KEGG   Leuresthes tenuis (California grunion): 140303271
Entry
140303271         CDS       T11698                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
ltu  Leuresthes tenuis (California grunion)
Pathway
ltu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ltu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    140303271 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ltu03019]
    140303271 (wdr82)
   03036 Chromosome and associated proteins [BR:ltu03036]
    140303271 (wdr82)
Messenger RNA biogenesis [BR:ltu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     140303271 (wdr82)
Chromosome and associated proteins [BR:ltu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     140303271 (wdr82)
    COMPASS/SET1 complex (yeast)
     140303271 (wdr82)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_EML WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st PAC11 Beta-prop_NUP159_NUP214 Tricorn_2nd WD_LRWD1 Beta-prop_ACSF4 MinC_C Beta-prop_HPS5 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 140303271
NCBI-ProteinID: XP_072238062
LinkDB
Position
Unknown
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctaacggacaatgtgctacggagcttcagggttgctaaggtctttcgggagaac
tcagacaaaattaattgcttcgatttcagttcaaacggagaaactatcatttccagcagt
gatgacgactcattagtcttatatgactgccaagagggaaaacccaagaggacactctac
agtaaaaagtatggagtggatctgatcaggtacacgcatgctgcaaacacagtggtctac
agttccaacaaaatcgatgataccatcagatacttgtcccttcatgacaacaaatacatt
cggtactttcctggacacaacaaaagagtgacatctctgtccatgtctcctgtggatgac
acatttatttctggctcattagataaaaccatcagactgtgggatctgcggtcacccaac
tgtcagggcttgatgcacctgcaggggaagccagtgtgctcttttgatccagagggtctg
atttttgcagctggaataaattcggagatggttaaactctatgatctgcggtcatttgat
aagggtccctttgcaaccttcaagcttcagtatgaccggacgtgtgagtggacaggactc
aagtttagtaacgatggaaaactcattcttctttctactaatggaggagcccttcgcatc
ctggatgcatttaagggtgctgtgctccattcctttgggggctacaacaacagtaagggg
gtgacactagaggcttctttcactcctgattctcagtttgtaatgatcggctctgaggat
ggaaagattcatgtatggaacgcagagagtggcatgaaggtggcattattagacgggaag
cacacgggccccattacctgtctgcagttcaaccccaaattcatgacgtttgccagcgcc
tgctccaacatggcattctggctccccaccatcgatgactga

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