Leuresthes tenuis (California grunion): 140279654
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Entry
140279654 CDS
T11698
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03013
Nucleocytoplasmic transport
ltu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140279654 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
140279654 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ltu03019
]
140279654 (thoc2)
03041 Spliceosome [BR:
ltu03041
]
140279654 (thoc2)
Messenger RNA biogenesis [BR:
ltu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140279654 (thoc2)
Spliceosome [BR:
ltu03041
]
Complex C
Other components
EJC/TREX
140279654 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140279654 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
140279654
NCBI-ProteinID:
XP_072230910
LinkDB
All DBs
Position
Unknown
AA seq
1565 aa
AA seq
DB search
MATLTLPGEWIKNWEKSGKHEFVQLCKDLTEKPDHGSEIRADVQTALYQLCCQVVQGNLK
MELVTSVLGEMMELRDDMPSILADVFSILDIETSALEEKNKRDHYTHLVGACLCFVPEAI
LKERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQD
LSGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTL
CHILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPPDASIVEEHKRDIS
EAKQIARKLVMVTLPSEKSEDKEKEKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQSI
MDQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGVPKGARGCVLHPLRYKRAPRPAETF
EDLRRDTFSMLGYLGPHLSHDPILFAKIVRLGKAFMKEYQSDGKPELKDKLEILLSCFLS
IADQVLLPSLSLMECNACMSEEMWGLFKLFPYRHRYRLYGQWKNETYSGHPLLVKVKAQT
VERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLT
SLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVT
NQLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKS
SQRLKDVLLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLA
SNLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQK
VHKYVSACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHVAYDREVNK
LKVQIKAIEENPEIPLNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLRLEKDNWLL
AKSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAII
YTVASCTENESHRYGRFLCCMLETVTRWHSDRAVYEKECVNYPGFLTIFRATGFDGGNKV
DQLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALE
CRVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKDQPARSATPASQQNGP
GSTSKPATSTGKTEEGASEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAV
KERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERVAREGKEKTPKADR
EKVKPEEKGSKDDKAKAGNGEPMEPSRERDAVKESKSKEKGDRSAAAGSLKSPVPRSESA
ESERDHKRRKLDSHPSPSHSSSVKDNSNEPKESTSKHHINFNSVARSKSREREMEKKDAE
NTQGRSKEKKEEKDRKERKRDHIINDHESSQESKRRKDENGTNSSKNSKSTSPSCDSPLS
AEKEKSKRSKSSSKEKADSVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKS
SDKHR
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttaccctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacat
gagtttgtacagctctgcaaagacctcacagagaaacccgatcatggaagtgaaattaga
gcagacgtgcagaccgccctgtatcagctctgctgccaggttgtacagggaaacctgaag
atggaactggtcaccagcgtcctcggggagatgatggaactcagagatgacatgccatca
attttagcagatgtgttcagtatactagatatcgagacgagtgcactggaagaaaaaaac
aaacgcgaccattacactcacctggtgggggcatgtttgtgttttgtaccagaggccatc
ctgaaggagcggctggatccagaaacccttgaatcccttggactgataaaacaagcccat
cagttcaatcagaagattgtaaagattaagactaaactattttacaagcagcagaagttt
aacttgcttcgggaggagaatgaaggctatgccaaattaataactgagctgggacaagac
ctgtcgggcaacatcaccagccacctcgtcctggaaagcataaagtccctcataggttgc
ttcaacttagaccccaatcgtgttttggacatcattttggaggtatacgagagtcggtct
gatcaagatgagttctttctgtccctcatcaagtcctacatgtgtgaaccactcactctt
tgccacatactgggcttcaagttcaagttctaccaggagcccaatgaggaaacccccaag
tcactgtaccacattgctgctgccctgcttcaccacaacctaatagagctggaggatctc
tatgtacatcttatgccaccagatgcctccattgtcgaggagcacaaacgtgatatctcc
gaggccaagcagattgctcgcaagcttgtgatggtgacattgccctcagagaaaagtgaa
gataaggagaaggagaaagaaaaggaagaagagaagaatgataagccaccggataaccag
aagcttggtcttctggaagcactacttaggattggagactggcaccatgcccagagtatt
atggaccagatgccttccttttacgctacttctcacaaggccattgcactggccctctgc
cagcttgtgcacctgactgtggagcctctttatagaagagctggggttccaaaaggggca
agagggtgtgtactgcatcccctgagatacaaacgagctcctcgacctgcagagactttt
gaagatctacgcagggacacattcagcatgctgggctaccttggccctcacctctcccac
gatcctatcctctttgccaagattgtgcgtctgggcaaggccttcatgaaagagtaccaa
agtgatggcaaacctgagctcaaggacaagttggagatattgctgagctgtttcctgagc
attgcagaccaggtgctactcccctctctgtcgctaatggagtgtaacgcttgtatgtct
gaggagatgtggggtctcttcaaactctttccttaccggcacaggtaccggttatatggg
cagtggaagaatgagacgtattccggccatccactgttggttaaagtcaaagctcagact
gtggagagggccaaatacatcatgaagcgtttgaccaaagagaatgtgaaacagtctgga
aggcagattggcaagctgagccacagcaatcccaccatcctctttgattatatgctgtct
cagatccaatggtacgacaacctcattgttccggtggtggactccttgaaatacctcaca
tccctaaactatgatgtcttggcctattgcatcatcgaggctctggccaatcctgaaaaa
gagaagatgaaacatgacgacactaccatctcctcttggcttcagagcctggcaagtttg
tgtggagccgtgttcagaaaatacccaattgagttggctggcctcctccagtatgttacc
aatcaactaaaggcaggaaagagttttgacctgctgattctgaaagaggtggtgcagaag
atggctggcattgagatcacggatgagatgacctcagaacagttagaggctatgactgga
ggggagcaactcaaagctgagggtggctactttggccagatcaggaacactaaaaagtct
tcacagcgtctgaaggatgtactgctggaccatgagctggccctacccttgtgtttactc
atggctcaacagcggaacggggtggtttttttggaagggggagaaaaacatcttaaactc
gtagggcacctttatgaccagtgtcacgacacgctggtgcagttcggcggatttttagcc
tcaaacctcagcacagaggactacatcaagcgagttccctccattgacatcctttgtaac
cagtttcacactccacacgacgctgccttcttcctctctcggccaatgtacgcccatcag
attttgtcaaagtatgatgagctgaagaaggcagagaaaggcaatcggcagcagcagaag
gtgcacaagtacgtatcagcctgcgagcaggtgatgacccccgtgcacgaggctgtggtt
tccctccatccagccagagtctgggatgatcttcgcccgcagttctacgccactttctgg
tctctcaccatgtacgacttggcagtgccgcatgtggcttatgaccgggaggtcaacaag
ctcaaggtccagatcaaagccatcgaggagaacccagagatacccttaaataaaaagaag
aaggagaaggaacgctgcaccgccctgcaggaaaaactacaggaggaggagaagaagcag
ctggagcacgtccaaagagttctgcaccgcctcagactggaaaaagacaactggctgttg
gccaaatccacaaagaatgagactatcacaaagttcctgcagctctgtctgttccctcgc
tgcatcttctcttccatcgacgctgtgtactgcgcccgcttcgttgagttggtccaccag
cagaagacgcccaacttctgcaccctgctgtgctacgacagggtgttctctgctatcatt
tacaccgtggccagctgtacggagaatgagtctcatcgctacggacgcttcctctgctgc
atgctggagacggtgacgcgatggcacagcgatcgtgccgtctacgagaaggaatgcgta
aattaccccggtttcctgaccatcttcagagccacaggctttgatggaggaaacaaagta
gatcaacttgattatgagaacttcaggcatgtggtgcataaatggcactacatgctgact
aaagcttcagttcactgcctggaaacgggagattacacacacatccggaacattctgatc
gtgctcaccaagatcctgccctgctacccgaaggtcctgaaccttggccaagcgctggag
tgcagagtccacaagatctgccttgaggagaaggataagaggccagacctctatgcctta
gcaatgggttattcaggtcgcttgaaaagccagaaggtgcacatggtccctgagaatgag
tttcaccacaaggaccagccagcacgcagcgccacgcctgctagtcaacagaacggtcct
ggcagcaccagcaaacctgccaccagcacgggcaagactgaggagggggcatcagaggat
ggtgatcggggcaaggataaatctcaagggaccacaaagccagtgaacaaagccaacagt
gcagcagccaaagtgaccaccagcaacgggaatggtgctctcaacagcaccaaagctgtg
aaagagcgggacgacaaagagaagagtgggaaggagaaaaaagaaaagaaggaaaagaca
ccaggcagcactccagagacaaaggccgagaaccgtcgggagaagcagagagacgaaaga
gcggggaaggaggaacgggtggcacgtgagggtaaggagaagacccccaaggcagacagg
gagaaagtgaagccagaagagaagggcagcaaagacgacaaggccaaagccggaaacggg
gagccgatggaaccgtccagggagcgtgatgccgtaaaggaatccaagagcaaggagaaa
ggagacaggagtgctgcggccgggtccctcaagtcaccagttcccagatcagagtctgca
gaatctgagagggatcacaaaaggcgaaagctcgacagtcacccttccccgtcccactcc
tcgtctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacatcaac
tttaattcagttgcccggtccaagagcagagagagggaaatggagaagaaagacgcagag
aacacacagggcaggtccaaagagaagaaggaagagaaggatcggaaagaaaggaaaaga
gatcacatcatcaatgaccacgagtcaagccaagagtccaaacgcaggaaggatgagaac
ggcaccaattcctccaaaaacagcaagagcacaagtccttcctgtgactctcctctgtca
gcagaaaaagagaagagcaaaaggtcaaagtcatccagcaaagagaaggccgactctgtg
aagcccgagcggacttcctccggaggcaaaaaggagtccagacatgataaagagaagtct
gaaaagaaagagaagagggacagcagcggggggaaagaagagaaaaagcatcataaatcc
tctgacaagcacagataa
DBGET
integrated database retrieval system
