Leuresthes tenuis (California grunion): 140307237
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Entry
140307237 CDS
T11698
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
140307237 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ltu03019
]
140307237 (myo5c)
04131 Membrane trafficking [BR:
ltu04131
]
140307237 (myo5c)
03029 Mitochondrial biogenesis [BR:
ltu03029
]
140307237 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ltu04812
]
140307237 (myo5c)
Messenger RNA biogenesis [BR:
ltu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
140307237 (myo5c)
mRNA cycle factors
P-body specific factors
140307237 (myo5c)
Membrane trafficking [BR:
ltu04131
]
Others
Actin-binding proteins
Myosins
140307237 (myo5c)
Mitochondrial biogenesis [BR:
ltu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
140307237 (myo5c)
Cytoskeleton proteins [BR:
ltu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
140307237 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
CCDC89
ERM_helical
T4SS_LegC2C7
AAA_22
IQ_SCN5A_C
AAA_16
nSTAND3
Myosin_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
140307237
NCBI-ProteinID:
XP_072242123
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MALLELYTKYNRVWIPDAEHVWQSAEITRDFNSAETLLELVLEDGTDYHYPVDPSKLQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSESKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQSDNERNYHIFYQMCSCADSPEFKNLRLLSADKFRYTCMGGDITIESVD
DRKDMEETRRTFALLGLKKDFQSDVFQVLAAILHLGNVEFKKLGDEKSSVAPGDHHLEVF
CDLLGVSAKGLERWLCNRRIVLVAETFVKSVSKERAITARDVLAKQIYAHLFDCIINQIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLGAGPLFEKP
RLSSEAFVIQHFADKVEYQCRGFLEKNRDALYEELVDAMRASKFSFLASFFQEEEEQSRA
TSKGIKVKPARPSMKPANKQLRTSVGDKFRSSLSLLMETLNATTPHYVRCIKPNDEKLPF
EYDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSVLMSHLEADLNDKKQTCKN
VLQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQRRKYLRT
REAAIVLQQYLRGQRTVRKTVTAAALKQGWGAVVIQRHWRGYRMRQIYQAVRLASITIQA
FIRGWMARKQYSKMMKEHKALVLQKYARAWLARRRFQTMRRLVINVQLSYRVQQLRKKIE
EQNKENRGLMERLTSLVNSHSQTVDRLHGLEVQLEKSTNLKASLEARERKAKEDASLTIA
QLQKEIEALNLEKQNLEKKLEASIREAKESFDQVRRNLLEEKESEARLRKIAENNIEIQR
KDHETEVETLKEEIKRLKEERVSLQRKVEEGAQVNSDLQEQVIQLTKHVKAIPELRRDLN
NLQNQRNNVDRKMKQQSEQARAKMKEIARQLIGGVVEEEVLLGLTPDDSEKISEPEDLLA
AFEGLQKATRILENHQREQRENYETRVEGLTLKVDHLQNENSKLQNLFQEKSNVNEDIRQ
EVSRLSSENSVIPELKLQVSELQRQKQELEAHVNDQSRELAEKNQEITHTLQRRITEETS
QRRYFEEKAKELEEAKEELECRVDDLEEENDHLKRQQLMEGEVKRKLREETSQLAAVNMD
FEELLDQKDRLIKKLQRQIKSLETSQKAKQNSTSAIPKEYLGMLEYRREDEARLIQNIVL
DLKPKGVVVNMIPSLPAYILFMCVRHADYLNDEAKLKSLMNAIISAVKKVIVGHHKDLEL
LSFWLSNTYQLLNCLKQYSGEEEFLKQSTPRQKKNCLQNFDLSEHRQILSDLAIQIYHQF
ITVMQKTLTPTIVPGMLEHESLQGISSMKPTGLRKRSNSTYEDAEAYTISSILELLSVFH
SNMSHHGMDQGLIKQAIKQLFFIVGAITLNHIMLRKDMCSCRKGMQIRCNISYLEEWLKE
KELQSSHAIDTLRPLTQAAWLLQVNKSTDDDAKEIIDKCPELNPVQIVKILNSYTPIDDF
EKRVTSAFVRKVQSLLQDHEGSTQLMLDTDYRFQVTFPFCPSSQALELLQVPSSLYLDFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggagctgtacacgaagtataacagagtgtggatcccagatgcagaacat
gtgtggcaatcagccgaaattacaagggacttcaattctgcagaaactcttcttgagcta
gtactggaagatggaactgactaccactaccccgttgatccatctaaactgcaactccct
cctcttcgaaacccagacatcttggtgggagagaacgacctgacagcgctcagctacctg
catgagcctgcagttctgcacaacctcaaagtgcgattcgtcgaatccaggatcatctat
acctactgtggtatcattctggtggctgtaaatccttataaacagcttcatatctatgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccataagaaccagtccatcatt
gtcagtggggaatctggggccggcaaaacggtctccgctcggtatgctatgaggtacttt
gctgtcgtgagcaaatctgaaagtaaaactcgagttgaagacaaagtgctggcttccaat
ccaataacagaggcaataggaaacgccaaaaccacccggaatgacaacagcagccgcttt
ggaaaatacacagagatcagctttgacaggaggtaccggatcattggagcgaacatgagg
acctacctgttagagaaatccagagtcgttttccagtccgacaacgagcgtaattatcac
atattctaccaaatgtgttcctgtgcagactcgccggagttcaagaacctgagactgttg
agcgcagataagttcaggtacacttgcatgggcggtgacataaccatcgaaagtgtagat
gacaggaaggacatggaagagactcgacggaccttcgcgctgctggggttgaagaaggac
tttcagtcagatgtgtttcaagtcctggcagcaattcttcatttggggaatgtcgaattc
aaaaagttgggagatgaaaaatcatcagttgctcccggcgatcatcacctggaggtcttc
tgtgatttgttgggtgtaagcgccaaggggctggagcgatggctgtgtaatcggaggatt
gttctggtggctgaaacttttgtaaagtcagtgtccaaggagcgggcgataactgccaga
gatgttttggctaagcagatctatgcccatctgtttgactgcatcattaaccagatcaac
acagcactgcaggttcctggaaagcagcacgctttcataggtgttctggacatttacggc
tttgaaacgtttgacatcaacagctttgaacagttttgtatcaactatgcaaacgaaaag
ctccagcagcagtttaacttgcatgtgttcaagctggagcaggaggagtacatgaaggag
gacatcccatggacgctgattgacttctatgacaatcagcctgttattgacctgattgag
gcaaagatggggatccttgacttgcttgatgaagagtgtttatttcctcaaggcacagac
cagagctggttgcagaagctgtttaactaccttggtgccggccctctgtttgagaagccc
aggttatccagtgaggcatttgtgattcaacactttgcagacaaggtggaatatcagtgc
agaggttttcttgagaagaatcgagatgctctctatgaagagctggtggatgcaatgaga
gccagtaagttttcatttctggccagctttttccaagaggaggaggagcaaagcagggcg
accagtaagggcatcaaagtgaagccggccaggccttcgatgaaaccagccaataagcag
ctgaggacttctgtgggagataagttccgcagttcgctttctttactgatggagacgctg
aacgccaccacccctcactatgtgcgctgcattaagcctaatgatgaaaagctccctttt
gaatacgactccaggagagtagtgcagcagctgcgagcctgtggcgtccttgaaactatt
cgcatcagtgctcaaagctatccctccagatggacatacattgagttttacagccgatac
agtgtccttatgtcacacctggaggcagacctcaatgacaagaaacaaacctgcaaaaat
gtgctgcagaggctgattcaggactctaaccagtacaagtttggccgcacaaagatcttc
ttccgagccggtcaggttgcttatttggagaagctgcgtctggatcgacttcgtggagcc
tgtgtgaccatccagaaacacgtccgtgggtggagccagaggaggaagtacctgagaacg
agagaggcggccattgtgctccaacaatacctaagaggacagaggacagtccgcaaaaca
gtgactgctgcagcgctaaagcagggctggggagcagtggtgatccagagacactggaga
ggttaccgcatgagacagatctaccaggcagtccgtctggcctccatcaccatccaggct
tttatacgcgggtggatggcacgtaaacagtacagcaagatgatgaaagagcacaaagct
ctggttttacagaagtacgctcgagcgtggctggcacgacgccgatttcaaaccatgcgt
cggctggtaatcaatgtccagctttcctacagggtgcagcagctcaggaagaagatcgaa
gagcagaacaaagagaatcggggattgatggaaagactgaccagtttggtgaactctcat
tctcaaaccgtggacagacttcatggcctggaggtgcagctggaaaaatcaaccaacctg
aaagcgtcactggaagcaagggagagaaaagcaaaggaagacgctagtttgacaattgcg
cagcttcagaaggagatagaagcacttaaccttgaaaagcagaacctggagaaaaagctt
gaggcttccatcagagaggccaaagagagctttgatcaagtaagaaggaatcttctggaa
gagaaagagagtgaagcaaggcttagaaagattgccgagaacaacattgaaatccagaga
aaggaccacgagactgaggtggaaactcttaaagaagagataaagagattgaaagaggag
cgagtgagtctgcagaggaaggtagaggagggggcgcaggtgaactctgacctgcaggaa
caggtcattcagctcaccaagcatgtcaaggccatcccagagctgcgcagagacctgaac
aacctgcaaaatcagaggaataacgtggaccgaaagatgaagcaacagtcagaacaagca
agagccaaaatgaaggagattgctcgacagcttattggtggtgttgttgaagaggaggta
cttttgggactaactccagacgactctgagaagatttctgaaccggaagatttgctggca
gcctttgaaggccttcagaaagctacaaggattctggaaaaccaccagagggagcagagg
gagaactacgagactcgagtggagggcttgacactgaaagtggaccaccttcaaaatgag
aacagcaagctgcaaaacctgttccaggagaaaagcaatgtcaatgaagacattcgtcaa
gaagtttctcggctcagcagtgagaactcggttataccagagctgaaactgcaggtttcc
gagctgcagagacaaaagcaagagctcgaggcccacgtcaatgatcagagcagagagtta
gcagaaaaaaaccaggagatcactcacactcttcagaggaggattacagaagagacctca
cagcgcaggtattttgaggagaaagccaaagagctggaagaggcaaaggaggagcttgaa
tgtagagtagacgacctggaagaggagaacgatcacttgaagagacaacagctgatggaa
ggggaagtgaagaggaaactgagagaggagacatcacagttagctgctgtgaacatggac
tttgaagagctgcttgaccagaaagacagattaataaagaaactccagcgccaaatcaag
agccttgaaacatcacagaaagcaaaacaaaactctacctctgccatccctaaagaatat
ctcggcatgttggagtacaggagagaagacgaagccaggctcattcaaaacatcgttctg
gacctgaaaccaaaaggtgtggtggtcaacatgatccccagcctgccagcttacatcctc
ttcatgtgtgttcgccatgctgactacctgaacgatgaagccaaactcaagtcccttatg
aatgcgatcatcagtgctgttaaaaaggtcatcgtgggtcaccacaaagacttggagttg
ttgtccttctggctctcaaacacataccagctgctcaactgtctgaagcagtacagtggg
gaagaggagttcctgaaacaaagtacccctcgtcagaaaaagaactgcctgcagaacttt
gatttgtccgaacacagacagattctcagtgacctggccatacaaatttaccatcagttc
atcacagtcatgcagaaaactcttactcccaccattgtacctggtatgctggagcatgag
agtttacaggggatttctagcatgaagccaacgggcctcaggaagcgttccaacagtact
tatgaggacgcagaggcatacaccatctcctccatcctggagctgctctctgtcttccat
tccaacatgagccaccatggcatggaccagggcctcatcaaacaagccatcaagcaactg
ttttttatcgtgggtgccatcaccctcaaccacatcatgctccgcaaagacatgtgctcc
tgcaggaaaggaatgcagatcagatgcaacatcagttatctggaggagtggctgaaggag
aaggaacttcaaagctctcatgctattgacactctgaggccgctgactcaggctgcctgg
ctactgcaagtcaataaatccactgatgacgacgccaaagagatcattgacaaatgccct
gaactcaaccctgttcagattgtcaagatcttgaattcctacacacctatagatgacttt
gagaaaagagtgacctcagcatttgtccgcaaagttcagtcattacttcaagatcatgaa
gggtccacgcagctgatgctggatacagattatcgtttccaggtgacgtttcctttctgc
ccgtcctcacaggctctggagctgctgcaggtcccgagcagcctctatctggacttccta
accaggatctga
DBGET
integrated database retrieval system
