Leuresthes tenuis (California grunion): 140307682
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Entry
140307682 CDS
T11698
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140307682 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ltu03021
]
140307682 (sf3b3)
03041 Spliceosome [BR:
ltu03041
]
140307682 (sf3b3)
03036 Chromosome and associated proteins [BR:
ltu03036
]
140307682 (sf3b3)
Transcription machinery [BR:
ltu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140307682 (sf3b3)
Spliceosome [BR:
ltu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140307682 (sf3b3)
Complex B
140307682 (sf3b3)
Complex C
U2 SnRNP specific factors
140307682 (sf3b3)
Chromosome and associated proteins [BR:
ltu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
140307682 (sf3b3)
TFTC complex
140307682 (sf3b3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
140307682
NCBI-ProteinID:
XP_072242766
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
VVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGDKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYSPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGATLDQVQLEQNEAAFSVAVCRFTNTG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLTGGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIYTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEIIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacatcaccctgcagcgcgccactggcatcacccatgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtttccagaggaaagatcctggaatta
ttgcgacctgatgccaacacaggaaaggtgcacactcttctcacagtcgaagtgtttggt
gttgtgagatctctgatggctttcaggctcactggaggaaccaaagattacattgtagtg
ggaagcgacagtggtcgtatcgtcatcctggagtatcatccatcaaaaaacatgtttgag
aagatccatcaggagacgtttgggaaaagcggctgccggcgtatcgtccccggacagttc
ctggctgttgaccctaaaggcagagctgttatgatcggagcaatagagaaacagaagctg
gtttatattctgaacagagatgctgctgcgagactgaccatctcctctcccctggaagcc
cacaaagcaaacacactggtctatcatgtagttggagtggatgttggctttgaaaatcca
atgtttgcctgcttagaaatggactatgaggaagcagacaatgacccaacgggagaagcc
gctgcaaacacacaacagacactcaccttttatgagctggatcttggcttgaatcacgtt
gtccgaaagtacagcgaggctttggaagagcatggaaacttcctcataactgttcctggt
ggttcagatgggcccagtggagttctgatctgctcggaaaactacatcacttacaagaat
tttggagaccagcctgacatccgctgtcccatcccacggcgcaggaatgacctggacgac
ccggagcgcggcatgatatttgtctgttcagccacccacaagaccaagtccatgttcttt
ttcctggctcagactgagcagggagacatctttaaggtcactctggaaacagatgaagaa
atggtcacagaaatcagacttaagtactttgacacaatccccgtggcaacagccatgtgt
gtcctgaagacaggcttcctgtttgtgtcctcagagtttggaaaccactacctttatcag
atcgctcatttgggtgacgatgatgaagagccagagttctcgtctgcgatgccattggag
gagggagacaccttcttcttccagccccgcccactcaaaaacttggtgctggtggatgaa
caagagaacctgtcacccatcatgtcatgtcaaattgctgatttggcaaatgaagacaca
cctcagctgtatgtggcctgtggacgagggcccaggtctactcttcgggtccttcgacac
ggactggaggtttcagagatggccgtgtctgagctgcctggaaaccccaatgctgtgtgg
actgtacgcagacacatagaagatgagtttgatgcctacatcatcgtgtcgttcgtcaac
gctactctggttctttccattggggagacggtagaggaagtgacagattctggatttctg
ggaaccacgcccactctctcctgctctcttcttggtgaggatgcccttgtgcaggtttac
ccggatggtatccgccacattcgagcagacaagcgtgtgaatgagtggaaaactcctggt
aaaaaaacaatcgtccgctgcgctgtgaaccagcggcaggtggttatcgccctgactgga
ggggaactcgtgtactttgagatggacccgtccggccagttgaatgagtacacggagcga
aaggagatgtctgcagatgtggtttgtatgagcctggccaacgtcccacctggtgagcaa
cgctcccgcttcctggctgttgggctggtcgacaacaccgtccgaatcatctccctggac
ccttcggactgtctacaaccgctgagtatgcaggcccttcctgcccagccagagagtctg
tgtatcgtagagatgggaggcgttgagaagcaagatgaacttggtgataagggaaccatc
ggcttcctctacctcaacatcgggcttcagaacggcgtgctgctgaggaccgtcttggac
cctgtgaccggtgacttgtctgataccagaacacgatatctggggtcacgacctgtcaaa
ctgttcagagtcaggatgcaggggcaggaagccgtgctggccatgtccagccgttcgtgg
ctcagctactcttaccagtcccgcttccacctcacccccctctcgtatgaaactctggag
tatgcctctggctttgcctctgagcagtgcccggaaggcattgtagcgatctccaccaac
acactgagaatcttggctttggagaaacttggagccgtcttcaaccaggtggcctttcct
ttgcagtacagtccaaggaagtttgtaatccatccagagaccaacaacctcattttgatt
gagactgaccacaacgcctacacggaggcgaccaaagctcagcgaaagcaacagatggct
gaggagatggtggaggccgctggtgaggacgagcgagagctggcagctgagatggccgcc
gcgttcctcaacgagaatctcccagaagccatttttggcgcacctaaagcgggagctgga
cagtgggcctctctggtgcgactggtcaaccccatacagggtgcaacactggatcaggtg
cagctggagcagaacgaagctgcattcagtgttgcagtgtgtcgcttcaccaacactgga
gatgattggtatgtcctggtgggcgtcgccagagacatgatcctcaaccccaggtccgtg
ggcggcggctttatctatacctatcggctcaccggtggaggggagaagctggagtttgtg
cacaagaccccagtggaggacgtgccgttggccatcgccccgttccagggacgagtcttg
gttggagttggaaagctgctgagaatctacgatttgggcaaaaagaagctgctccgcaag
tgtgagaacaagcacgttcccaacctggtgactggcatctacaccatcggccagcgtgta
atcgtgtccgatgttcaggagagtctcttttgggtccgttaccggcgtaacgagaaccag
ctgatcatctttgcggacgacacgtatccccgctgggtgacgacggcctgtctgctcgac
tatgacaccatggcttctgctgacaagtttggcaacatcagcattgtgcgtcttcccccc
aacaccagtgacgatgtggatgaagaccccacaggaaacaaagccttatgggacagaggt
ctccttaatggagcatcacagaaggctgaaattatagtgaactaccatgtaggagagacc
gtgttgtcgctccagaaaaccactctgatccccggaggttcagagtccctggtctacacc
acactgtccggcggcatcggtatactggtcccattcacttcacacgaggatcacgacttc
ttccaacatctggagatgcatatgcgctccgagttccctcctctctgtggcagagaccat
ctcagcttcaggtcctactacttcccagtcaagaatgtgattgatggagatctgtgtgag
cagttcaacagcatggatccacacaagcagaaaagtgtggcggaggagctggacaggacg
ccaccggaagtctccaagaagctggaggacattcgcactcgttacgctttctaa
DBGET
integrated database retrieval system
