KEGG   Leuresthes tenuis (California grunion): 140276689
Entry
140276689         CDS       T11698                                 
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
ltu  Leuresthes tenuis (California grunion)
Pathway
ltu04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:ltu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    140276689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ltu04131]
    140276689
Membrane trafficking [BR:ltu04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    140276689
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML ASA1 CFAP251_N Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_ACSF4 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR19_1st WDR90_beta-prop_4th WDR72_alpha-sol PAC11 KNTC1_N PD40 Beta-prop_TEP1_C Tricorn_2nd zf-MYND
Other DBs
NCBI-GeneID: 140276689
NCBI-ProteinID: XP_072227588
LinkDB
Position
Unknown
AA seq 1493 aa
MSGNNLVLPIVLWSRTAPTHCISSLLVMDDFSTIITGCHDGQICLWDMTPELEICPRAVL
FGHTASITCLAKASACSDKQYMVSASESGEMCLWDVNDGRCIEFTKLACAHTGIRFYQFT
IGTQKEGRLLCNGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVSKMQDLDPVFEEESKPIYCQGCQSISFCSFTQRSLLVVCSKYWKV
FDAGDYSLLCSVPSENDQSWTGGEFIAADKVIIWMEDGCSCIYKLPASCLSASEHFRSDV
GKTKEGSIPPLIYRIADRSDKQLLICPPVTRFFFGRREPFHKLLIQGDSAGRLSLWSIPD
SSPPQPSAASTELQASSTISLQEAFDKLIPVSAGIIDQLSVMPGKEEPVKVTASVYIPSQ
GRLVCGREDGSIILVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCVLYPYQISP
RYDQRSLVSGGVDFSVIVWDIFTGEMKHIFCVHGGEITQLIVPPENCSTRVQHCVCSVAS
DHSVGLLSLRERKCIMLASRHLFPIQVIKWRPADDYLVVGCSDGSVYVWQMDTGALDRCV
MGITAVEILNACDELAPATVDALSHSAVNLKQAMTRRSLAALKNMAQHKLQTLATNLLAA
DNADKGNLPKYSHNALVVQAMKTNLTDPDMHVLFFDVEAMIIQLLTEEAQRPNPMLVSPE
TLQKSQAGADKGGSFLANKIFKQVKETMKETIKEHLLDEDEEEEEEMRRREEKSKSLSLL
EYNLTMDTAKLFMSCLHAWGLNEQLDGICLERLGMLRPHCPISFGLISRGGHMSLMLPTF
KESLLRQLSLATGRRLTLSDIVGKGTYGVSRAVTTQHLLSVISLANTLMGMTNATFVGEH
MKKAPARPPRPGGTPETPRRTPAAPSQPSNPALQAQIKQAAVAANTSTAATAGALGAPGG
LSQGAPGSPSPGPASHNIHSVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDR
CLEVREAAQALLLAELRRIGQSGRKDTIDIWASYLPQYVDTVSSPGTTTESSPPAPPPPE
AQPIETKAPEEELDVTDDDITAGCLSNLPPNAKKISNSYEERRKQATAIVLLGVIGAEFG
AEIEPPKGSVRARVGGQVPEGFGPTSGGSSNYSLARHTCKALTFLLLQPPSPKLPAHSTI
RRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLNPPADSARSARH
ALSLIATARPPAFITTIAREVHRYNAAQANSQSQQNVHTTTLARAKTEILRVIDILIEKM
PGDVVDLLVEVMDIIMYCIEGSLVKKKGLQECFPAICKFYMVGYCDRSHRIAVGARQGSV
ALYDVRTGKCQNIHGHKGPITAVSFAPDGRYLATYSNADSHISFWQMNTSLLGSIGMLNS
APQLRCIKTYQVPPVQPASPGSQNHLKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4482 nt   +upstreamnt  +downstreamnt
atgtcagggaacaacctggtactgcccatcgtgctgtggagccgcacggctcccacccac
tgcatcagcagcttgttggtgatggatgacttcagcaccatcatcactggctgccacgat
gggcagatctgtctctgggacatgacgcctgagctggagatttgtcccagagcggttctg
tttggtcacactgcctccatcacctgtctggctaaagccagcgcctgcagtgacaaacag
tacatggtcagcgcttctgagagtggggagatgtgtctgtgggatgtgaatgatggacgc
tgtattgagttcaccaagctggcctgtgcccacactggcatccggttctatcagttcacc
attggcacccagaaggagggacgtctgctttgcaatggccactatccggagattcttgtg
gtggacgccaccagcctggaggtcctgtactcgctggtctctaagatttctcccgactgg
atcagctctatgagcatcatccgatctcatcgcacccaggaggacacggtggtggcggtg
tcagtgacgggcattttgaaggtctggatcataacagctgaggtcagcaagatgcaggac
ctggaccctgtgtttgaagaggagtccaaacccatctactgtcagggctgtcagagtatt
tccttctgcagcttcactcagagaagtctgctggtcgtctgctccaagtactggaaggtg
ttcgatgcaggcgactactcgctgctctgctcagtgcccagtgagaacgaccagtcctgg
actggtggagagttcatcgctgcagataaagtcatcatctggatggaggacggctgcagt
tgcatctacaagctgccagccagctgtctgtcggccagtgagcatttccgcagtgatgtg
gggaaaaccaaagaaggatcaatccctccgctgatctaccgcatcgccgaccgctcagac
aaacagctcctgatctgtcctcctgtaactcggttctttttcggccggcgggagcctttc
cacaagctgcttatccagggagactcggctggaaggctgtctctgtggagcattcccgac
tcctcacctccgcagccatcggccgcttctacggagctgcaggcgtcatccaccatcagc
cttcaggaggcgtttgacaagctgatcccagtgtccgcggggatcatcgaccagctcagc
gtcatgccgggcaaagaggaacccgtcaaggtgacggccagcgtgtacatcccctctcag
ggccgcctggtgtgcggcagagaggacggcagcatcatcctggttcctgccactcagacg
gccatcgtgcagctgctgcagggggagcacatgctccggagaggctggccgccgcaccgc
accctgcggggtcaccggaacaaggtgacctgcgtcctgtacccctaccagatctcccct
cgctacgaccagcgctcgctggtgtcggggggagtggacttctctgtgatcgtctgggac
attttcaccggagagatgaagcacatcttctgtgtgcacggaggggagatcacgcagctc
atcgtcccgccggaaaactgcagcacccgggtgcagcactgcgtttgctctgtggccagc
gaccactcggtggggctgctgagcctcagagagaggaagtgcatcatgctggcgtcacga
cacctttttcccatccaagtcatcaagtggcgtccggctgatgattacctggtggtggga
tgttctgacggctcggtctacgtctggcagatggacacaggagctctggatcgctgtgtg
atgggaataaccgcagtggagatcctgaacgcctgcgatgagctggccccggccaccgtg
gatgctctgagccactctgcggtcaacctgaagcaggcgatgactcgccgcagcctggca
gcgctgaagaacatggcgcagcacaaactgcagacgctcgccaccaacctgctggctgca
gataatgctgacaagggtaacttgccaaaatactcccacaatgcactggtggttcaggcg
atgaagaccaacctgaccgacccggacatgcacgtgctgttctttgacgtggaggccatg
atcattcagctgctgacggaggaagctcagagacccaaccccatgctggtgtctcccgag
acgctgcagaagagccaggccggcgccgacaagggggggtccttcctggcaaataaaatc
ttcaaacaggtgaaggaaacgatgaaggagaccatcaaggagcacctgctggatgaagat
gaggaggaggaggaggagatgaggaggcgtgaggagaagtcaaagtctctgagtctgctg
gagtacaacctgacaatggacacagcaaagctcttcatgtcctgtctgcatgcctggggc
ctcaatgagcagctggatggcatctgtctggaacgactgggcatgctcagaccgcactgt
cccatctccttcggtttgatttccagaggaggtcacatgtcgctcatgctgcccaccttc
aaggagtctttgctgcgtcagttgtccctggccacaggtcggaggctcactttgtcggac
atcgtgggtaaagggacgtacggtgtgtctcgggccgtcaccacacagcacctcctgtcc
gtcatctcgctggccaacactctgatgggcatgaccaacgccaccttcgtaggagagcac
atgaagaaagccccggccaggcctcccagaccaggaggaaccccggagactcctcggagg
acgcctgctgccccctctcagccctccaacccggcgctacaggcccagatcaaacaagct
gctgtagctgccaacaccagcactgctgccactgctggggctctgggggctcccgggggc
ctttctcagggggcccctggctcccccagccccggccctgcttctcataacatccactca
gtcaacgaaggatggagccagctggccgccatgcactgtgtgatgctacctgatctcctc
ggcctggacaagttcagacctccgctgctggagatgttggcgaggaggtggcaggatcgc
tgtctggaggtccgggaggcagcacaagctcttctgctggctgagctaagaagaatcggc
caatcaggacgcaaggacaccatcgacatctgggcctcctacctgccccagtatgtggac
acagtcagctcccctgggaccaccactgagtcctcacctccagccccgccccctcctgag
gctcagccaatagaaaccaaagctcctgaggaggagctggacgtcacggacgatgacatc
acagcaggctgtttgtccaaccttccaccaaacgccaagaagatctccaactcctacgag
gagcgccgtaaacaggccacagccatcgtcctgctgggagtcatcggggctgaatttggc
gctgaaatcgaacccccgaaaggctcggtgcgagctcgagtcggcggacaggtgcccgaa
gggttcggaccgacgagcggcgggtcgtccaactactcgctggccaggcacacgtgtaag
gcgctgaccttcctgctgctgcagccccccagccccaagctacctgcccacagcaccatc
cgccgcactgcgatcgatctgattggccgaggctttaccgtctgggagccctatatggac
gtgtcagcggtgctcatgggattgctggagctgtgtgccgacgcagagaagcagctggcc
aacatcactatgggtttgcccttaaaccccccagcagattcggctcgctcggcacgtcac
gccctgtctctcatcgctaccgcccggcctcccgccttcatcaccaccatcgccagagag
gttcatcggtacaacgcagctcaagcaaactctcagtcacagcaaaacgttcacaccacc
actctggccagagctaagacggagatactgcgagtgatcgacatcctgatagagaagatg
cccggagatgttgtcgatcttctggttgaagtgatggatatcatcatgtactgtatcgag
ggttcgctggtaaagaagaaaggactgcaggagtgtttccctgctatttgcaagttttac
atggtgggttattgtgaccgaagtcaccgcattgctgttggagctcgccaaggctcggtg
gccctctacgatgtccgcactggaaaatgccagaacatccacggtcacaaaggcccgatc
acagcggtgtcattcgcccctgatggccgttacctagcaacctactccaacgctgacagc
cacatctccttctggcagatgaacaccagtctgctgggcagcattgggatgctgaactcg
gctcctcagctccgctgcattaagacataccaggttcctccggtgcagccggcctcgccg
ggatctcagaaccacctgaagctcgcccgcctcatctggacctccaaccgcaacgtcatc
ctgatggcccacgacggcaaggagcaccgcttcatggtgtga

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