Leuresthes tenuis (California grunion): 140307650
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Entry
140307650 CDS
T11698
Symbol
bmal1a
Name
(RefSeq) basic helix-loop-helix ARNT like 1a isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
ltu Leuresthes tenuis (California grunion)
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ltu03000
]
140307650 (bmal1a)
Transcription factors [BR:
ltu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140307650 (bmal1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
bHLH_IRO3
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
bHLH_SAC51
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
140307650
NCBI-ProteinID:
XP_072242722
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEGDDFNTDAVMNICDDLMADQRMDISSTMTDFMSPGSTDLISSSISTPGMDYTRKRKGS
TTDYQIDGFSFDDMDPDKDKLGSDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT
CNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFV
VGCDRGKILFVSESVYKILNYTQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLID
AKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCT
IHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPSPADIRVKPTEYV
SRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDISHLAECHRQVLQMREKINT
NCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCPVMEGSDYPQSAASPQSM
DSVLTSEGGGRRALQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNI
TSTPPPDTCSPGGKKIQNGGTPELPSTGIIPGPDSVGYPYSNQSIMSDNSHLSIDIMDDP
GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagatgattttaacacagacgctgtgatgaacatctgtgatgacctaatggca
gaccaacggatggacatctcgtctactatgactgacttcatgtcccccggctccactgac
ctcatctccagctccatcagcacccctggcatggactacacccgcaagaggaagggcagc
accaccgactaccaaattgatggcttctcatttgatgatatggacccagataaagataaa
ttggggagtgaccaacagggcaggattaagaatgccagggaggctcacagccagatcgag
aagcgccgcagggacaagatgaacagcttcatcgacgagctggcgtcactggtgcccacc
tgtaacgccatgtcccgcaagctggataagctcacagtgctgcgcatggctgtgcagcac
atgaagacactccgaggtgcagccaacccgtacacagaagcaaactacaagccttccttc
ctctcagacgatgaactgaagcatttgatactaagggctgctgatggtttcctttttgtg
gttggctgcgatcgtggcaaaatcctctttgtttctgaatccgtctacaagattctcaac
tacacccagaatgacctcataggtcagagcctgtttgactaccttcatcccaaggacatc
gcgaaagtcaaagagcagctgtcgtcctcggatacagccccacgagagaggctcattgat
gccaaaaccggtcttcccgtgaagacggacatcacccctggtccatctcgactctgttct
ggagccagacggtcatttttctgcaggatgaagtgcaacaggccttctgttaaagtagag
gacaaagacttcccctccacctgctctaagaaaaaagctgaccgtaagagcttctgcacc
atccacagcacaggctacctgaagagctggccgcccactaagatggggctcgacgaggac
aacgagcccgacaatgagggctgcaacctgagctgcctggtagccatcggccgcctgcac
ccccatatcgtcccccagcccagtccggctgacatcagggtgaagcccacggagtacgtc
tcccggcacgccatcgacggcaagttcgtcttcgtcgaccagagagccacagctatccta
gcatacctgccccaagagctgctcggaacctccttctacgagtatttccaccaggacgac
atcagccacctggcagagtgtcacagacaagtgctgcagatgagagagaagatcaacacc
aactgttacaaatttaaaatcaaagacggctcctttattacgttgaggagcagatggttc
agctttatgaacccctggaccaaggaggtggagtacatcgtctctaccaacactgttgtc
tcgtgtcctgtaatggaaggatcagactatcctcaatctgctgcctctcctcagagtatg
gacagtgttctgacctctgaaggtggagggagacgggcgctgcagaccgtgcctggcatc
cccgggggcacgagagcaggagctgggaagattggacgcatgatagccgaggaggtgatg
gagattcagaggattcgaggctcgtccccctccagctgtggctccagcccgctgaatatt
accagcacccctccacctgacacctgctcccccgggggcaagaagattcagaatggtggg
acgcccgagctgccgagcacggggattattcccggaccggattctgtaggctacccttac
tccaaccagtccatcatgagtgacaactcccacctgagcatagatatcatggacgacccc
ggctccagcagccccagcaacgacgaggcggccatggcggtcatcatgtccctgctggag
gcggacgccggcctgggaggccccgtcgacttcagcgacctgccctggccattgtga
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