Leuresthes tenuis (California grunion): 140279239
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Entry
140279239 CDS
T11698
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ltu04514
Cell adhesion molecule (CAM) interaction
ltu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
140279239 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
140279239 (ncam1a)
04517 IgSF CAM signaling
140279239 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ltu04131
]
140279239 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ltu04515
]
140279239 (ncam1a)
04090 CD molecules [BR:
ltu04090
]
140279239 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
ltu00536
]
140279239 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ltu00537
]
140279239 (ncam1a)
04091 Lectins [BR:
ltu04091
]
140279239 (ncam1a)
Membrane trafficking [BR:
ltu04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
140279239 (ncam1a)
Cell adhesion molecules [BR:
ltu04515
]
Immunoglobulin superfamily
NCAM1/2
140279239 (ncam1a)
CD molecules [BR:
ltu04090
]
Proteins
140279239 (ncam1a)
Glycosaminoglycan binding proteins [BR:
ltu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
140279239 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ltu00537
]
Others
140279239 (ncam1a)
Lectins [BR:
ltu04091
]
I-type lectins (Siglecs)
140279239 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Ig_PDGFR_d4
Ig_6
Motif
Other DBs
NCBI-GeneID:
140279239
NCBI-ProteinID:
XP_072230445
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MLQIRDIIWGLLVIGCAAAIQVQITPNQGEISMGDSKFFLCEVVGNAKEIDWYAPSGEKI
HSSGQDLSVSRTDEATAVLTIYHANIDSAGIYKCVAKNGDKEAQATVQVKIFQKITFQSA
PSPQEFNEGEDADIVCDVVSSPPPTVIWKHKGSVIEAAKDVRYKIMDNGHLQIRSIKKTD
EGMYTCEARVMARGEIDFKMMKVVVNVLPTIRARQPDVNATADIGSSALLACDADGFPEP
TVTWTHNSIVLETGDKYSLNEDGSELVIKDVKKVDEGDYNCIAKNKAGEKSEEVSLNVFV
QPKITFFNNQTASEFDEQVTLLCEAMGDPTPTISWSFGNRVFTEGEQASWTRPDKYESLD
RNVVVRSHARVSSLILKNVQYIYAGEYLCIASNSIGQDNQHIYLEVRYAPKILGRVTTYT
WEGNPANISCELEAHPRASVVWFRDGFQLPSPNATNMKIYSTPTISYLEITPDSQNDFGS
YNCTASNEMGTESKEFLLIQAEVPSAPEIQQVETFSSTAILEFEEPDSMGGVPIIKYRVE
WRLPGKEWTGNEYDAHDDMMVISIIGLKPETTYEVRMSAINGKGKGENSLASIFKTKPVR
EPTAPKLEGKVHNEGNSLKVTWIKQDDGGSPIKHYLVRYKAKHVSDWKPEIRLPYHSEYI
VLSGLDWNTEYEVLVVAENQQGKSAPGILSLRTTVEPTAIPDAMDGGSGLGTGAIVGILI
VVFFLLLVGVDVTCYFLNKCGLLMCIAVNFCGKAGPGAKSKDIEEGKAAFTKDESKEPIV
EVRTEEEHTPNQEGRGPTEPNETTPLTDPEPAAADTTPMVVNLLPSTTANSVTESLSTAQ
SSPASESTTLTISTSSPTKVAPTKSSPKNSTAPHPSLLKADPQPNVGPLVDLSDTPKVGP
SSMQTPLVIDSVAPPSANADGPQSKCDSVKAPDSTHSKDLQVDGPTKDAPNALCTDSTTP
AQNDGKTVKDDNTKNENEVKNASAEVKTVPNEAPQANGNESKA
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaataagggacatcatctggggattgctagtcattggctgcgcagctgctatt
caggtgcaaatcactccaaaccagggggaaatcagcatgggagactccaaatttttcctc
tgtgaagtggtagggaatgctaaagagatagactggtacgcccccagcggtgagaagatc
cattcatcggggcaagacctttccgtgagccgcactgatgaggccaccgcggttctcacc
atataccacgccaacatcgacagtgccggcatctacaagtgtgttgcaaaaaatggggat
aaggaggctcaggccactgtccaagtgaaaatcttccaaaagatcaccttccagagtgca
cccagtccacaggagtttaacgagggtgaggatgctgacatagtctgcgatgttgtcagt
tcaccgccacccaccgttatttggaagcacaagggctctgtgatcgaagctgccaaagat
gtacgttataagatcatggataatggccacctgcagatacggagcatcaagaagacagat
gagggcatgtacacttgtgaggctcgtgttatggccaggggagaaattgacttcaagatg
atgaaggtcgttgttaacgtgcttcccaccatccgggccaggcagcctgatgtcaatgct
acagcagacatcggtagttctgctttgctggcttgtgatgcagatggcttccctgaaccc
accgttacctggacacacaacagcatcgtccttgaaacaggtgataagtacagcctgaac
gaggatggttctgaattggtaataaaggatgtcaagaaggtggatgaaggagattataat
tgcattgccaagaacaaggcaggagagaaaagcgaggaagtcagcctgaacgtgtttgtg
caacccaagattaccttctttaacaaccagactgcatcagagtttgatgagcaagtcacc
ctgctctgtgaggccatgggtgatcccacacctaccatctcctggagctttggcaacaga
gtcttcactgaaggagagcaggcttcttggactcgaccagacaaatatgagagccttgat
aggaatgttgtggtacgcagccatgcaagggtgtcctccctcatcttgaaaaatgtccag
tacatatatgccggcgagtatctctgcattgccagcaactccatcggtcaggacaaccag
cacatttacttggaagtccgctatgctccaaagattctgggtagagtgacaacatacaca
tgggagggaaacccagccaacattagctgtgagttggaggctcaccccagggcctcagtg
gtttggttcagagatggcttccagctgccaagtcccaacgctaccaacatgaagatctac
agcacaccaaccatcagctacctggagattacacctgattctcaaaatgactttgggagc
tacaactgtacagcaagcaatgagatgggcactgaatccaaggagttccttctcatccaa
gcagaggtcccatcagcaccagaaatccaacaagtggaaactttctccagcacagcgata
ttagagtttgaggagcctgactccatggggggagtgcccattatcaagtacagagtggaa
tggcgtttgcctgggaaggaatggactggcaatgagtatgatgctcacgacgacatgatg
gtgatcagcatcattggcctgaaaccagagaccacctatgaggtcagaatgtccgctatc
aacggcaaaggcaaaggcgagaacagccttgccagcattttcaagaccaagccagtccgg
gaacccactgcccccaaactggaaggcaaggtccataatgagggcaattctcttaaggtc
acctggatcaagcaggacgacggaggttctcccattaaacattacttggtcagatacaag
gctaagcatgtatctgactggaaaccagagatccgcctgccctatcacagtgagtatata
gtgctgagtggcctggactggaatacagagtacgaggtccttgtggtggcagagaatcag
cagggaaaatctgcgcctggcatcctttccctcagaacaactgtggagcccactgctatc
ccagatgcaatggatggaggctctggactgggcactggagccattgttggcatcctcatc
gttgtcttctttctgttgttggttggcgtggatgtcacatgctatttcctcaacaagtgt
gggctcctcatgtgcattgcagtcaacttctgtgggaaggccggcccaggtgccaagagc
aaggacattgaggagggcaaggctgcattcacgaaagatgagtctaaggagcctattgtt
gaagttaggacagaagaggaacacactccaaaccaagaaggacgaggtcccactgagccc
aatgagaccactcctctgacagacccagagcctgctgctgcagacaccactcccatggtg
gtaaacttactcccctccactactgccaactcagttactgagagccttagcacggcgcag
agtagtcctgctagtgagagcaccacactaaccatcagcacttccagtccaaccaaagtg
gctcccaccaagtcctctcctaaaaacagcactgcacctcatcccagtttgcttaaagct
gacccccaacctaatgtcgggcccctggttgacctaagtgacacccctaaagttggccct
tcttccatgcaaacacctcttgtgatagactcagtcgccccaccctctgctaatgctgat
gggccacagagcaagtgtgactcagtgaaagcccccgacagcacccacagtaaggactta
caagtagacggcccaaccaaggatgctcccaatgccctgtgcacagactcgaccactcca
gctcaaaatgatgggaagactgtgaaggatgataacactaaaaacgagaatgaggtgaag
aacgcctcagcggaagtgaagacggttcccaacgaggctcctcaggcgaatggcaacgaa
agtaaagcgtaa
DBGET
integrated database retrieval system
