Leuresthes tenuis (California grunion): 140309944
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Entry
140309944 CDS
T11698
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu03013
Nucleocytoplasmic transport
ltu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140309944 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
140309944 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ltu03019
]
140309944 (thoc5)
03041 Spliceosome [BR:
ltu03041
]
140309944 (thoc5)
Messenger RNA biogenesis [BR:
ltu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140309944 (thoc5)
Spliceosome [BR:
ltu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140309944 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
140309944
NCBI-ProteinID:
XP_072244125
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRSEGGTAEIKRGRGELDQHDVRVYNEEVELESRDPEEDHLQYKKSC
ENLAILMSEIQKLKASGAKEGCAEVEQKRMQSCIHFMNLKRLNRLAHMQLKKGRDETHEA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQEAPQEISRPNLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQATKEKIQKSIEVKKEHLRSLQPGLNAIMQA
SVPVQDYLSMPFEQIQKQAEIARHLPPPLYVLFVQANAYGQACDKNLSVSISGDVDEARA
LSKPPDDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
ILHLYFYYLMNLNIMTVKTKVSTFTEVITAISAGELLKSDTLLSCLYTSDQGRETPNPAN
RYQFDKVGIVSFSDYVEELGYPFMWVQNLGGLQFPSEGSEGVLVGSSLSANHMENTMKLL
RGRVQSRLALQKQFASIENSIIPVSSDCQHLFPAKILSRLARWTTISHQEYMDLPYTRHV
TDAGLAKETDLYFMAVLERGTARLQAAVVLSPRYPEIPPLFSLSLSWKGECSGRTDDNLR
AMESEINVFKNELQGPRPGHQLLTNQIQRLCVCMDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacgcactaaagaagcggaagtcgaaggttcttcgcagtgaaggaggaacc
gcggagataaagcggggtcgcggggagctggaccagcatgatgtgcgtgtctacaatgag
gaggtggagctggaaagcagggatcctgaagaggaccacttgcagtacaaaaaatcatgt
gagaacctggctatactcatgagtgagatccagaagctgaaagccagtggagctaaggag
gggtgtgcagaggttgagcagaaacgtatgcagagctgcatccacttcatgaatctgaaa
agactcaaccgtctggctcacatgcagctgaagaaaggcagagacgagacgcacgaggcg
aaacagaaggtcgacgtgttgcatctacagcttcaaaacctcctgtatgaagttatgcat
cttcagaaggaaatcagcaagtgtctagagttcaagtctaaacacgaggaaatcgacttg
gtgagtgaggaagagttttatcaggaggccccacaggagatttccagacccaacctcacc
aaaaatgatcctcaccagctcacgctggcacgactggactgggagctcgaacagaggaag
aggttggcagagaaatacaaggagtcacaggcaacaaaggagaaaattcagaagagcatt
gaggtgaagaaggagcacctgagaagcttgcagccaggactcaatgcaataatgcaggca
tctgtcccagtgcaggactacctgtccatgccctttgaacagattcagaaacaggcagag
attgcccgccacctgcctccacccctctatgtcctgtttgtccaagcaaatgcatatggc
caggcctgcgacaagaatctgagtgtgtcaatcagtggtgatgtggatgaggccagggca
ctgtccaaaccgccagatgattcccaagatgatgagagtgattcagatgcagaggaggaa
caagagaaaacgaagagaagaaggccaactaccggtggccagctggatgacaaaaggcga
gagatgctgaaaaggcatcctctgtctctttgcttggatcttaagtgtaaagatggcagc
attctccatctctacttctactacctgatgaatctgaacattatgactgtcaagactaaa
gtctccaccttcacagaagtcatcactgccatcagtgcaggggagcttcttaaatcagac
actctgctcagttgtctctacaccagtgaccagggaagagaaactcccaatcctgctaat
cgctatcagttcgataaagtcgggattgtttccttttctgattatgtggaggagctggga
tatcccttcatgtgggtccagaatctcggaggacttcagtttcctagtgaaggctcagag
ggtgtccttgtgggcagttctctgagcgccaaccacatggagaacaccatgaagctgctg
agagggcgagtccagtcccgcttggccctgcagaaacagtttgcctccatagagaacagc
atcatcccagtttccagtgactgtcagcacctctttcctgccaagatcctctcccgttta
gcacgttggaccaccatcagtcatcaggagtacatggatctgccgtatacacgtcatgta
actgacgctgggctggcgaaggagactgatctgtactttatggcagtgcttgaaagaggc
acagctcgtctccaggctgcagtggtgctgagtccccgttacccagagatccctcccctg
ttctccctctctctcagctggaagggagagtgcagcggacgcaccgatgacaacctcaga
gctatggagagtgaaatcaatgtgttcaaaaatgaactgcaaggaccacgtccaggacac
cagctgctgaccaatcagatacagcgcctctgcgtctgcatggatgtgtatttggagaca
gaaggacaggacgacagtgtggaaggacctcgtgagttcccccgagagaaaatgtgcctg
cgcactgtcaggggtccgaatcgcctgaaaccattcaagtacaaccatcctcagggcttc
ttcagtcaccgctaa
DBGET
integrated database retrieval system
