Leuresthes tenuis (California grunion): 140275325
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Entry
140275325 CDS
T11698
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04510
Focal adhesion
ltu04512
ECM-receptor interaction
ltu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140275325
04518 Integrin signaling
140275325
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140275325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ltu00536
]
140275325
Glycosaminoglycan binding proteins [BR:
ltu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140275325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
fn3
hEGF
EGF
EGF_PEAR1L
FN3_Tor_3rd
DUF7949
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_integrin
Fn3_PBP1
Big_5
Ig_J
PRR11_2nd
EGF_laminin
Motif
Other DBs
NCBI-GeneID:
140275325
NCBI-ProteinID:
XP_072226871
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MLPLIPSLLLLLLLAGPALLTPSTSRELQIRGQRRPRDTAQDSIKVVISEGCATQGDSSG
VSQGDKEIDLAPGSPLVLTHKIKLVPSGSGSCGCEADFAALRERLERLEREVSELREKCG
GAHGSCCTSESKGAGCSIKPETDECPNECSDQGRCVDGKCVCFPGYSGPDCSDSTCPGNC
NDHGRCVNGQCVCDPGFSGPDCSQAACPDNCNNRGRCVNGRCVCSSGFTGPSCSDKACPG
NCNKRGRCVNGQCVCNPGFTGPDCSKKACPDDCNNRGKCVNGKCVCDDGFTGADCSEIAC
PGNCNNKGRCINGQCVCDDGFTGADCSEIACPGNCNNRGRCVNGQCVCDDGFTGEDCSEI
ACPGNCNNRGRCVNGQCVCDDGFTGEDCSEIACPGNCNNRGRCVNGQCVCDDGFTSEDCS
EIACPGNCNNRGRCVNGQCVCDDGFTGEDCSERACPNNCSKRGKCVNGKCICDVGFTGPD
CAAKGCPNNCNNKGRCVKGRCVCRRGFTGEDCSQCQEGMTGPNCDIAMSGVSQLSTQDIT
ETSVTLAWTPPPVQYETYYITFTSKKESDQQIAVQVEGSLTTFTQMGLAAGQEYSVSIIG
EINGRRGAESSTEFMTLISGPTNLQVVKTTSTSAVVQWEQSQGEIDRYRLTISPNDGEGR
SQEMTVAAGQNSAHIRQLEAGRLYDILLIAEKGLSQSKPATTQAVPGPEPPSNIVFSKVT
ENSLTVSWTKPKSPVSGFKVTYTHADEGEPVSVSVGSEDSILDLSQLSPGSSYEVNIIST
LGLDESDPIKDSVMTLPDPPTSLQAMNVTDTTALLVWRPALAAIDKYAIVYGSGTGSELR
ITVSGNAAEKQLSGLEGSTTYTVTITSQLGNLESSPATTSFTTTSARDKGGLRDLQASNV
TPRTAMLSWKRPSKPVPSYILTYKTEGQEIKEVIVDGTITQYNLTKLHPGSLYTVQLQAG
GGGARYTSTISTEFTTGTLRFPFPTDCSQELLNGIRTSGVVEIFPKGKLGAPIMVYCDME
TDGGGWMVFQRRKDGSVDFFRGWKEYLKGFGDLNGEFWLGLENLHNLTTMTKMILRVDLR
DESESVFAKYSSFEVAKRNYKLTVGGYSGTAGDSLSYHNNRVFSTKDRDPAPFITRCAMS
YRGGWWYKNCHEANLNGLYGIDVKHQGVIWTSWKGKEHSIQFTEMKMRPAAFSPPARG
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctcattccttccctcctcctcctcctcctcctggctggcccggccctcctg
actccgtcaacctccagagagttacagattagaggtcaaaggagaccaagggacaccgcg
caggactccatcaaggtagtgatctcagagggatgtgccactcagggagattcatctggt
gtgagccaaggagataaagagattgatctggctcctggctctcctctggtcctgacccat
aagatcaaactggtcccatcgggatccgggtcttgtggctgcgaggcagactttgctgcc
ctgcgggagcgtctcgagaggctggaaagggaggtgtctgaactccgggagaagtgtgga
ggagctcatggaagctgctgcacctccgaaagcaaaggtgctggatgctccattaaacca
gagactgacgaatgtcccaatgagtgcagtgatcagggacgctgtgtggatggcaagtgt
gtctgcttccccggttacagtgggccggactgcagtgactccacctgtcccgggaactgc
aacgaccatgggaggtgcgtgaatggacaatgtgtgtgcgatcctggtttttctggtcct
gactgctcccaagcagcctgccccgacaattgcaacaaccggggcaggtgtgtcaatggc
aggtgtgtctgcagcagtggtttcacaggtcccagctgctcagacaaagcctgtcctgga
aactgcaacaaaagggggcgctgcgttaacggacagtgtgtgtgtaatcctggattcaca
ggtccagattgctcaaaaaaggcctgtcccgatgactgcaacaaccgtggcaaatgtgtt
aatggaaaatgtgtttgtgatgatggattcaccggtgcagactgctctgagattgcctgt
cctggaaattgcaacaacaaggggcgctgcatcaatggacaatgtgtttgtgatgatgga
ttcaccggtgcagactgctctgagattgcctgtcctggaaactgcaacaacagggggcgc
tgcgtcaatggacaatgtgtttgtgatgatggattcaccggtgaggactgctctgagatt
gcctgtcctggaaactgcaacaacagggggcgctgcgtcaatggacaatgtgtttgtgat
gatggattcaccggtgaggactgctctgagattgcctgtcctggaaactgcaacaacagg
gggcgctgcgtcaatggacaatgtgtttgtgatgatggattcaccagtgaggactgctct
gagattgcctgtcctggaaactgcaacaacagggggcgctgcgtcaatggacaatgtgtt
tgtgatgatggattcaccggtgaggactgctctgaaagagcttgtcccaacaactgcagc
aaacgcgggaagtgtgtgaacggaaaatgcatttgtgatgttggcttcactgggccagac
tgtgctgccaaaggctgtcctaacaactgcaacaacaaaggaaggtgcgtcaaaggaaga
tgtgtatgccggcgtggattcactggagaagactgcagccagtgtcaagagggcatgact
ggacccaactgtgatattgccatgtcaggagtctctcagctgagcactcaggacatcaca
gagacatctgtcactctggcttggactccacctcctgtccagtatgagacttactacatc
accttcaccagcaagaaagagagcgaccagcagatagctgtgcaggtggagggcagcctg
accaccttcacccagatgggcctggcagctggtcaggagtacagtgtcagcatcatcgga
gagatcaacggcaggaggggagctgagagctccactgaatttatgaccctcatctctggt
cccaccaacctccaagttgtcaagacaacctccacctcagcagtggtccaatgggagcag
tcacagggggagattgacaggtaccgtttgaccatcagccccaacgacggagaagggagg
agtcaagaaatgacagtagcagccggccaaaactctgctcacattcgacagttggaggcg
gggcgtttgtatgacatcttgctgattgctgagaagggtctgagccagagcaaaccagcg
accacacaggcagttcctggcccagaacctccatccaacatagtcttcagtaaagtgaca
gaaaactctttgacagtgtcatggaccaaaccaaaaagtcccgttagtggtttcaaagtc
acatacacccatgcagatgaaggtgagccagtgtcagtgtcagtgggctctgaggactcc
atcctcgacctgtctcagctctctcctggatcttcatatgaggttaacatcatctctacc
cttggactagatgaaagcgatccaatcaaagactctgtcatgacactccctgacccaccc
acaagcctgcaggccatgaatgtcactgacaccacagctttgttggtgtggcgtccagcg
ttggctgccatcgataagtacgccattgtctatggctctggtacaggttcagagttgagg
attacagtgtctggaaacgcagccgagaagcagctcagcggcctagagggatccaccacc
tacaccgtcaccataaccagccagcttggcaacctggagagttccccagccaccaccagc
tttaccaccaccagcgcaagggacaagggcggtctacgagacctccaggccagcaatgtg
acccctcgtacagctatgttgtcatggaaacggccatcaaaacctgttcccagttacata
ctgacctacaaaactgaaggtcaagaaataaaggaagtgattgtggatggcacgataaca
cagtacaatctgaccaaacttcatccaggatccctgtacacagtgcagctacaagcaggg
ggaggaggagcacgatacacatctacaatctccactgaattcaccactggcacgctcagg
ttccctttccccaccgactgctctcaggagctgctgaacggtatccgcacatcaggtgtg
gtggagattttccctaaagggaaactcggagcaccaataatggtttactgtgacatggag
acagatggtggcggctggatggtcttccaaaggaggaaagatggctcggtggatttcttc
cgaggctggaaggagtacctaaaaggatttggggacctaaacggagagttctggctcggc
cttgaaaatctccataacctgacgaccatgaccaaaatgattctacgtgtcgacctacga
gatgaaagtgagtcagtatttgcaaaatattcatcattcgaggtggccaagaggaactac
aaactgactgtaggtggatacagcggcactgcaggcgactctttaagttaccacaacaac
cgggtcttctccaccaaagaccgagacccagcccccttcatcacccgctgtgccatgtct
tatcgaggaggatggtggtacaagaactgccatgaagcaaacctgaacggcctctacggc
atcgacgtcaaacaccagggtgtgatctggacctcatggaaaggaaaagagcattcaatc
cagttcactgagatgaagatgagaccagcagccttcagccctccagccagaggataa
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