Leuresthes tenuis (California grunion): 140304752
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Entry
140304752 CDS
T11698
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140304752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ltu03041
]
140304752
03009 Ribosome biogenesis [BR:
ltu03009
]
140304752
Enzymes [BR:
ltu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140304752
Spliceosome [BR:
ltu03041
]
Complex A
U1 snRNP components
U1 related factors
140304752
Complex B
140304752
Ribosome biogenesis [BR:
ltu03009
]
Eukaryotic type
Pre-60S particles
Helicases
140304752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
140304752
NCBI-ProteinID:
XP_072239617
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKKHWNLDELPKFQK
NFYQEHPDATHRPIQEVEQYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVISKQNWTE
PTPIQAQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLMQMAE
DRGGRGRGGRGGYKDDRRDRYSGGGRSNFGGSGYRDRDNDRGFGNGPKTAFGGSKAQNGN
NYGGNSGNSGSSYGSNNYNNSNGQGNFGGPPNQGGFGNQSFQGPAQFGGMQRASQNGMNH
PPFPFNSQPPPPQNQQPPPPPPMVPYPMPPPFPQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattttcagacagagatcgtggcagagatagagggtacggtggcggtccccct
cgttttggcggtggtggaggaggcaacaggggtggacctcctccaggaaagtttggcaac
cctggtgagaggctccgaaagaagcactggaaccttgatgagcttccgaaatttcagaag
aacttctaccaggagcatccagatgctacacacagaccaattcaagaagttgaacagtac
cgcagaagcaaagaagttacagtcaaaggcagagattgccctaaaccaattgtaaaattc
catgaagctgcatttcccagctacgtcatggatgtcattagcaaacagaactggactgaa
ccaactccaatccaggctcaggggtggcctgttgccctgagtggcaaagacatggttggc
atcgctcaaactgggtctgggaaaactcttgcataccttctgcctgcaattgtgcacatc
caacatcagccatttctggaacatggagatgggcctatttgcttggttctggcaccaacc
cgtgagctggctcagcaagtacagcaagtagctgcagagtacggcagggcatctcgcctc
aagagcacctgcatctatggcggcgctcccaaaggacctcaaatcagggaccttgagagg
ggtgttgagatttgcatcgctaccccgggccgtctcattgacttcctggagtgtggtaaa
actaatttgcgtcgttgcacctatctggtactggatgaagctgaccgcatgctggacatg
ggctttgaacctcagatccgcaagatagtggaacaaattcggcctgaccgtcagacccta
atgtggagtgccacctggccaaaggaagttcgtcagctggctgaagatttcctgaaggac
tacgtccagatcaatattggagcactgcagctcagtgccaatcataacatcttgcagatc
gtagatgtttgcaatgacatggagaaggaggacaagctgatacgtttgctggaggagatc
atgagtgaaaaagagaacaagaccattatttttgtggagaccaaaagacgttgtgacgag
ctcaccagaaggatgagaagagatgggtggccagcaatgggaatccatggggataagagc
cagcaggagagggactgggtccttaatgagttcagatatggcaaagctccaattctcatt
gctacagatgtggcctcccgtggattagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctctgaggattatatccaccgcattggacgcacagcccgaagtcaa
aaaacgggcacggcttacaccttcttcacccccaacaacatgaaacaagccagtgacctg
atctctgtgctccgtgaggctaaccaggccattaaccccaagctgatgcagatggcagag
gacagaggaggtcgtggaagagggggaagaggtggctacaaggatgaccgtcgggatagg
tattctgggggagggaggagtaactttggtggtagtggttacagggacagggacaatgat
agggggtttggcaacgggccaaagactgcctttggaggcagtaaggcccaaaatggcaac
aattatggaggcaacagtggtaactctggtagtagctatggtagcaacaattacaacaac
agcaacggacagggtaattttggtggtccaccaaatcagggaggctttggtaaccaaagc
ttccaaggcccagctcagtttggtggcatgcagagggcttctcagaatggcatgaatcac
ccaccattccccttcaactctcagccgccaccaccacagaaccaacagccaccaccccca
ccaccgatggtgccctaccccatgccaccaccgttcccacagtag
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integrated database retrieval system
