KEGG   Leuresthes tenuis (California grunion): 140302223
Entry
140302223         CDS       T11698                                 
Symbol
tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ltu  Leuresthes tenuis (California grunion)
Pathway
ltu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ltu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    140302223 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ltu03400]
    140302223 (tdp1)
DNA repair and recombination proteins [BR:ltu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     140302223 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 140302223
NCBI-ProteinID: XP_072237144
LinkDB
Position
Unknown
AA seq 618 aa
MSQESQHGKWTISSSDDDDEALPPSGTLTPESGRPCKSNNSSRRSVSPVPVTVPVVVKSE
PARPPVSSLVIGSEARQSAAMNQSHPVKFETSPSLAGKRKKETSGSTGWALSDSDEDDGD
VKGNSHSNLPKRMPQSPKTKKMKVESERPPSPHGRLYYIDEPEDFFESCTPSLNDTYRFY
LNKVTGLDRKYNRGALHIRDILSPLFGTLKESAQFNYCFDIAWMVKQYPSEFRDLPVLIV
HGDKREAKARLVQQAQPFLHVRFCQAKLDIAFGTHHTKMMLLLYEEGFRVIILTSNLIRA
DWYQKTQGMWMSPLFPRLPKGSNASAGESPTFFKRDLLEYLASYRAPELEEWIQRIKEHD
LSETRVYLVGSTPGRYVGPDMERWGHLRLRKLLYEHTNPIPGEEKWPVIGQFSSIGSMGL
DKTKWLAAEFQRTLTTLGKSSLRPDPPMHLVYPSVEDVRTSLEGYPAGGSLPYSIQTAQK
QLWLHSYFHRWKANTTGRSHAMPHIKTYMRASPDFTQLAWFLVTSANLSKAAWGALEKNN
TQVMVRSYELGVLYVPSAFNMKTFQVDENPFPVSSSTSGFMVPFDLPPTNYSPKDQPWIW
NIPYSQAPDTHGNVWVPS
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgtctcaggagagtcaacacggcaagtggaccatctccagcagtgatgacgatgatgag
gctcttcctccttctgggaccctgacacccgaatccggtcggccttgtaaatccaacaac
agttcccgtaggtctgtctctccggtaccggtgactgtccctgtggtggtgaaatcagaa
ccagccagaccccctgtgtcttcgctcgtcattggctctgaggccagacagtcagctgca
atgaaccagtcacacccagtcaagtttgaaactagcccctcattagctggaaagcggaag
aaagagacatcaggtagcacaggctgggcactctcagacagcgatgaggatgatggagat
gtaaaggggaacagtcacagtaacttgccaaaacggatgcctcagagccccaagacaaaa
aaaatgaaggtggagagtgagcgtcctccaagtccccacggccgactttactatattgat
gagccagaggacttctttgagtcctgtactcctagtcttaatgacacctacaggttctac
ctcaacaaagtcacaggcctggacaggaagtacaatcgtggagccctgcacatcagagac
attctctcaccgttatttgggaccttgaaagagtctgctcagtttaactactgctttgat
attgcttggatggtgaagcagtacccatcagagtttagggatcttccggttctgattgtc
catggagataagagggaggccaaggcacggctggtgcaacaggctcagccctttctacat
gttcgcttctgtcaggcaaagctggacattgcttttggaacgcatcacacgaaaatgatg
ttactgttgtacgaggaaggcttcagagtcatcattctcacctccaaccttatcagagca
gactggtaccagaagacacaagggatgtggatgagccccctgtttccacggttaccaaag
ggaagcaatgcgagtgcaggtgagtcacccaccttctttaagagggacctgctggagtac
ttggcgtcgtaccgtgcgccagaactcgaagagtggatccaacgaatcaaagagcacgac
ctgtcagagacgagggtgtatttggtcggctcaaccccgggaaggtatgtgggtccggac
atggagcgctggggccacctgaggctgaggaagctgctttacgagcacacaaatccgatt
cctggtgaggaaaagtggcctgtgattggccagttctccagcatcggctccatgggactg
gataagaccaaatggttggcggcggaatttcagcgcactcttaccacactagggaagtcc
tcccttcgcccagaccctcccatgcacctggtatatccatcagtagaagatgtgaggacg
agtttagaaggctacccagccggcggctctcttccttacagcatccagacggctcagaaa
cagctctggctccactcctacttccaccgctggaaggcaaacacgacagggaggagccac
gccatgccgcacatcaagacatacatgagggcttctccagatttcacacagctcgcctgg
ttccttgtcaccagtgcaaacctgtccaaggcagcatggggtgcgctggagaagaacaac
actcaggtgatggtgcgctcatatgagctgggagtcctctacgtgccgtcagcctttaac
atgaagacattccaagttgatgaaaatccatttcctgtctcctcatctacctctggtttc
atggtaccctttgacctcccccctacaaactactctccaaaagaccagccgtggatctgg
aatattccatacagccaggcgcccgacacacacggcaatgtttgggttccctcctga

DBGET integrated database retrieval system