Leuresthes tenuis (California grunion): 140307204
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Entry
140307204 CDS
T11698
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03022
Basal transcription factors
ltu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140307204 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
140307204 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ltu03021
]
140307204 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
ltu03400
]
140307204 (gtf2h1)
Transcription machinery [BR:
ltu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
140307204 (gtf2h1)
DNA repair and recombination proteins [BR:
ltu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
140307204 (gtf2h1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
140307204
NCBI-ProteinID:
XP_072242086
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVIKKVRQRKQDGTMYLMAERIAWGPEGKDRFTVSHLYSDIRCQKISPDGK
AKIQLQLVLHTGESTTFHFANESTALKDREAVKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLGGINNAEPAPYDNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSLVTQGVKNPLVDLLSLEDKTLDEGYGISTTLPSTSNANRTVKES
SNSAIIKRFNHHSAMVLAAGARKGEPPTDQASETSSTDGNSRDSDFFQPPVKKVKLQEAI
EYEDLLRENRPKTVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVNYIQHEMANYTPNL
TQVLSSTAASSAIAALSPGGILMQASAQQAISQMAPIEIQGELKHLYMAAGELLRHFWSC
FPVNTPFLEEKVTKMKSNLERFQMTKLRPFQEKIQRQYLSVNFTGHLEDMLQTAYSKFHV
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgtcggaggaggtgctgctggtgattaaaaaggtccgtcagaggaagcag
gatggcacaatgtatctgatggcggaacgaatagcctggggtccagaaggcaaagaccgc
ttcacagtcagccacttgtattcagatattcgctgtcagaagatcagccctgacggtaaa
gccaaaattcagcttcagctggtccttcacaccggtgagagtaccacattccactttgcc
aatgagagcaccgcactcaaagaccgagaggctgtcaaggaactactgcagcagctgctg
cccaagttcaagaagaaagccaacaaggagctggaagagaaaaaccggatgcttcaagaa
gatcctgtgcttttccagttgtacaaagacctcgtggtgagccaagtgatcagtgctgag
gagttctgggccaaccggttaggaggcataaataatgcagaacctgcaccgtatgacaac
aaacaggaagtcgggatatctggagcatttctggctgacatcagacctcagactgatggc
tgtaatggcttgagatacaatctgacagctgacatcattgaatccatcttcagaacatac
cctgcagtgaagcagaagtatagtgaaaatgtgcctcataacctgacggagaaggagttc
tggacccgcttcttccagtcccattattttcacagagaccgcatcaacacaggaacgcag
gatatcttctcagaatgtgccaaacaggacgagaaagggttaaagtctcttgtgactcaa
ggagtcaagaatcctttggttgacctcttgtcgttggaagataaaacattagatgagggt
tatggtatcagcacaacgctaccctcgacctcgaatgcaaacaggacagtgaaggagagc
agcaactctgccatcataaagcggttcaaccatcacagtgccatggtgctggcagcaggc
gcacgcaaaggggagccgccaactgaccaagccagtgagacaagcagcacagacggaaac
tcaagggattcagacttctttcaacctcctgttaagaaggttaaattacaagaagccata
gaatacgaagacctgctaagggaaaacagaccgaaaacagtcgcattaaacctgaagaag
tctgacaggtacgctcacggtcccgtgccacttcagtcccaacagtacacaaccagccag
gatatcatcaactctgtcaactacatccaacacgaaatggccaattacacacccaacctc
actcaggtgttgtccagcacagcagcgagttctgcgattgcagcgctctctccgggaggt
atcctcatgcaggccagtgcacagcaagccataagtcagatggcacccattgagattcaa
ggcgagttgaaacatctttatatggctgctggagagttgctgagacatttctggtcctgt
tttccagtgaatacgccatttttggaggaaaaggtgacgaaaatgaagtcgaatcttgag
agatttcagatgaccaagcttcgtccttttcaggagaaaattcagcgtcaatacttaagt
gtgaatttcacaggacacttggaggacatgctgcagactgcctatagcaagttccacgtc
tggcaaactcgccgaatgatgagaaaaacctga
DBGET
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