Leuresthes tenuis (California grunion): 140307086
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Entry
140307086 CDS
T11698
Symbol
blm
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03440
Homologous recombination
ltu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140307086 (blm)
03460 Fanconi anemia pathway
140307086 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ltu03032
]
140307086 (blm)
03400 DNA repair and recombination proteins [BR:
ltu03400
]
140307086 (blm)
Enzymes [BR:
ltu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
140307086 (blm)
DNA replication proteins [BR:
ltu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
140307086 (blm)
DNA repair and recombination proteins [BR:
ltu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
140307086 (blm)
Bloom's syndrome complex (BTR)
140307086 (blm)
FA (Fanconi anemia) pathway
140307086 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
DUF1178
Motif
Other DBs
NCBI-GeneID:
140307086
NCBI-ProteinID:
XP_072241922
LinkDB
All DBs
Position
Unknown
AA seq
1408 aa
AA seq
DB search
MTNLPQNNLEEHLAKHSNAAQSKLSLAKPKTGAFLFKKKSSSGTTKVEYPTKVIGSNVLA
NRNVNVRQSSLVTKSPMTFSNKLERLQKSKINNFFSVSSKCQSDSNSSAASLSPACQTPS
SLSGTKVTPAPIRSDGQFRRGSGMNSKSLDASGFPIDDWDDFDDFETPAKTKNDSFCSDI
SGKVTKPLSTPNEEFTEFTGSSDACDVKSELSNKNGDKTDELEYIVDKAAVSSGPSLTQE
PAEYEVDDSPVKMTRKSLPAHVKSVLSDSEEDIGAISEPFDDQKDNSKKWIDSKVIEVND
NSEPEDELDYIPPSPVPDEMSYTISALETRTNTAGGQSRNNPVKSKGSTKTEPEPADLNS
RNKTNEQLFSVMESICTLVDSIPEHELIGLSCGNELLLKRALRKRILATGGDYSFRMQQP
DSTVISENSFKETTSSSCGTSCGLSSNSSLPVDLKKPPQPRRSSVISLDYDSDDTDLKPF
ERKNSRTICVESESVCESPSAHSFKKPPFNLSDKTSTDLNDSDLFFSAKQPEAVMQNKSK
TPTYATAEDAEADDFYIDDFDIDDFNDSDIPDYFEPPASSVSRQNFSTVTTTVKEGGPSK
SSWEKKPTTPVSAPKTSKICSPEPTFKNPAHDRFRGFNFPHTQEMMKIFHKRFGLHQFRF
NQLEAINATLLGEDAFVLMPTGGGKSLCYQLPACISPGVTVVISPLKSLIVDQIQKLTTL
DIPATSLSGEKSDSEAGRIYMQLSRKDPIIKLLYVTPEKVSASNRLISALQNLYERGLLA
RFVIDEAHCVSQWGHDFRPDYKRLHELRQKFPSVTMMALTATATPRVQKDILNQLNMTRP
QVFTMSFNRANLKYSVLPKKPKKVDEDCIGWIKKHYPRDSGIVYCLSRNDCDAMAESLQR
AGILALSYHAGLRDGDREYVQTKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSV
EGYYQESGRAGRDGEISHCILFYSYSDVHRIKRIISMDREGDRHAKATHYNNLHSMVHFC
ENVMECRRIQLLAYFGELKFNRSFCKDHPDVSCDNCYKPNQYKMRNVTEDVKNIVRFVQE
NCEKVGARFGKTAHQSRLTLNMLVDIFIGSKSAKVQTGMFGMGGAYSRHNADRLFKKLVL
DNILVEDLYITNNGQAVSYTSAGSKAMNVLSGHMQVEFYETESASSIRKHKAVAKNVSQR
EEKVQECLKALTDLCKQLGKAFGIHYYNIFSTSTLKKISEKLSSDPEVLLQIDGVTEDKL
EKYGAEVIQVLEKYSEWQLPEEQSVGAGDGWIDTTRGRTHQEEDDLESSTYFQNQAAQGQ
KRKKAPFFKYSKKRKGYGNASSSSKGRGYNSNKSWSSSSSRGGSQSAGRGSRSSAGGAPA
GRRPGFLAAPMPQSSKRPFLKPTFSHMN
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcttccacaaaacaacttagaggaacatttggcgaagcacagcaatgctgcc
caaagcaagctgtcactggcaaagcccaaaacgggggccttcttgttcaagaagaagtcc
tcatcaggtacaaccaaagtggaatacccaaccaaggtaatcggctcaaatgttttggca
aataggaatgtcaatgtccgtcagagcagtttggtgactaaatctcctatgacattttca
aacaagcttgaaagacttcaaaaatccaaaatcaacaacttcttctctgtaagttcaaaa
tgccagtcagactcaaacagctcagcagctagtctgtctccagcatgtcagactccctca
tcgctgtctggtactaaagtaactccggctccgattagatctgatggccaatttcgccgt
ggcagtggaatgaattccaaaagtctggacgcatcaggatttccaatagatgactgggat
gattttgatgactttgaaacaccggccaaaacaaaaaacgactcattctgctcagacatt
tcaggaaaagtcaccaagccattgtcaactcctaatgaagaattcacagaatttacaggt
agcagcgatgcttgtgatgtgaaatcagagttaagcaacaagaatggtgacaagactgat
gagctggagtacattgtcgacaaagctgcagtctcttcggggcctagtttgactcaggaa
ccggcagagtatgaagtggatgattctccagtcaaaatgaccagaaaaagtcttcctgca
catgtaaagtcagtcctgagtgatagcgaggaggacattggtgccatatctgaacctttt
gatgaccagaaagacaatagcaaaaaatggattgactcaaaggtgatagaagttaatgac
aactcagaacctgaagatgagcttgactacattcctccctcacctgtccctgatgagatg
tcttatacaatctctgcgttggagacaagaaccaacacagctggtggtcaaagtagaaac
aatcctgttaagtctaagggctctacaaaaactgagcctgaacctgctgatctcaactca
agaaacaaaacaaatgaacaacttttcagtgtcatggagtctatttgtactctggttgat
tccatccctgaacacgaactaataggtttatcctgtgggaatgagcttttactaaagagg
gctctgaggaagaggattcttgctactggtggagactattcattcaggatgcagcagcca
gacagcacagtaatttctgagaacagctttaaagaaactacttcttctagctgtggtaca
tcttgtggcctgtcatccaacagctctttgcctgtggacttgaagaagcctccacagccc
agaagatcctctgttatctctttggattatgactctgatgatactgatttaaagcctttt
gaaaggaaaaactctaggacgatatgtgtggaaagtgagagtgtttgtgagtctccatca
gcccacagcttcaaaaagccaccgttcaatctctctgataaaactagcactgacctcaac
gattcagatctcttcttctcagccaagcagccggaggccgtgatgcaaaataaatctaaa
accccaacttatgctacggcagaagatgctgaagcagatgacttttacatcgacgacttt
gacatagatgactttaatgattcagatatccctgattactttgagccgccagcttcatca
gtttcgagacaaaacttcagcactgtgactacaacagtgaaagaagggggaccaagcaaa
tcctcatgggagaagaaaccaacgacacctgtttctgcgcctaaaacttcaaagatttgt
tccccagagcccaccttcaaaaacccagctcacgatcgcttcagagggttcaacttcccc
cacacacaggagatgatgaagatctttcataagcgttttggtctccatcagttcaggttt
aatcagctggaagcaattaacgctacacttctgggagaagacgcatttgttctgatgccc
acaggtggcggtaaaagtttgtgctatcagctgcctgcctgcatctctcctggagtaacc
gttgtcatttccccactcaaatcacttattgtggaccagatccagaagctcaccacccta
gatattccagcaacaagcctgtctggtgagaaaagtgacagtgaagcaggaaggatttat
atgcagctttccaggaaagaccccataattaaattgctgtatgtcacacctgagaaggtg
agtgcaagcaacaggttaatttccgccctgcagaacctgtatgagcgaggcctcctggcc
cgcttcgtcatagacgaggcacattgtgtcagtcagtggggccacgatttccgtccagac
tacaagaggttgcatgagctgcgtcagaagtttcccagcgtgacaatgatggctctgaca
gccaccgccaccccccgtgtgcagaaagacatcctgaaccagctgaacatgacgaggcca
caagtatttaccatgagcttcaacagagctaatctcaagtactctgtgctgcccaagaaa
cccaaaaaggtagacgaggactgcatcggctggatcaagaagcactacccacgtgactct
ggcatcgtgtactgcctgtctcgtaatgactgtgacgccatggcagagagtcttcagaga
gcagggatactggctctgtcgtatcacgcaggactgcgtgatggcgacagggaatacgtg
cagaccaaatggatcaatcaggacggttgccaggtcatctgtgccacgatagcctttggc
atgggtattgacaagccagatgtgcgctatgtgatccacgctagtttacctaaatcagtg
gagggatactatcaggagtcgggcagagctggcagggacggagagatctctcactgcatt
ctcttctactcctactctgatgtccaccgcatcaagaggattatcagtatggacagagaa
ggtgacagacatgccaaggcaactcattacaacaacctacacagcatggtgcacttctgt
gagaacgtgatggagtgcagacggattcagctgctcgcatactttggggagctgaagttc
aacagaagcttctgtaaagaccatccagacgtcagctgtgacaactgctacaaacccaac
caatacaagatgaggaacgtgactgaagatgtgaagaatatcgtcaggtttgtccaggag
aactgtgagaaagttggagcgaggtttggcaagacagctcatcagagcagactgactcta
aacatgcttgtggacatcttcataggctccaaatccgccaaggtacagacaggaatgttt
gggatgggaggagcttactctaggcataatgccgaccgtctcttcaaaaaactggttctg
gataacatcctggtggaagacctctacatcaccaacaacggccaggctgtttcttacaca
tctgctggatcaaaagccatgaacgtgctgtctgggcacatgcaggtggagttttatgag
accgagagtgcgtcaagcatcaggaagcataaagccgtcgccaagaacgtctcccagaga
gaggagaaggttcaggagtgtctgaaggcgctgacagatctgtgtaaacagctgggcaaa
gcatttggcattcactattacaacattttctccacttccaccttgaagaagatatctgaa
aagctttcctctgaccctgaagtccttctacaaattgacggtgtgacagaggacaagcta
gagaagtatggagctgaagtcattcaggtgctagagaaatattccgagtggcagctacct
gaggagcagtctgtgggggctggagacgggtggattgacaccaccagaggccgcacacat
caagaagaagatgacttggagtcctccacctacttccagaatcaggctgctcagggacag
aagagaaagaaagctccattcttcaagtattccaagaagagaaaaggatatggcaacgcg
agctccagttctaaaggtcgcggctacaatagcaataagtcgtggtcatcatccagctcc
agaggtggttcgcaaagtgcaggtcgagggtccaggagctcagcgggaggggctccagca
ggcagacgaccaggattcttggctgctccaatgcctcaaagcagcaagcggcccttctta
aagcccacgttttcacacatgaactga
DBGET
integrated database retrieval system
