Leuresthes tenuis (California grunion): 140302848
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Entry
140302848 CDS
T11698
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ltu Leuresthes tenuis (California grunion)
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ltu03041
]
140302848 (ddx27)
03009 Ribosome biogenesis [BR:
ltu03009
]
140302848 (ddx27)
Enzymes [BR:
ltu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140302848 (ddx27)
Spliceosome [BR:
ltu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
140302848 (ddx27)
Ribosome biogenesis [BR:
ltu03009
]
Eukaryotic type
Pre-60S particles
Helicases
140302848 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
SNF2-rel_dom
PRK
Motif
Other DBs
NCBI-GeneID:
140302848
NCBI-ProteinID:
XP_072237460
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MLEQLGLVGTIRDEDQSPEEPDSESEQEEERIVLNRKKKFGSGGSRDFNCDFEFGERDGP
ELDENWAMADVMKQLKKKRVVTTLDQKIEKIRKKRKAEVSPSVQFWSHCFRGPLHGSDTY
FDLQEKLGQNEAAEGPSGKTEEEDDDKDIKEEPSDGEEEDEEEEEFGSSDEEVLTKSDTL
REKDRRGRKRKTEEEVPQEFYGDASQFDSQLTFDDMNLSRPILKAISALGFKQPTPIQKA
CVPVGLLGRDLCACAATGTGKTAAFMLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHS
VARQLAQFTSITTCLAVGGLDLKSQEAALRAGPDVLIATPGRLIDHLHNTPSFELTQIEI
LILDEADRMLDEYFEEQMKEIIRMCSFNRQTMLFSATMSEEVKDLAAVSLKQPIRIFVNS
NTDVAPFLRQEFVRIRPHREGDREAVVAALLTRTFQDHVMCFTQTRKQAHRLHILLGLIG
LKVGELHGELSQNQRLENLRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPSTVKHY
VHRVGRTARAGRSGRSVSLVGESERKTLKEVVKSAKNSVKARVLPPEVILKFRDLISKLE
KDVEAVMRLEREERELAASEAKLSVAQRRLDDSAPSCESQRVWFQTQQERKQSRVSKALQ
EFDLALRGKKKREKFLKEGKKRKELTSEDRAQFEILKAQMFAERAAKRERRPKRARAMAE
DDTPTTAANQNPGRGGRKSMFDKELTNTSRKALKHYRAGPSFADRKRLGLDRKRSNSSRF
KKK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgttggagcagctgggcctggtcgggaccatccgggacgaggaccagagtccagaagaa
ccggactccgagtccgaacaggaggaggagcggatcgtcctgaacaggaagaagaagttt
ggaagtggcgggtcgagagacttcaactgtgactttgaatttggagagagagatgggcct
gagctggatgaaaactgggccatggccgacgtaatgaaacagctcaaaaagaagagagtc
gtgacaactctggaccagaaaatagagaaaatcaggaagaaaaggaaagctgaggtgagt
ccatcagtccaattctggtcccattgctttcgaggtccacttcatggttctgacacttac
tttgatctgcaggaaaaattgggtcagaatgaggcagctgaaggtccatcagggaagact
gaggaagaagatgatgataaagacatcaaagaagagccttctgatggagaggaggaggat
gaggaggaggaggagtttggctcgagtgacgaggaggttctgaccaaatcagataccctc
agagagaaagatcggcgagggaggaagaggaagactgaggaggaggtgccacaggagttt
tacggcgatgcatctcagttcgacagtcagctgacctttgatgacatgaacctgtccaga
cccatcctgaaggccatctcagctttgggattcaaacagccaaccccgatccagaaggcc
tgtgttccggtcggtctcctgggcagagacctgtgcgcctgcgctgctactgggacaggg
aagacggcggccttcatgttacctgtgctggaacgtttggtttataagcccaggacgtcc
caagtgacccgagttttggttctggttcctaccagggagctgggaatccaagttcactct
gtggcccgtcagctggcccagttcacctccatcaccacctgcctggctgttggtggtttg
gacctgaagtcccaagaggctgcattgagggcagggccagatgttctgatagctacacct
ggccgactgatcgatcaccttcacaacacaccgagctttgagctgacacaaatcgagatc
ctgatcctggacgaggccgacaggatgctggacgagtactttgaagaacagatgaaggag
atcatcaggatgtgttccttcaacagacagaccatgttgttctctgccaccatgtcagag
gaggtaaaggacctggcagcggtgtccttaaagcagccaatcaggatctttgtcaacagc
aacaccgatgtggctcctttcctgcgacaggaatttgtccggatcagaccccacagagaa
ggggaccgtgaggcggtggtggctgctctactgactcggacgttccaggatcatgtgatg
tgtttcacgcagacgaggaagcaggcgcacagactgcacattctgctgggtctgataggc
ctgaaggtgggggagctgcacggagaactgagccagaaccagcgactggagaaccttagg
cgtttcaaagacgagcagatcgacatcttggttgcgacagatgtagcggcaagaggtttg
gacattgatggagtgaaaacggttataaacttcaccatgccgtcgacggtcaaacattac
gttcatcgcgtgggccgaacagccagggccggccgttcaggacgttcagtgtctttggtt
ggagagtctgagaggaagaccctgaaggaggtggtgaagtctgccaagaacagcgtgaag
gcccgtgtcctgccgccagaggtcatcctgaagtttagagatctgatctccaaactggag
aaagatgttgaggctgtgatgaggctggagagagaagaaagagagctggctgcgtctgag
gccaagttgagtgtggctcagaggcgtcttgatgactccgccccctcctgtgaatcacag
cgagtttggtttcagacacaacaggaacgcaaacagagccgcgtgtcgaaggccctgcag
gagtttgatctcgctctaagagggaagaagaagagagaaaagttcctgaaggagggaaag
aagaggaaagagcttacgtctgaggatcgcgcacagtttgagatcttaaaggcgcagatg
tttgctgaacgggccgccaagagggagaggcgaccaaagagggcaagagcgatggcggag
gatgacacaccgaccacagcagccaatcagaatcctggaagaggcggcaggaagtccatg
tttgataaagagctcacaaacacaagcaggaaggctctgaaacactacagagcaggacca
tcctttgctgacaggaaacgtttgggactggacagaaagcgctccaacagctccaggttc
aagaagaagtga
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