSAPFQLQNFDIICSTSWASRDKCCELPG
LRKEVDCPALPKACTCTQDSKGPPGPPGQPGGPGIRGARGDRGEPGPVGPAGAVGDTGLP
GPQGPPGPQGPSGRSIIGPPGAPGERGQKGDIGQQGSQGVSGRPGVQGREGAAGPRGLPG
KDGPPGRQGPPGPIGTPGAPGSPGNTGPQGKQGELGPPGPAGSKGEKGERGDLQSTASVQ
DIARQVCEQLIQSHMARYNSILNHVPSPPVSIRTVPGPPGEPGRQGPAGPQGEQGPPGRS
GFPGQNGQNGNPGERGQSGEKGEKGSSGIGVQGPRGPPGSPGVQGQGRPGSQGPSGRPGN
PGSPGRPGVPGPVGPPGPPGYCDQNSCVGYNVGEGEDNTDGGAVPPVQLPSNVFQNYGEV
EEDDPYRYYQPNYPAPQPVSPDDPALALDDIELRSPGVHRSSRSVAAEEEKVGPKRRLKR
SGKMLPGLTN
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgcacttctcagtcagactgagcctctgcctgctgggctttgctctcatcactgtgttc
cctcattcagcacaaggtcaagtttcgtcaccacgaagatttcgtgcaaaagtcctgagc
cccaaaaagcttgatgtgtcatggaaggaaccaaagggagaatttgaaagctacaaggtc
gtttacaccgcaaaaccaggtggagagcagaaggtggttcagctatcaaagcaggagaca
aagctaaccatcgaagactttgactcctctaaggaatacagctttaaaatcattgcagta
aaagggggacaggagagcaaacctcttcagggcaagcatgaagctcagcaatcaggtgtc
gaattggctcagtcccaaaggagacaaagcagtgatgtcacgcaggagaacaatgagatt
tcagaagctgaagagggatttctgtgcaagactccagctgtagctgacatcgtgattctg
gtggacggctcatggagcattggccgcatcaacttcaggctggttcggaccttcctggaa
aacctggtcagggccttctctgtggagtttgacaagtcgaggattggcttggcccagtac
agtggagaccccaggattgaatggcatttaaatgctcacaccagcaaagaggctgtgata
gatgctgtaaagaacctgccgtacaaaggaggaaacacattgacaggtctggctctgacc
ttcatcctggagaacagtttcaaagtagagtctgggtccaggcctggtgttccaaagatt
ggaatcctcatcaccgatgggaagtcccaggatgatgtgattccccctgcgcagagcctg
aaggatgctgggatagagctgtttgccatcggtgtgaaaaacgctgatgagaatgagctg
aaggccatcgcctctccccctgaggaaactcacgtctacaatgtggcagacttcagtgtg
atgagcgacatcgttgaaggtctcaccaagaccatctgtgaccgcgtggatcagctcgac
aaacagatcaaaggtgaaggaaaacctgcccctccacccacccccgtggctccacctcgt
gatcttgtgacatctgagattacggctcgcagtttccgagtgacatggacccacgccccg
ggccaggtggagaaataccgtgtggtttattaccccgccagcggaggacaaccagaagaa
aaaatggttcaggggatggaaagcagcgtggagcttaactacctaaactctctgacggaa
taccaggtggctgttttcgccgtctaccgcagctccgccagcgaggccctgagaggaagt
gccaccacattggctctgcccacagtcaacgacctggagttgtttgatatcactcacagt
accataagggttcgctggaagactgccgtcggcgcttcagggtatatgatcctgtatgcc
ccgctgactgaggaagaccttgcagacgagaaggaggtgaaggtggcctcttctgtgaat
gaggtggagctcgaaggattgactccagctactgagtacacagtaacagtttacgccatg
tatggagaagaggccagtgaccccatgaccagccagcagaccacattaccgttgattcca
gcaagaaacctgcgtttctcagaggtggaccacagctctgcccgtgtcacttgggactct
gcttccagattggtcagaggctaccgcatcatgtacgtcaagaccagtggagtccagacc
aatgaggtggatgttagcactgtgacgtcgtatttgcttaaaaacctgacctccctgaca
gagtacacagttggtgtctttgctatctatgatgaaggacaagctgaagcagtgacggag
agctttaccacaaagacagtcccagacccgctggatctgaagagcactgacgtctccaca
gacagcttcagggtgtcatggcgacaccccgcctctgatgtggtattgtatcggctcatc
tggacacccacagatggcggagatagcgaggaggttatggtgaatgggaacgtgaacaca
tacctgataacgggactaagtccctcctcggagtatgaagtcctcctggctgccatctat
gcgaatgacgtcgagagtgatgaggaggtccttgttgaaactactgcgaagaaaacaacg
accatcgctacaacgacaacaacaacagcaactcctcgttacggggtgaagaatatgaag
attgatgaagaaaccacgtttagtatgcgggtgtcctggcaggctgtcgatgccagaaac
atcagacattatcgactgatctatgtcagtgcgaggggagaccgagcagaggaaacgagg
actgtgcccactggtcagaatagcctggttctgcagcctctcctgtcagatactgagtac
aaagtcacaataaccgctgtttattctgagggagatggaccaactgcctcagaaatggga
cggacacttcctctttcagctcctaagaacctgcgggtgtcagaggaatggtacaaccgc
ttcaggatcagctgggatgttccaccttcaccaaccatggggtacaggatcgtctaccag
cccctttctgcccctggaccagctctggagacctttgtcggggaggatgtgaacaccatg
ctgattgtcaacctactgagcggaacagagtacagtgtcaaagtcattgcatcctacacc
actggatccagtgaggccctctcagggagggcaaagaccttgtaccttggggtgacaaac
ctgagtacatatcaagtgaggatgaccagtgtgtgtatccaatggcagcctcatcgacat
gccagcgcctacagagtggccattcagtcgctgcttcggagtcagaggcaggagaccacg
ctgagtggaggatccagtaggcactgtttcaacaacctgaaacccaacacagagtataag
atcagtgtgtttgctcagctgcaggatgggactgaaggacctgcagtcactgcaactgtg
aagacattaccgatcccgacgccggcaccaacaaagcctcccaccaccaccccaccaccc
acaatcccctctgctaaggaagtttgcaaggcagccaaagcagacctggtcttcctcgtt
gatggttcttggagtatcggtgatgaaaacttcctgaagatcatccgtttcttgtacagc
actgttggagctctcgacaggatcggaccagatggaacacaggtggctatctcccagttt
agtgatgatgcccggactgagttcaagctgaactcatacagcaacaaggagcgtctgctg
gatgccatcaacaagatctcctacaagggaggaaacaccaagacaggtcgagccatccag
catgtgaaggagaacatcttcactgcagagggaggagtcaggagggggatccccaacgtc
ctcgttgttcttacagatggtcgatcccaagatgacgtcaacaaagtttccaaagagatg
cagatggaaggttacattgtgtttgcaatcggcttcgctgacgccgactatggggagctg
gtgagcatcgccagtaagcccagcgacagacacgtcttcttcgtggatgacctggacgcc
ttccagaagatcgaagagaagctggtgacctttgtgtgtgaggccgccactgccacctgt
ccgtctataccgatgagtggcagcacaactccaggtttccgtatgatggagctgtttggg
cttgttgagaatcgatacaacagcatctcgggtgtttccatggttcctggcacctttaat
gcttttccctgtttccacttgcaaaatgatgctctgctggcacaaccaacaaggtacatc
caccctgagggacttccttctgactacaccatcattctgctgttcagagtgctgccggat
actcccgaggagcctttcgccctctgggagatcctcaacaagaacaacgagccactggtt
ggagtcatcctggacaatggaggaaaaactctgacattcttcaacaatgactacaaagga
gagtttcagacggtcaccttcgaaggaccagaagtcaaaaagctattctacggcagcttc
cataagcttcatattgtaatcggcaagacgagtgccaaagtgtttattgactgcaaaatg
gtggcagagaaaactgtcaacgcagcgggaaacatcaccactgatggagtggaagttctg
ggcaggatggttcgctccagagaaaacaaggacaactcggcaccgttccagctccagaac
tttgacataatctgcagcacatcgtgggccagcagagacaagtgctgtgaacttcctggt
ctgaggaaggaggtagattgcccggccttgcccaaagcctgcacctgcacgcaggacagc
aaaggcccccctggccctcctggacaaccaggaggccctggaatccgtggggccagaggt
gatcgtggagagccaggcccagtgggcccggccggggccgttggagatacaggtttacca
ggacctcagggaccccctgggccacaagggccaagtgggcgctccatcattggacctccg
ggcgctccaggagagagggggcagaaaggtgatatcggacaacaaggatcgcagggagtt
tctggaagacctggagttcaggggagagaaggcgctgctggacccagaggacttccaggc
aaagatggcccaccaggcagacagggcccccccggaccaattgggactccaggagctcca
ggatccccaggaaatacaggccctcaaggaaaacaaggagaactgggaccaccgggtcct
gctggaagcaagggggagaagggtgaacggggtgacctccagtctacagcatcagttcag
gacatcgccaggcaggtctgtgagcagctgatccaaagccacatggcgcgctacaactcc
atccttaaccatgtgcccagtccaccggtgtccatccgcacagtgcctggaccccctgga
gagcctggccgacagggacctgcaggaccccagggagaacagggaccaccaggaagatcg
ggcttcccaggacagaacgggcagaacggaaacccaggagaacgaggtcaatcaggagaa
aagggtgagaaaggatcttcaggtattggtgtccaaggcccaagaggacctccaggatct
cctggtgtccaaggacaaggcagacctggcagccagggtccatcagggcgacctgggaat
cctggatctcctggtcgtcccggagttcctggaccagttggccctccagggcctccggga
tactgcgaccagaactcctgtgtgggctacaatgttggagaaggtgaggataacactgat
ggtggcgctgtccccccagtccaactgccgtccaacgtctttcaaaactacggtgaggtc
gaggaggatgacccataccgctactaccaacctaactacccagccccgcaacccgtgtca
cccgatgaccctgcgcttgcacttgacgacattgagctgaggtctcctggtgtgcaccga
agttcccggagcgtagctgcggaagaagagaaagttgggcccaagaggagactaaagaga
agtgggaagatgctgcctggactaactaactga
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integrated database retrieval system
