Leuresthes tenuis (California grunion): 140309947
Help
Entry
140309947 CDS
T11698
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04137
Mitophagy - animal
ltu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140309947 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
140309947 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ltu03019
]
140309947 (vcp)
03009 Ribosome biogenesis [BR:
ltu03009
]
140309947 (vcp)
04131 Membrane trafficking [BR:
ltu04131
]
140309947 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ltu04147
]
140309947 (vcp)
Messenger RNA biogenesis [BR:
ltu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140309947 (vcp)
Ribosome biogenesis [BR:
ltu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
140309947 (vcp)
Membrane trafficking [BR:
ltu04131
]
SNARE
SNARE associated proteins
Others
140309947 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140309947 (vcp)
Exosome [BR:
ltu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140309947 (vcp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
NB-ARC
nSTAND_NTPase5
TsaE
AAA_24
ResIII
NACHT
SLFN-g3_helicase
Viral_helicase1
Zot
Motif
Other DBs
NCBI-GeneID:
140309947
NCBI-ProteinID:
XP_072244130
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLATAILKQKNRPNRLVVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSTAGG
SGPAHGTGGTGSGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggaggggaatccaaaaatgatgatctagcaactgctattctgaaacaaaag
aacagacccaacagactggtggttgatgaatccatcaatgaagacaacagtgttgtctct
ctctctcagaccaagatggacgagctgcagctcttccgtggagacacagtgctgatgaag
ggtaaaaagaggcgggagactgtgtgcatcgtgctgtctgatgacacctgttctgatgaa
aaggttcgcatgaacagggtggtccgcaacaacctgagggtccgtcttggtgatgtcatc
agcattcagccatgtcccgatgtgaagtatggaaagaggatccatgtcctcccaatagat
gacacagtagagggaattactggcaacctgtttgaggtctacctgaagccatacttccta
gaggcttacaggccaatccgcaaaggtgacattttcctggtcagaggaggcatgcgtgct
gtggagttcaaggtggtagagaccgacccttccccttactgcatcgttgctcctgacacc
gtcattcactgcgagggtgagccaatcagaagagaggatgaggaggagtccctgaacgag
gtcggctacgatgatattggaggagtaaggaagcagttggcgcagattaaggagatggtg
gagctgcccctcagacaccctgcactgtttaaggctataggagtcaagcccccacgtgga
atccttctctatggaccccctggaactggaaaaactttgattgccagagctgtggccaat
gaaacaggagctttcttcttcctgattaatggtcctgagattatgagtaagctggcagga
gagagcgagagtaacctgagaaaggcctttgaggaagctgagaaaaatgctcctgccatc
atctttattgatgaacttgatgcaattgctccaaagagagagaagactcacggagaggtg
gagaggcgcatcgtttctcagctgctgacacttatggacggcctgaaacagagagctcat
gtcatcgtcatggctgccaccaatagacccaacagcatcgatccagccctcaggagattt
gggcgttttgatagggaggtggacattggcatccctgatgccactggcaggttggaaatc
ctccagattcacaccaagaacatgaaactggctgacgatgttgacttggaacaggttgcc
aatgagactcatgggcatgtgggtgcagatctggctgctctctgctctgaggctgctctc
caggccatcaggaagaagatggacctgatcgaccttgaggatgagaccatcgatgctgaa
gtcatgaactctcttgccgttaccatggatgacttcaagtgggctctgagccagagcaac
ccatcagctctgagggagacagttgttgaggttcccaacattacctgggatgatattgga
ggcctggaggatgttaagagggagctgcaggagttggtgcagtaccctgtggagcaccca
gacaagttcctcaagtttggcatgaccccatccaaaggtgtgctgttctacggtccccct
ggttgtggtaagaccctcctggccaaagccatcgccaatgagtgccaggcaaatttcatc
tccatcaaaggacctgagctgctcaccatgtggtttggagaatctgaggccaatgtcaga
gagatctttgacaaggctcggcaggctgccccatgcgttctcttctttgatgagctggac
tccatagccaaagcccgtggcggcaacgttggagatggtggcggagccgccgaccgtgtc
atcaaccagatcctgactgagatggatggaatgtcgagcaagaagaacgtcttcatcatt
ggagccacaaacagaccagacatcattgatcctgccatcctgagacctggccgtctcgat
cagctcatttacatccccctgcccgacgagaagagcaggatcagcatcctgaaggccaat
ctccgcaagagtcccatcagcaaggatgtggacttggacttcctggctaagatgaccaat
ggcttctctggagctgatctcacagagatctgccagcgggcgtgtaaactggccatcaga
gaaagcattgagaatgagatccgcagagagagggagaggcagaccaatccttcagccatg
gaggtggaggaggatgatcctgtgccagagatcaggaaggaccacttcgaagaagcaatg
cgatttgctcgtcgctctgtcagtgacaatgatattcgcaaatatgagatgtttgctcag
actctgcagcagagccgtggctttggcagcttcaggtttccctccagtactgcaggtggc
agtggaccagctcacggcacaggtggaactggtagtggcccagtgttcaatgaagataac
gatgatgatctttatggataa
DBGET
integrated database retrieval system
