Leuresthes tenuis (California grunion): 140306565
Help
Entry
140306565 CDS
T11698
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04110
Cell cycle
ltu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
140306565 (smc1b)
04114 Oocyte meiosis
140306565 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ltu03036
]
140306565 (smc1b)
Chromosome and associated proteins [BR:
ltu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
140306565 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
140306565 (smc1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
Cys_Met_Meta_N
Motif
Other DBs
NCBI-GeneID:
140306565
NCBI-ProteinID:
XP_072241272
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MGYLKQIDIENFKSWRGKQVIGPFMRFNCIIGTNGSGKSNVMDAMSFAMGERAASLRVKH
LRDLIHGAHIGQPVSNTARVAMRYSSDEDQEKVFCRTITGDSSEYRINGVHVTFATYIEE
LQKIGIVTKAQNCLVFQGAVESIALKDPKERTKMLECISQSKEYAAEYHKKKEALLKAKE
DTQFHFNKKKSATVERKQVSQEKMEAQRYQALIDDLHQHRLQLSLAELYHNERGIGAIGD
TLSRRQHVAAATNNKLVNWEQTVKAQKKEHGRLSREQQHIEKEIRGQEHILSQSQSQYIK
AKVNTTHYTKKAEEIHHAVRKSRKLLANKEQELAEGRQEKAELERTWKNYEKQVQAEGTA
GGRDIELDKVQLEQYKELKELARKQGAVLSQQAEKLHWEVRADCEKMASDQSRKKEMEIC
IRNCQSHLEDLTSRAEKLEEYTKTCKSCLEDYRKREESLSAELQRVSQRSKEVNQELGQV
MEELGNARLDSHESKRQLRRRELLEKLRRLYPEAVYGRLSDLCSPIHKKYQLAVTKLFGS
NMNAIVVTSEKVARDCISFMKEERAEPETFLPIDYLVVHPLNERLREIPGAKMVVDVVQV
NAPTGAAQLRKVVQFVCGNALVCETIKEGRSVAFDREERLRTVTLDGTLFKTSGVISGGS
NYLRTKARCWDEKDMLQLKERKDRLTAELRDLMKLKRKESDLKQTVAEAQGAQTRLKYSK
TDLENLQKKTIPRCQAEISRMESELANLDYQIQMQQESLEAKNEEMKKIRHQIDQMEDLV
FSDFCAEIGVDTIREYEQEHLKQQTELDKKRLEFESQCTRLSAQLEYVENQLEKERKKLR
KMEDAIRKEEGTIVERKEDENKLLEAVQKGENKLLELKNQLLSKKSQVAAVKTELDQKTK
ILQDIDKELMKLQREVMSAETALEQKRQARHNLLLACKIQDLPIILMSGSLNEISEVQLD
TDSESTSATMNIYEREAQLVIDYSELESEFKNLQNEEIEAHLEKLRESVSSLEGVLHRTT
APNLKALEKMRDVKDKLQGVMEAFDASTKAARKCSQEFEKAKAQRFHLFSRCFEHVSVVI
DQLYKRICRNSSAQAILSAENADEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIAALALL
FAIHSFRPAPFFILDEVDAALDNTNIGKVTSFIREESRQNMQIIVISLKEEFFSKADALL
GVFSDFDGCMFSRILTLDLRPYPLVEDDNEKQTDKAL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggttatcttaaacaaattgacattgaaaacttcaagtcatggcgagggaagcaagtt
attggtccattcatgcggtttaactgtataattggcacaaatggctctggtaagtccaat
gtgatggacgccatgagctttgccatgggagagcgggccgcctccctccgagtaaagcac
ctgagagacctgatacacggagcccacatcggtcaaccggtgtccaacaccgcccgcgtg
gccatgcgctacagcagcgacgaggaccaagagaaggtcttctgccggacaatcactggc
gattcctctgaatatcgcataaatggtgttcatgttacgtttgctacatacatcgaggag
cttcagaagattggcattgtgaccaaagctcagaactgtttggtgttccagggggcagtg
gaatccattgctttgaaggacccaaaggagcgaaccaagatgctggagtgcattagtcag
tccaaggagtatgctgcggaataccacaagaagaaagaggccctgctcaaagcgaaagag
gacacacagtttcacttcaacaagaaaaaatcagccactgtggagaggaaacaggtgtcc
caggaaaagatggaggcccagagataccaggcattgattgacgaccttcatcaacaccgt
ctgcagctaagtcttgccgagctttaccataacgagagaggcatcggtgctattggtgac
acgctgagtaggaggcaacatgttgctgcagctacaaacaataaactggttaactgggag
cagacggtcaaagcccaaaagaaagaacatggccgcctcagtagagaacagcagcacatc
gagaaggagatccgtggtcaggaacacatcctttcccagtctcagtctcagtacatcaaa
gccaaagtgaacaccactcattacacgaagaaggctgaggagatccatcatgctgtaaga
aagagtcggaagctgttggctaataaagagcaggagctggcagaaggtcggcaggaaaag
gctgaacttgagaggacctggaaaaattatgagaagcaggttcaggcagaggggactgca
ggggggagagacatcgagttggacaaggttcagttagagcaatacaaggagctgaaggag
ttggcccggaagcagggggcagttctcagccagcaggcagagaagctacactgggaggtg
agggcagactgtgaaaagatggcttctgaccagagcagaaagaaggaaatggagatttgc
atcagaaactgtcaaagtcacctggaagatttgacaagcagagcagagaaactggaggag
tacactaagacctgcaaatcatgccttgaggactaccgtaagcgggaggagagcctcagt
gcagagcttcagcgcgtctctcagcgcagcaaggaggtgaaccaggagctgggccaggtt
atggaggagctggggaacgctcgtctggacagccacgagagcaaacgccagctgcggcgc
agagagctgctcgagaagctccgcagactctatccggaggctgtgtatggccgactgtct
gacctgtgcagccctatccataagaagtaccagctggctgttaccaagttgtttggcagc
aacatgaatgccattgtggtgacatctgagaaagtagcccgtgactgcatcagctttatg
aaggaggagcgagccgaaccagagacattcctgcccattgattacttggttgttcatcct
ctgaatgagcgactgagagagattcctggtgccaaaatggtggtcgatgttgtacaggtt
aatgcgcccacaggtgccgcacagctgagaaaagtggtgcagtttgtctgtggcaatgcc
ttagtgtgtgaaaccatcaaagaaggcagaagtgtggcctttgacagagaggaacgcttg
aggacagtaacccttgatgggacactgtttaaaacatcaggtgtgatctccggaggttcc
aattatttgcggaccaaagctcgctgctgggatgagaaggacatgttgcagctgaaggaa
cgcaaggatcggctgacggctgagttgcgcgatttgatgaagctcaagaggaaggagtca
gacctaaaacagacagttgctgaggctcagggtgctcagacccgcctcaaatattccaaa
accgatctggaaaaccttcagaagaaaaccatccccagatgccaagcggagatctctcgt
atggagagcgaattagcaaacctggactatcagattcagatgcagcaggagagcctggag
gcaaagaatgaagagatgaagaagattagacaccagattgaccagatggaagacttggtg
ttttctgacttctgcgctgagatcggtgtggacaccatcagagaatatgagcaggaacat
ttgaaacaacagacagagctcgacaagaaacggctggagtttgaaagtcagtgtactcgc
ctgagtgcacagcttgaatatgtagaaaaccagctggaaaaggagaggaagaagcttcgc
aaaatggaggatgctattagaaaggaggagggaaccatagttgagaggaaggaggacgag
aataagctgttggaggcagtgcagaagggtgagaataagctgctggagctgaagaaccag
ctgttgtctaaaaaaagtcaggtggctgctgtcaaaactgagctggaccagaaaactaaa
attcttcaagacattgacaaagagctgatgaagcttcagcgggaggtgatgtctgcagaa
actgccttggagcagaaacgccaggcgagacacaacttgcttctggcctgtaaaatccag
gacctgcccatcattctgatgtcagggagcttgaacgaaatcagtgaggtgcagctggac
accgattcagaaagcacttcagccaccatgaacatctatgagagagaagctcagctggtc
atcgactattctgagctggaatcagagttcaagaatctgcagaatgaggagatagaggcc
cacctggagaagctgagggagtcagtctcctctttagaaggagtgctccatcgcaccacc
gcacccaacctaaaggctctggagaaaatgagggacgtgaaggacaagttacagggtgtg
atggaagcctttgatgccagcacgaaagcagccaggaagtgcagtcaggagtttgaaaaa
gccaaagcccagcgcttccacctcttcagccggtgtttcgagcacgtgtctgttgtaatc
gatcaactctataaaagaatatgcaggaacagcagcgctcaggccattctgagtgctgag
aatgcagacgaaccgtacttgggtggcatcaactacaactgcgtggcaccaggaaagcgc
ttcatgtccatggacaatctgtcgggtggagaaaaagccatcgctgctctggccttacta
ttcgccatacacagcttccgacccgctcctttcttcatcttggatgaggtggatgcagct
ctggacaataccaacattggcaaggttaccagcttcatcagagaagagtccaggcagaac
atgcagatcattgtcatctccctgaaggaggagtttttctccaaggccgacgctctgctg
ggagtcttttcagattttgatggatgcatgttcagccgcattctgaccttagacctgcgt
ccgtaccctctggttgaagacgacaacgagaaacagaccgacaaggctttgtag
DBGET
integrated database retrieval system
