Leuresthes tenuis (California grunion): 140278208
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Entry
140278208 CDS
T11698
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04514
Cell adhesion molecule (CAM) interaction
ltu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
140278208 (lrrc4bb)
04517 IgSF CAM signaling
140278208 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ltu04515
]
140278208 (lrrc4bb)
Cell adhesion molecules [BR:
ltu04515
]
Immunoglobulin superfamily
NGL family
140278208 (lrrc4bb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
DUF7617
Motif
Other DBs
NCBI-GeneID:
140278208
NCBI-ProteinID:
XP_072229259
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MRVVMVTSPRTPFPLFWLVQLLLWFHNHGPQLTEAAPPCPTPCTCSNQASRVICTRKTLD
QIPDSISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPALKGKYIGELDQTHFTCFAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVEPVRGEEENSARQYINETFIDFPNP
TVQRGLDGRPGITISPSLSSLSSLSPRANRAGENAVTVSIMDVTNIPGLDDVMKTTKIII
GCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTMN
SGSGGEGTLRIHHPEIVNLPNIGRTDTLNHYYKTHHFNNNVMGLSIGTEGMGPGGIISSK
NQHVQDIPISCTSVPISTSNLLATSGNGINTNPSSLSPPLPMSLPMPTMGLHGSIKGFMG
QNQNPQMEPLLFKGSSKENVQETQI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgactagcccccgcacccctttccccctcttctggttggtccag
cttttgttgtggtttcacaaccatggacctcagctgacagaggcagcacccccttgcccc
accccctgtacctgctccaaccaagcaagccgtgtcatctgtacaaggaagactttagat
caaatcccagacagtatttcagagaacacaagatacctcaatctacaagagaactcaatt
caggtgatcaagtctgacacatttaagcatctgaggcatttggaaattctccagctatcc
aaaaaccacattcggcagattgaagtgggagcctttaatggtcttcccaacctaaataca
ttggagctttttgacaaccgtcttacagtggtaccatctcaagcctttgagtacctcagc
aagctaagggaactatggttacgaaacaaccccatagagacgctgccggcctttgccttt
catcgtgttccctctttacgacgtctcgatctaggggaacttaggaagctggatttcatc
tcagaggctgcctttgaaggtctggtaaatttgcgttttttgaatcttggtatgtgtggc
ttgaaggacatccctaaccttaccccactagtgagactagaggagttagagctgtcaggg
aaccagcttgggatcgtccgacctggatcctttcagggtctagtgtcacttcgcaagctg
tggctaatgcactccagagtgtcagtcattgaacgtaatgcttttgacgacctgaagaac
ttggaggagctcaatctttcccacaattccctgcattccctgcctcatgatctgttcacc
cctttgcaccagttagagagggtgcatctcaaccacaacccttgggtctgcaactgtgat
gtcttgtggctcagctggtggctgaaagaaacagttcctagcaacaccacatgttgtgct
cgttgccatgcccccccagctttgaagggtaaatacattggagaactagaccagacccac
tttacctgctttgccccagtgattgtggagccacccactgacctcaatgtcacagagggc
atggctgctgagctgaaatgtcgtactggtacctcaatgacctcagtgaactggttcact
ccaaatggcactctgatgacacacggatcataccgagttaggatttcagtacttcatgac
ggaacactgaacttcacaaatgtgaccgtgcaggacactgggcagtatacttgtatggta
accaactctgctggaaataccactgccactgccgtactcaatgtttctgcttctgacccc
agcaacagttacagctatttcaccactgtcactgtagaaacggtagaaccagtaagagga
gaggaagagaactcggcaagacagtatatcaatgagaccttcatagatttccctaatcct
actgttcagagagggttagatggtcgacctggcatcactatatcgccttctctctcatct
ctttcctcgctgtcaccaagagctaacagagcaggtgaaaatgcagtgactgtgtctata
atggatgtaactaacattcccggcctggacgatgtaatgaaaacaactaagatcatcatt
ggttgttttgtggccattacttttatggcagctgtaatgttggtggtcttctataaactt
cgtaagcagcaccaactacacaagcatcatggcccagccagagccattgaaattgtcaat
gtagaggatgagattggagccggggccggaagtggcatctcaggtggttcaacaatgaat
tctggttctggtggagaaggaacgctaagaatacatcatccagaaatagtcaaccttccc
aacattggccgcacggataccctcaaccattactacaaaacacaccatttcaacaataac
gtgatgggtcttagtatcggtaccgaagggatgggaccaggggggatcatcagcagcaag
aaccagcatgtccaggatattcccatctcgtgtacctcagtcccaatctcaacatcaaat
ttgctcgccacatcaggcaatggcatcaacaccaaccccagctctctttcccctccactt
ccaatgtctctccccatgcctactatgggcttacatggatcgatcaaaggtttcatgggc
caaaaccagaatcctcaaatggagcctcttctctttaaggggagctcaaaggaaaacgtc
caagagactcagatctaa
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